RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 LYZP61626 148 aa11.15□□□□□ -0.62
APOB-202ENST00000399256 SEM1Q6ZVN7 128 aa11.15□□□□□ -0.62
APOB-202ENST00000399256 OR4A5Q8NH83 315 aa11.15□□□□□ -0.62
APOB-202ENST00000399256 PLCE1Q9P212 2302 aa11.15□□□□□ -0.62
APOB-202ENST00000399256 A0A1B0GUT8 65 aa11.15□□□□□ -0.62
APOB-202ENST00000399256 OVOL3O00110 214 aa11.15□□□□□ -0.62
APOB-202ENST00000399256 FAM169BQ8N8A8 192 aa11.15□□□□□ -0.62
APOB-202ENST00000399256 TRGV9Q99603 122 aa11.15□□□□□ -0.62
APOB-202ENST00000399256 HILPDAQ9Y5L2 63 aa11.15□□□□□ -0.62
APOB-202ENST00000399256 PTPRZ1P23471 2315 aaPredicted RBP11.15□□□□□ -0.63
APOB-202ENST00000399256 LOC389332A0A1B0GUA5 103 aa11.15□□□□□ -0.63
APOB-202ENST00000399256 LOXL1Q08397 574 aaPredicted RBP11.15□□□□□ -0.63
APOB-202ENST00000399256 ZNF474Q6S9Z5 364 aaPredicted RBP11.15□□□□□ -0.63
APOB-202ENST00000399256 JMJD8Q96S16 334 aa11.15□□□□□ -0.63
APOB-202ENST00000399256 IGLV2-11P01706 119 aa11.14□□□□□ -0.63
APOB-202ENST00000399256 TMEM200BQ69YZ2 307 aa11.14□□□□□ -0.63
APOB-202ENST00000399256 OR10AG1Q8NH19 301 aa11.14□□□□□ -0.63
APOB-202ENST00000399256 AP1S3Q96PC3 154 aa11.14□□□□□ -0.63
APOB-202ENST00000399256 RABAC1Q9UI14 185 aa11.14□□□□□ -0.63
APOB-202ENST00000399256 FCN3O75636 299 aa11.14□□□□□ -0.63
APOB-202ENST00000399256 FXYD7P58549 80 aa11.14□□□□□ -0.63
APOB-202ENST00000399256 VMA21Q3ZAQ7 101 aa11.14□□□□□ -0.63
APOB-202ENST00000399256 C8orf46Q8TAG6 207 aa11.14□□□□□ -0.63
APOB-202ENST00000399256 ZNF785A8K8V0 405 aa11.13□□□□□ -0.63
APOB-202ENST00000399256 CRYGCP07315 174 aa11.13□□□□□ -0.63
APOB-202ENST00000399256 IFI27P40305 119 aaPredicted RBP11.13□□□□□ -0.63
APOB-202ENST00000399256 CSN1S1P47710 185 aa11.13□□□□□ -0.63
APOB-202ENST00000399256 SEC11AP67812 179 aa11.13□□□□□ -0.63
APOB-202ENST00000399256 RPRMLQ8N4K4 120 aa11.13□□□□□ -0.63
APOB-202ENST00000399256 OTORQ9NRC9 128 aa11.13□□□□□ -0.63
APOB-202ENST00000399256 HIGD1AQ9Y241 93 aa11.13□□□□□ -0.63
APOB-202ENST00000399256 H3BUT2 72 aa11.13□□□□□ -0.63
APOB-202ENST00000399256 FGF6P10767 208 aa11.13□□□□□ -0.63
APOB-202ENST00000399256 MRGPRG-AS1Q2M3A8 158 aa11.13□□□□□ -0.63
APOB-202ENST00000399256 TIMM23BQ5SRD1 257 aa11.13□□□□□ -0.63
APOB-202ENST00000399256 FER1L6-AS1Q8NA97 138 aa11.13□□□□□ -0.63
APOB-202ENST00000399256 RIGQ13278 110 aa11.13□□□□□ -0.63
APOB-202ENST00000399256 ZADH2Q8N4Q0 377 aa11.13□□□□□ -0.63
APOB-202ENST00000399256 TNFRSF1AP19438 455 aa11.12□□□□□ -0.63
APOB-202ENST00000399256 TEX36Q5VZQ5 186 aa11.12□□□□□ -0.63
APOB-202ENST00000399256 C22orf34Q6ZV56 151 aa11.12□□□□□ -0.63
APOB-202ENST00000399256 PIP4P2Q8N4L2 257 aa11.12□□□□□ -0.63
APOB-202ENST00000399256 SERTM2A0A1B0GWG4 89 aa11.12□□□□□ -0.63
APOB-202ENST00000399256 CNTFRP26992 372 aa11.12□□□□□ -0.63
APOB-202ENST00000399256 UFSP1Q6NVU6 142 aa11.12□□□□□ -0.63
APOB-202ENST00000399256 RAB37Q96AX2 223 aa11.12□□□□□ -0.63
APOB-202ENST00000399256 ABCA1O95477 2261 aa11.12□□□□□ -0.63
APOB-202ENST00000399256 C16orf54Q6UWD8 224 aa11.11□□□□□ -0.63
APOB-202ENST00000399256 C17orf77Q96MU5 243 aa11.11□□□□□ -0.63
APOB-202ENST00000399256 A0A096LNJ9 63 aa11.11□□□□□ -0.63
APOB-202ENST00000399256 C9orf118A6NHY6 69 aa11.11□□□□□ -0.63
APOB-202ENST00000399256 GTF2H5Q6ZYL4 71 aa11.11□□□□□ -0.63
APOB-202ENST00000399256 SLC25A39Q9BZJ4 359 aaPredicted RBP11.11□□□□□ -0.63
APOB-202ENST00000399256 THYN1Q9P016 225 aa11.11□□□□□ -0.63
APOB-202ENST00000399256 RPL27AP46776 148 aaKnown RBP11.11□□□□□ -0.63
APOB-202ENST00000399256 TMEM186Q96B77 213 aa11.11□□□□□ -0.63
APOB-202ENST00000399256 CACNG7P62955 275 aa11.1□□□□□ -0.63
APOB-202ENST00000399256 PRB3Q04118 309 aaPredicted RBP11.1□□□□□ -0.63
APOB-202ENST00000399256 MEF2CQ06413 473 aaPredicted RBP11.1□□□□□ -0.63
APOB-202ENST00000399256 KIR3DS1Q14943 382 aa11.1□□□□□ -0.63
APOB-202ENST00000399256 CFAP47Q6ZTR5 3102 aa11.1□□□□□ -0.63
APOB-202ENST00000399256 TMSB15BA0A087X1C1 80 aa11.1□□□□□ -0.63
APOB-202ENST00000399256 TRAV17A0A0B4J275 112 aa11.1□□□□□ -0.63
APOB-202ENST00000399256 A6NDN8 102 aa11.1□□□□□ -0.63
APOB-202ENST00000399256 D6R8Y8 96 aa11.1□□□□□ -0.63
APOB-202ENST00000399256 H3BRM9 83 aa11.1□□□□□ -0.63
APOB-202ENST00000399256 WFDC8Q8IUA0 241 aa11.1□□□□□ -0.63
APOB-202ENST00000399256 BOD1L1Q8NFC6 3051 aa11.1□□□□□ -0.63
APOB-202ENST00000399256 LYPD2Q6UXB3 125 aa11.09□□□□□ -0.63
APOB-202ENST00000399256 SIGLEC8Q9NYZ4 499 aa11.09□□□□□ -0.63
APOB-202ENST00000399256 DCHS1Q96JQ0 3298 aa11.09□□□□□ -0.63
APOB-202ENST00000399256 RBP4P02753 201 aa11.09□□□□□ -0.63
APOB-202ENST00000399256 DLX1P56177 255 aa11.09□□□□□ -0.63
APOB-202ENST00000399256 PRSS57Q6UWY2 283 aa11.09□□□□□ -0.63
APOB-202ENST00000399256 A0A0G2JLM5 398 aa11.09□□□□□ -0.63
APOB-202ENST00000399256 MBD3L4A6NDZ8 208 aaPredicted RBP11.09□□□□□ -0.63
APOB-202ENST00000399256 MBD3L3A6NE82 208 aaPredicted RBP11.09□□□□□ -0.63
APOB-202ENST00000399256 MBD3L5A6NJ08 208 aaPredicted RBP11.09□□□□□ -0.63
APOB-202ENST00000399256 TMEM238C9JI98 176 aa11.09□□□□□ -0.63
APOB-202ENST00000399256 K7EP34 96 aa11.09□□□□□ -0.63
APOB-202ENST00000399256 CRIP1P50238 77 aa11.09□□□□□ -0.63
APOB-202ENST00000399256 PLP1P60201 277 aa11.09□□□□□ -0.63
APOB-202ENST00000399256 MBD3L2Q8NHZ7 208 aaPredicted RBP11.09□□□□□ -0.63
APOB-202ENST00000399256 TMEM213A2RRL7 107 aa11.08□□□□□ -0.64
APOB-202ENST00000399256 HOXB4P17483 251 aaPredicted RBP11.08□□□□□ -0.64
APOB-202ENST00000399256 FAM27E3Q08E93 113 aa11.08□□□□□ -0.64
APOB-202ENST00000399256 PSG8Q9UQ74 426 aa11.08□□□□□ -0.64
APOB-202ENST00000399256 A1L4Q6 167 aa11.08□□□□□ -0.64
APOB-202ENST00000399256 SMAD7O15105 426 aaKnown RBP11.08□□□□□ -0.64
APOB-202ENST00000399256 APOBEC3AP31941 199 aaPredicted RBP11.08□□□□□ -0.64
APOB-202ENST00000399256 BOD1L2Q8IYS8 172 aa11.08□□□□□ -0.64
APOB-202ENST00000399256 AKAP13Q12802 2813 aa11.07□□□□□ -0.64
APOB-202ENST00000399256 NMUP48645 174 aa11.07□□□□□ -0.64
APOB-202ENST00000399256 TM4SF20Q53R12 229 aa11.07□□□□□ -0.64
APOB-202ENST00000399256 WFDC3Q8IUB2 231 aa11.07□□□□□ -0.64
APOB-202ENST00000399256 AMN1Q8IY45 258 aa11.07□□□□□ -0.64
APOB-202ENST00000399256 C8orf49Q96NF6 230 aa11.07□□□□□ -0.64
APOB-202ENST00000399256 F11RQ9Y624 299 aaKnown RBP11.07□□□□□ -0.64
APOB-202ENST00000399256 ROS1P08922 2347 aa11.07□□□□□ -0.64
APOB-202ENST00000399256 PAX2Q02962 417 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms