RNA–Protein interactions for RNA: ENST00000399127.5

COL25A1-202, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-202ENST00000399127 GNG4P50150 75 aa9.33□□□□□ -0.92
COL25A1-202ENST00000399127 EFNA4P52798 201 aa9.33□□□□□ -0.92
COL25A1-202ENST00000399127 KCNIP4Q6PIL6 250 aa9.33□□□□□ -0.92
COL25A1-202ENST00000399127 NHLRC2Q8NBF2 726 aa9.33□□□□□ -0.92
COL25A1-202ENST00000399127 TMEM116Q8NCL8 245 aa9.33□□□□□ -0.92
COL25A1-202ENST00000399127 BLNKQ8WV28 456 aa9.33□□□□□ -0.92
COL25A1-202ENST00000399127 SAP30O75446 220 aa9.33□□□□□ -0.92
COL25A1-202ENST00000399127 HOXB4P17483 251 aaPredicted RBP9.33□□□□□ -0.92
COL25A1-202ENST00000399127 SRP14P37108 136 aaKnown RBP9.33□□□□□ -0.92
COL25A1-202ENST00000399127 TPPP2P59282 170 aa9.33□□□□□ -0.92
COL25A1-202ENST00000399127 FXYD3Q14802 87 aa9.33□□□□□ -0.92
COL25A1-202ENST00000399127 SAMD13Q5VXD3 122 aa9.33□□□□□ -0.92
COL25A1-202ENST00000399127 PVRIGQ6DKI7 326 aa9.33□□□□□ -0.92
COL25A1-202ENST00000399127 ZNF462Q96JM2 2506 aa9.32□□□□□ -0.92
COL25A1-202ENST00000399127 CD99P14209 185 aa9.32□□□□□ -0.92
COL25A1-202ENST00000399127 NIT1Q86X76 327 aa9.32□□□□□ -0.92
COL25A1-202ENST00000399127 OR10G8Q8NGN5 311 aa9.32□□□□□ -0.92
COL25A1-202ENST00000399127 RNF5Q99942 180 aa9.32□□□□□ -0.92
COL25A1-202ENST00000399127 SMPXQ9UHP9 88 aa9.32□□□□□ -0.92
COL25A1-202ENST00000399127 A0A1W2PRE2 83 aa9.32□□□□□ -0.92
COL25A1-202ENST00000399127 C9JCJ5 164 aa9.31□□□□□ -0.92
COL25A1-202ENST00000399127 I3L2K1 104 aa9.31□□□□□ -0.92
COL25A1-202ENST00000399127 TYMSP04818 313 aa9.31□□□□□ -0.92
COL25A1-202ENST00000399127 LYZP61626 148 aa9.31□□□□□ -0.92
COL25A1-202ENST00000399127 PAFAH1B2P68402 229 aa9.31□□□□□ -0.92
COL25A1-202ENST00000399127 TIGITQ495A1 244 aa9.31□□□□□ -0.92
COL25A1-202ENST00000399127 C1orf122Q6ZSJ8 110 aa9.31□□□□□ -0.92
COL25A1-202ENST00000399127 FXYD5Q96DB9 178 aa9.31□□□□□ -0.92
COL25A1-202ENST00000399127 ZNF48Q96MX3 618 aaPredicted RBP9.31□□□□□ -0.92
COL25A1-202ENST00000399127 TRGV9Q99603 122 aa9.31□□□□□ -0.92
COL25A1-202ENST00000399127 RNASE7Q9H1E1 156 aaKnown RBP9.31□□□□□ -0.92
COL25A1-202ENST00000399127 ARL2-SNX15V9GYD0 113 aa9.31□□□□□ -0.92
COL25A1-202ENST00000399127 LRRK2Q5S007 2527 aa9.31□□□□□ -0.92
COL25A1-202ENST00000399127 A0A1B0GV72 72 aa9.31□□□□□ -0.92
COL25A1-202ENST00000399127 GNG7O60262 68 aa9.31□□□□□ -0.92
COL25A1-202ENST00000399127 MGST1P10620 155 aaKnown RBP9.31□□□□□ -0.92
COL25A1-202ENST00000399127 TSPOP30536 169 aa9.31□□□□□ -0.92
COL25A1-202ENST00000399127 SRSF1Q07955 248 aaKnown RBP eCLIP9.31□□□□□ -0.92
COL25A1-202ENST00000399127 C5orf64Q2M2E5 130 aa9.31□□□□□ -0.92
COL25A1-202ENST00000399127 BTF3L4Q96K17 158 aa9.31□□□□□ -0.92
COL25A1-202ENST00000399127 SGK494Q96LW2 274 aa9.31□□□□□ -0.92
COL25A1-202ENST00000399127 ABCA2Q9BZC7 2435 aa9.3□□□□□ -0.92
COL25A1-202ENST00000399127 GAGE12BA1L429 117 aa9.3□□□□□ -0.92
COL25A1-202ENST00000399127 TOX4O94842 621 aa9.3□□□□□ -0.92
COL25A1-202ENST00000399127 IGLC1P0CG04 106 aa9.3□□□□□ -0.92
COL25A1-202ENST00000399127 GNG5P63218 68 aa9.3□□□□□ -0.92
COL25A1-202ENST00000399127 NDPQ00604 133 aa9.3□□□□□ -0.92
COL25A1-202ENST00000399127 STXBP6Q8NFX7 210 aa9.3□□□□□ -0.92
COL25A1-202ENST00000399127 NPBQ8NG41 125 aa9.3□□□□□ -0.92
COL25A1-202ENST00000399127 PERPQ96FX8 193 aa9.3□□□□□ -0.92
COL25A1-202ENST00000399127 CCL19Q99731 98 aa9.3□□□□□ -0.92
COL25A1-202ENST00000399127 SIRPDQ9H106 197 aa9.3□□□□□ -0.92
COL25A1-202ENST00000399127 MRPL27Q9P0M9 148 aaKnown RBP9.3□□□□□ -0.92
COL25A1-202ENST00000399127 MRPS16Q9Y3D3 137 aaKnown RBP9.3□□□□□ -0.92
COL25A1-202ENST00000399127 FAM208BQ5VWN6 2430 aa9.3□□□□□ -0.92
COL25A1-202ENST00000399127 NDUFA3O95167 84 aa9.3□□□□□ -0.92
COL25A1-202ENST00000399127 LMO4P61968 165 aa9.3□□□□□ -0.92
COL25A1-202ENST00000399127 PAX2Q02962 417 aa9.3□□□□□ -0.92
COL25A1-202ENST00000399127 GRIFINA4D1Z8 144 aa9.29□□□□□ -0.92
COL25A1-202ENST00000399127 K7EIM0 57 aa9.29□□□□□ -0.92
COL25A1-202ENST00000399127 IGHV4-39P01824 125 aa9.29□□□□□ -0.92
COL25A1-202ENST00000399127 RPL15P61313 204 aaKnown RBP9.29□□□□□ -0.92
COL25A1-202ENST00000399127 CX3CL1P78423 397 aa9.29□□□□□ -0.92
COL25A1-202ENST00000399127 FOXL1Q12952 345 aa9.29□□□□□ -0.92
COL25A1-202ENST00000399127 FAM120AOSQ5T036 256 aa9.29□□□□□ -0.92
COL25A1-202ENST00000399127 ZNF329Q86UD4 541 aa9.29□□□□□ -0.92
COL25A1-202ENST00000399127 RASL11BQ9BPW5 248 aa9.29□□□□□ -0.92
COL25A1-202ENST00000399127 RNF114Q9Y508 228 aa9.29□□□□□ -0.92
COL25A1-202ENST00000399127 TRAPPC1Q9Y5R8 145 aa9.29□□□□□ -0.92
COL25A1-202ENST00000399127 POLQO75417 2590 aa9.29□□□□□ -0.92
COL25A1-202ENST00000399127 SPINK4O60575 86 aa9.29□□□□□ -0.92
COL25A1-202ENST00000399127 IGKV1-17P01599 117 aa9.29□□□□□ -0.92
COL25A1-202ENST00000399127 FRMD6-AS1P0C7T7 363 aa9.29□□□□□ -0.92
COL25A1-202ENST00000399127 PRB4P10163 310 aaPredicted RBP9.29□□□□□ -0.92
COL25A1-202ENST00000399127 CCDC144NLQ6NUI1 221 aa9.29□□□□□ -0.92
COL25A1-202ENST00000399127 TCF24Q7RTU0 167 aa9.29□□□□□ -0.92
COL25A1-202ENST00000399127 Q8N976 141 aa9.29□□□□□ -0.92
COL25A1-202ENST00000399127 ZNF586Q9NXT0 402 aa9.29□□□□□ -0.92
COL25A1-202ENST00000399127 DIRC3C9JPN6 131 aa9.28□□□□□ -0.92
COL25A1-202ENST00000399127 IGLV2-8P01709 118 aa9.28□□□□□ -0.92
COL25A1-202ENST00000399127 COX6B1P14854 86 aa9.28□□□□□ -0.92
COL25A1-202ENST00000399127 LINC00310P59036 64 aa9.28□□□□□ -0.92
COL25A1-202ENST00000399127 SLC35B1P78383 322 aa9.28□□□□□ -0.92
COL25A1-202ENST00000399127 KIR3DL3Q8N743 410 aa9.28□□□□□ -0.92
COL25A1-202ENST00000399127 NRGNQ92686 78 aa9.28□□□□□ -0.92
COL25A1-202ENST00000399127 IGF2BP2-AS1Q96M15 143 aa9.28□□□□□ -0.92
COL25A1-202ENST00000399127 FBXL7Q9UJT9 491 aa9.28□□□□□ -0.92
COL25A1-202ENST00000399127 TP53TG3Q9ULZ0 132 aa9.28□□□□□ -0.92
COL25A1-202ENST00000399127 IGHV3OR16-10A0A075B7F0 116 aa9.28□□□□□ -0.92
COL25A1-202ENST00000399127 OVOL3O00110 214 aa9.28□□□□□ -0.92
COL25A1-202ENST00000399127 ISLRO14498 428 aa9.28□□□□□ -0.92
COL25A1-202ENST00000399127 TCL1AP56279 114 aa9.28□□□□□ -0.92
COL25A1-202ENST00000399127 KRTDAPP60985 99 aa9.28□□□□□ -0.92
COL25A1-202ENST00000399127 ARPC1AQ92747 370 aa9.28□□□□□ -0.92
COL25A1-202ENST00000399127 CDC42EP3Q9UKI2 254 aa9.28□□□□□ -0.92
COL25A1-202ENST00000399127 HIGD1AQ9Y241 93 aa9.28□□□□□ -0.92
COL25A1-202ENST00000399127 V9GYV3 84 aa9.28□□□□□ -0.92
COL25A1-202ENST00000399127 PEX7O00628 323 aa9.27□□□□□ -0.93
COL25A1-202ENST00000399127 CA1P00915 261 aaPredicted RBP9.27□□□□□ -0.93
COL25A1-202ENST00000399127 IGHV3-23P01764 117 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms