RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 PITX3O75364 302 aa8.33□□□□□ -1.08
LINC00544-201ENST00000400540 ORM2P19652 201 aa8.33□□□□□ -1.08
LINC00544-201ENST00000400540 SPCS2Q15005 226 aa8.33□□□□□ -1.08
LINC00544-201ENST00000400540 SAMD13Q5VXD3 122 aa8.33□□□□□ -1.08
LINC00544-201ENST00000400540 RNF141Q8WVD5 230 aa8.33□□□□□ -1.08
LINC00544-201ENST00000400540 MCUBQ9NWR8 336 aa8.33□□□□□ -1.08
LINC00544-201ENST00000400540 DUSP14O95147 198 aaKnown RBP8.32□□□□□ -1.08
LINC00544-201ENST00000400540 TSPOP30536 169 aa8.32□□□□□ -1.08
LINC00544-201ENST00000400540 ATP5IP56385 69 aaPredicted RBP8.32□□□□□ -1.08
LINC00544-201ENST00000400540 RAB11AP62491 216 aa8.32□□□□□ -1.08
LINC00544-201ENST00000400540 FGL1Q08830 312 aa8.32□□□□□ -1.08
LINC00544-201ENST00000400540 SPATA12Q7Z6I5 190 aa8.32□□□□□ -1.08
LINC00544-201ENST00000400540 OR1B1Q8NGR6 318 aa8.32□□□□□ -1.08
LINC00544-201ENST00000400540 KRTAP1-5Q9BYS1 174 aa8.32□□□□□ -1.08
LINC00544-201ENST00000400540 SCP2D1Q9UJQ7 156 aa8.32□□□□□ -1.08
LINC00544-201ENST00000400540 BOLA2-SMG1P6H3BVE0 249 aa8.31□□□□□ -1.08
LINC00544-201ENST00000400540 ATP5G1P05496 136 aa8.31□□□□□ -1.08
LINC00544-201ENST00000400540 ANXA3P12429 323 aa8.31□□□□□ -1.08
LINC00544-201ENST00000400540 ATP5G3P48201 142 aa8.31□□□□□ -1.08
LINC00544-201ENST00000400540 GGNBP1Q5YKI7 109 aa8.31□□□□□ -1.08
LINC00544-201ENST00000400540 Q8N1X5 172 aa8.31□□□□□ -1.08
LINC00544-201ENST00000400540 ZNF738Q8NE65 137 aa8.31□□□□□ -1.08
LINC00544-201ENST00000400540 DIRAS2Q96HU8 199 aa8.31□□□□□ -1.08
LINC00544-201ENST00000400540 SLC45A2Q9UMX9 530 aa8.31□□□□□ -1.08
LINC00544-201ENST00000400540 VPS13BQ7Z7G8 4022 aa8.31□□□□□ -1.08
LINC00544-201ENST00000400540 H3BP45 60 aa8.3□□□□□ -1.08
LINC00544-201ENST00000400540 H3BRN7 92 aa8.3□□□□□ -1.08
LINC00544-201ENST00000400540 CFDP00746 253 aaPredicted RBP8.3□□□□□ -1.08
LINC00544-201ENST00000400540 HTN1P15515 57 aa8.3□□□□□ -1.08
LINC00544-201ENST00000400540 CCL18P55774 89 aa8.3□□□□□ -1.08
LINC00544-201ENST00000400540 SRPXP78539 464 aa8.3□□□□□ -1.08
LINC00544-201ENST00000400540 HIST1H1AQ02539 215 aaPredicted RBP8.3□□□□□ -1.08
LINC00544-201ENST00000400540 SSX7Q7RTT5 188 aa8.3□□□□□ -1.08
LINC00544-201ENST00000400540 GPR141Q7Z602 305 aa8.3□□□□□ -1.08
LINC00544-201ENST00000400540 TMED4Q7Z7H5 227 aa8.3□□□□□ -1.08
LINC00544-201ENST00000400540 BPIFCQ8NFQ6 507 aa8.3□□□□□ -1.08
LINC00544-201ENST00000400540 OR4D5Q8NGN0 318 aa8.3□□□□□ -1.08
LINC00544-201ENST00000400540 SCGB3A2Q96PL1 93 aa8.3□□□□□ -1.08
LINC00544-201ENST00000400540 UHRF2Q96PU4 802 aa8.3□□□□□ -1.08
LINC00544-201ENST00000400540 LINC01587Q99440 93 aa8.3□□□□□ -1.08
LINC00544-201ENST00000400540 TMEM147Q9BVK8 224 aa8.3□□□□□ -1.08
LINC00544-201ENST00000400540 SCRT2Q9NQ03 307 aa8.3□□□□□ -1.08
LINC00544-201ENST00000400540 CBY3A6NI87 242 aa8.29□□□□□ -1.08
LINC00544-201ENST00000400540 WRBO00258 174 aa8.29□□□□□ -1.08
LINC00544-201ENST00000400540 KRTAP10-2P60368 255 aa8.29□□□□□ -1.08
LINC00544-201ENST00000400540 RHOBP62745 196 aa8.29□□□□□ -1.08
LINC00544-201ENST00000400540 AKR1C1Q04828 323 aa8.29□□□□□ -1.08
LINC00544-201ENST00000400540 ACOT7LQ6ZUV0 252 aa8.29□□□□□ -1.08
LINC00544-201ENST00000400540 DUXBA0A1W2PPF3 345 aa8.28□□□□□ -1.08
LINC00544-201ENST00000400540 SYNGR2O43760 224 aa8.28□□□□□ -1.08
LINC00544-201ENST00000400540 B2MP61769 119 aa8.28□□□□□ -1.08
LINC00544-201ENST00000400540 CLINT1Q14677 625 aa8.28□□□□□ -1.08
LINC00544-201ENST00000400540 KIR3DS1Q14943 382 aa8.28□□□□□ -1.08
LINC00544-201ENST00000400540 SPANXN5Q5MJ07 72 aa8.28□□□□□ -1.08
LINC00544-201ENST00000400540 OR8A1Q8NGG7 326 aa8.28□□□□□ -1.08
LINC00544-201ENST00000400540 C16orf74Q96GX8 76 aa8.28□□□□□ -1.08
LINC00544-201ENST00000400540 GPR82Q96P67 336 aa8.28□□□□□ -1.08
LINC00544-201ENST00000400540 Q9H8V8 135 aa8.28□□□□□ -1.08
LINC00544-201ENST00000400540 NOP10Q9NPE3 64 aaKnown RBP8.28□□□□□ -1.08
LINC00544-201ENST00000400540 TRAV26-1A0A087WT03 109 aa8.27□□□□□ -1.09
LINC00544-201ENST00000400540 A0A0J9YY99 117 aa8.27□□□□□ -1.09
LINC00544-201ENST00000400540 MED6O75586 246 aa8.27□□□□□ -1.09
LINC00544-201ENST00000400540 CXCL3P19876 107 aa8.27□□□□□ -1.09
LINC00544-201ENST00000400540 VAMP1P23763 118 aa8.27□□□□□ -1.09
LINC00544-201ENST00000400540 TAS2R60P59551 318 aa8.27□□□□□ -1.09
LINC00544-201ENST00000400540 CYP2G1PQ6ZSU1 146 aa8.27□□□□□ -1.09
LINC00544-201ENST00000400540 TMEM256Q8N2U0 113 aa8.27□□□□□ -1.09
LINC00544-201ENST00000400540 LRTM2Q8N967 370 aa8.27□□□□□ -1.09
LINC00544-201ENST00000400540 DYNC2LI1Q8TCX1 351 aa8.27□□□□□ -1.09
LINC00544-201ENST00000400540 RNASE8Q8TDE3 154 aaKnown RBP8.27□□□□□ -1.09
LINC00544-201ENST00000400540 SHANK2-AS3Q9BTD1 123 aa8.27□□□□□ -1.09
LINC00544-201ENST00000400540 PARD6GQ9BYG4 376 aaPredicted RBP8.27□□□□□ -1.09
LINC00544-201ENST00000400540 TIMM8BQ9Y5J9 83 aaPredicted RBP8.27□□□□□ -1.09
LINC00544-201ENST00000400540 MYCBP2O75592 4640 aa8.27□□□□□ -1.09
LINC00544-201ENST00000400540 SMCO3A2RU48 225 aa8.26□□□□□ -1.09
LINC00544-201ENST00000400540 CCNKO75909 580 aa8.26□□□□□ -1.09
LINC00544-201ENST00000400540 IL5P05113 134 aa8.26□□□□□ -1.09
LINC00544-201ENST00000400540 HOXB5P09067 269 aa8.26□□□□□ -1.09
LINC00544-201ENST00000400540 SNRPCP09234 159 aaKnown RBP8.26□□□□□ -1.09
LINC00544-201ENST00000400540 LINC00869P0C866 280 aa8.26□□□□□ -1.09
LINC00544-201ENST00000400540 SLC25A6P12236 298 aa8.26□□□□□ -1.09
LINC00544-201ENST00000400540 RPL7P18124 248 aaKnown RBP8.26□□□□□ -1.09
LINC00544-201ENST00000400540 HOXA5P20719 270 aa8.26□□□□□ -1.09
LINC00544-201ENST00000400540 RPP30P78346 268 aaKnown RBP8.26□□□□□ -1.09
LINC00544-201ENST00000400540 DLK1P80370 383 aa8.26□□□□□ -1.09
LINC00544-201ENST00000400540 PPP1R1AQ13522 171 aa8.26□□□□□ -1.09
LINC00544-201ENST00000400540 OR5I1Q13606 314 aa8.26□□□□□ -1.09
LINC00544-201ENST00000400540 PSG3Q16557 428 aa8.26□□□□□ -1.09
LINC00544-201ENST00000400540 TMEM128Q5BJH2 165 aa8.26□□□□□ -1.09
LINC00544-201ENST00000400540 TMEM144Q7Z5S9 345 aa8.26□□□□□ -1.09
LINC00544-201ENST00000400540 CIB3Q96Q77 187 aaPredicted RBP8.26□□□□□ -1.09
LINC00544-201ENST00000400540 KRTAP3-3Q9BYR6 98 aa8.26□□□□□ -1.09
LINC00544-201ENST00000400540 KRTAP3-2Q9BYR7 98 aa8.26□□□□□ -1.09
LINC00544-201ENST00000400540 Q9H3A6 140 aa8.26□□□□□ -1.09
LINC00544-201ENST00000400540 PPP1R14DQ9NXH3 145 aa8.26□□□□□ -1.09
LINC00544-201ENST00000400540 CCDC59Q9P031 241 aaKnown RBP8.26□□□□□ -1.09
LINC00544-201ENST00000400540 RABL2AQ9UBK7 228 aaPredicted RBP8.26□□□□□ -1.09
LINC00544-201ENST00000400540 RSL24D1Q9UHA3 163 aaKnown RBP8.26□□□□□ -1.09
LINC00544-201ENST00000400540 RABL2BQ9UNT1 228 aa8.26□□□□□ -1.09
LINC00544-201ENST00000400540 HIGD1AQ9Y241 93 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms