RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 PLP1P60201 277 aa12.62□□□□□ -0.39
CHRFAM7A-203ENST00000401522 TSKUQ8WUA8 353 aa12.62□□□□□ -0.39
CHRFAM7A-203ENST00000401522 TMEM68Q96MH6 324 aa12.62□□□□□ -0.39
CHRFAM7A-203ENST00000401522 C7orf69Q9H7B7 122 aa12.62□□□□□ -0.39
CHRFAM7A-203ENST00000401522 LPAR2Q9HBW0 351 aa12.62□□□□□ -0.39
CHRFAM7A-203ENST00000401522 NRN1Q9NPD7 142 aa12.62□□□□□ -0.39
CHRFAM7A-203ENST00000401522 MRPL27Q9P0M9 148 aaKnown RBP12.62□□□□□ -0.39
CHRFAM7A-203ENST00000401522 SIGLEC9Q9Y336 463 aa12.62□□□□□ -0.39
CHRFAM7A-203ENST00000401522 ARHGAP32A7KAX9 2087 aa12.62□□□□□ -0.39
CHRFAM7A-203ENST00000401522 ZNF324O75467 553 aaPredicted RBP12.62□□□□□ -0.39
CHRFAM7A-203ENST00000401522 IGLV1-47P01700 117 aa12.62□□□□□ -0.39
CHRFAM7A-203ENST00000401522 IGHV4-31P0DP07 118 aa12.62□□□□□ -0.39
CHRFAM7A-203ENST00000401522 KRTDAPP60985 99 aa12.62□□□□□ -0.39
CHRFAM7A-203ENST00000401522 GNG5P63218 68 aa12.62□□□□□ -0.39
CHRFAM7A-203ENST00000401522 C1orf122Q6ZSJ8 110 aa12.62□□□□□ -0.39
CHRFAM7A-203ENST00000401522 NUP35Q8NFH5 326 aa12.62□□□□□ -0.39
CHRFAM7A-203ENST00000401522 OR4B1Q8NGF8 309 aa12.62□□□□□ -0.39
CHRFAM7A-203ENST00000401522 RCHY1Q96PM5 261 aa12.62□□□□□ -0.39
CHRFAM7A-203ENST00000401522 FAM103A1Q9BTL3 118 aaKnown RBP12.62□□□□□ -0.39
CHRFAM7A-203ENST00000401522 OTOGQ6ZRI0 2925 aa12.61□□□□□ -0.39
CHRFAM7A-203ENST00000401522 RBP4P02753 201 aa12.61□□□□□ -0.39
CHRFAM7A-203ENST00000401522 NBEAP1P0C6P0 100 aa12.61□□□□□ -0.39
CHRFAM7A-203ENST00000401522 ZNF705AQ6ZN79 300 aaPredicted RBP12.61□□□□□ -0.39
CHRFAM7A-203ENST00000401522 ATP5L2Q7Z4Y8 100 aa12.61□□□□□ -0.39
CHRFAM7A-203ENST00000401522 KIR3DL3Q8N743 410 aa12.61□□□□□ -0.39
CHRFAM7A-203ENST00000401522 GPR82Q96P67 336 aa12.61□□□□□ -0.39
CHRFAM7A-203ENST00000401522 CLEC7AQ9BXN2 247 aa12.61□□□□□ -0.39
CHRFAM7A-203ENST00000401522 INSIG2Q9Y5U4 225 aa12.61□□□□□ -0.39
CHRFAM7A-203ENST00000401522 IGHV1-3A0A0C4DH29 117 aa12.6□□□□□ -0.39
CHRFAM7A-203ENST00000401522 PGPA6NDG6 321 aa12.6□□□□□ -0.39
CHRFAM7A-203ENST00000401522 DIRC3C9JPN6 131 aa12.6□□□□□ -0.39
CHRFAM7A-203ENST00000401522 M0R1W7 72 aa12.6□□□□□ -0.39
CHRFAM7A-203ENST00000401522 GP9P14770 177 aa12.6□□□□□ -0.39
CHRFAM7A-203ENST00000401522 PMCHP20382 165 aa12.6□□□□□ -0.39
CHRFAM7A-203ENST00000401522 SLAQ13239 276 aa12.6□□□□□ -0.39
CHRFAM7A-203ENST00000401522 TDRG1Q3Y452 100 aa12.6□□□□□ -0.39
CHRFAM7A-203ENST00000401522 C5orf17Q8NAS9 161 aa12.6□□□□□ -0.39
CHRFAM7A-203ENST00000401522 BLNKQ8WV28 456 aa12.6□□□□□ -0.39
CHRFAM7A-203ENST00000401522 FMC1Q96HJ9 113 aa12.6□□□□□ -0.39
CHRFAM7A-203ENST00000401522 ATG101Q9BSB4 218 aa12.6□□□□□ -0.39
CHRFAM7A-203ENST00000401522 F11RQ9Y624 299 aaKnown RBP12.6□□□□□ -0.39
CHRFAM7A-203ENST00000401522 CREBBPQ92793 2442 aa12.6□□□□□ -0.39
CHRFAM7A-203ENST00000401522 ZNF469Q96JG9 3925 aaPredicted RBP12.6□□□□□ -0.39
CHRFAM7A-203ENST00000401522 BUB1B-PAK6H3BSN5 160 aa12.6□□□□□ -0.39
CHRFAM7A-203ENST00000401522 TCAPO15273 167 aa12.6□□□□□ -0.39
CHRFAM7A-203ENST00000401522 TOMM40O96008 361 aa12.6□□□□□ -0.39
CHRFAM7A-203ENST00000401522 GATA3P23771 443 aa12.6□□□□□ -0.39
CHRFAM7A-203ENST00000401522 ARF6P62330 175 aa12.6□□□□□ -0.39
CHRFAM7A-203ENST00000401522 PAX8Q06710 450 aa12.6□□□□□ -0.39
CHRFAM7A-203ENST00000401522 KLF5Q13887 457 aaPredicted RBP12.6□□□□□ -0.39
CHRFAM7A-203ENST00000401522 PRR27Q6MZM9 219 aa12.6□□□□□ -0.39
CHRFAM7A-203ENST00000401522 C19orf35Q6ZS72 473 aa12.6□□□□□ -0.39
CHRFAM7A-203ENST00000401522 Q8N976 141 aa12.6□□□□□ -0.39
CHRFAM7A-203ENST00000401522 ONECUT1Q9UBC0 465 aa12.6□□□□□ -0.39
CHRFAM7A-203ENST00000401522 PAM16Q9Y3D7 125 aa12.6□□□□□ -0.39
CHRFAM7A-203ENST00000401522 TEX22C9J3V5 150 aa12.59□□□□□ -0.39
CHRFAM7A-203ENST00000401522 OR2J3O76001 311 aa12.59□□□□□ -0.39
CHRFAM7A-203ENST00000401522 CNTFRP26992 372 aa12.59□□□□□ -0.39
CHRFAM7A-203ENST00000401522 RUSC1-AS1Q66K80 236 aa12.59□□□□□ -0.39
CHRFAM7A-203ENST00000401522 CYB5R2Q6BCY4 276 aa12.59□□□□□ -0.39
CHRFAM7A-203ENST00000401522 PPP1R27Q86WC6 154 aa12.59□□□□□ -0.39
CHRFAM7A-203ENST00000401522 C18orf32Q8TCD1 76 aa12.59□□□□□ -0.39
CHRFAM7A-203ENST00000401522 TMEM190Q8WZ59 177 aa12.59□□□□□ -0.39
CHRFAM7A-203ENST00000401522 NEU1Q99519 415 aa12.59□□□□□ -0.39
CHRFAM7A-203ENST00000401522 RNF5Q99942 180 aa12.59□□□□□ -0.39
CHRFAM7A-203ENST00000401522 HIF1ANQ9NWT6 349 aa12.59□□□□□ -0.39
CHRFAM7A-203ENST00000401522 ZNF492Q9P255 531 aa12.59□□□□□ -0.39
CHRFAM7A-203ENST00000401522 RNF114Q9Y508 228 aa12.59□□□□□ -0.39
CHRFAM7A-203ENST00000401522 TGFAP01135 160 aa12.58□□□□□ -0.39
CHRFAM7A-203ENST00000401522 CT83Q5H943 113 aa12.58□□□□□ -0.39
CHRFAM7A-203ENST00000401522 RBM14Q96PK6 669 aaKnown RBP12.58□□□□□ -0.39
CHRFAM7A-203ENST00000401522 MLST8Q9BVC4 326 aa12.58□□□□□ -0.39
CHRFAM7A-203ENST00000401522 SIRPDQ9H106 197 aa12.58□□□□□ -0.39
CHRFAM7A-203ENST00000401522 HIGD1AQ9Y241 93 aa12.58□□□□□ -0.39
CHRFAM7A-203ENST00000401522 FLNAP21333 2647 aaKnown RBP12.58□□□□□ -0.4
CHRFAM7A-203ENST00000401522 CYSRT1A8MQ03 144 aa12.58□□□□□ -0.4
CHRFAM7A-203ENST00000401522 HIGD1CA8MV81 97 aa12.58□□□□□ -0.4
CHRFAM7A-203ENST00000401522 SMAD7O15105 426 aaKnown RBP12.58□□□□□ -0.4
CHRFAM7A-203ENST00000401522 GDF5OSQ5U4N7 250 aa12.58□□□□□ -0.4
CHRFAM7A-203ENST00000401522 NIT1Q86X76 327 aa12.58□□□□□ -0.4
CHRFAM7A-203ENST00000401522 SRSF8Q9BRL6 282 aaKnown RBP12.58□□□□□ -0.4
CHRFAM7A-203ENST00000401522 RPP21Q9H633 154 aaKnown RBP12.58□□□□□ -0.4
CHRFAM7A-203ENST00000401522 SOX21Q9Y651 276 aaPredicted RBP12.58□□□□□ -0.4
CHRFAM7A-203ENST00000401522 TEX15Q9BXT5 2789 aa12.58□□□□□ -0.4
CHRFAM7A-203ENST00000401522 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.57□□□□□ -0.4
CHRFAM7A-203ENST00000401522 A0A1B0GXF2 115 aa12.57□□□□□ -0.4
CHRFAM7A-203ENST00000401522 LTAP01374 205 aa12.57□□□□□ -0.4
CHRFAM7A-203ENST00000401522 PRTN3P24158 256 aa12.57□□□□□ -0.4
CHRFAM7A-203ENST00000401522 RPEQ96AT9 228 aa12.57□□□□□ -0.4
CHRFAM7A-203ENST00000401522 Q9H3A6 140 aa12.57□□□□□ -0.4
CHRFAM7A-203ENST00000401522 TMEM14CQ9P0S9 112 aa12.57□□□□□ -0.4
CHRFAM7A-203ENST00000401522 ZANQ9Y493 2812 aa12.57□□□□□ -0.4
CHRFAM7A-203ENST00000401522 TCRAP04437 139 aa12.56□□□□□ -0.4
CHRFAM7A-203ENST00000401522 ASPHD1Q5U4P2 390 aa12.56□□□□□ -0.4
CHRFAM7A-203ENST00000401522 PRSS22Q9GZN4 317 aa12.56□□□□□ -0.4
CHRFAM7A-203ENST00000401522 OTORQ9NRC9 128 aa12.56□□□□□ -0.4
CHRFAM7A-203ENST00000401522 A8MWL6 223 aa12.56□□□□□ -0.4
CHRFAM7A-203ENST00000401522 TOX4O94842 621 aa12.56□□□□□ -0.4
CHRFAM7A-203ENST00000401522 C3orf79P0CE67 100 aa12.56□□□□□ -0.4
CHRFAM7A-203ENST00000401522 IGLC1P0CG04 106 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms