RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 TMEM183BQ1AE95 376 aa11.99□□□□□ -0.49
COL25A1-201ENST00000399126 TSSC4Q9Y5U2 329 aaPredicted RBP11.99□□□□□ -0.49
COL25A1-201ENST00000399126 MSMBP08118 114 aa11.98□□□□□ -0.49
COL25A1-201ENST00000399126 SLC25A33Q9BSK2 321 aa11.98□□□□□ -0.49
COL25A1-201ENST00000399126 SRD5A3Q9H8P0 318 aa11.98□□□□□ -0.49
COL25A1-201ENST00000399126 ITPR3Q14573 2671 aa11.98□□□□□ -0.49
COL25A1-201ENST00000399126 A0A1W2PRX2 142 aa11.98□□□□□ -0.49
COL25A1-201ENST00000399126 PLA2G2AP14555 144 aa11.98□□□□□ -0.49
COL25A1-201ENST00000399126 ZNF90Q03938 601 aa11.98□□□□□ -0.49
COL25A1-201ENST00000399126 EBI3Q14213 229 aa11.98□□□□□ -0.49
COL25A1-201ENST00000399126 KLF17Q5JT82 389 aaPredicted RBP11.98□□□□□ -0.49
COL25A1-201ENST00000399126 ZNF114Q8NC26 417 aa11.98□□□□□ -0.49
COL25A1-201ENST00000399126 TMEM242Q9NWH2 141 aa11.98□□□□□ -0.49
COL25A1-201ENST00000399126 IGKV1D-37A0A075B6S9 117 aa11.97□□□□□ -0.49
COL25A1-201ENST00000399126 CLDN34H7C241 214 aa11.97□□□□□ -0.49
COL25A1-201ENST00000399126 AVPP01185 164 aa11.97□□□□□ -0.49
COL25A1-201ENST00000399126 CX3CL1P78423 397 aa11.97□□□□□ -0.49
COL25A1-201ENST00000399126 RAB31Q13636 194 aa11.97□□□□□ -0.49
COL25A1-201ENST00000399126 NIPSNAP3BQ9BS92 247 aa11.97□□□□□ -0.49
COL25A1-201ENST00000399126 F11RQ9Y624 299 aaKnown RBP11.97□□□□□ -0.49
COL25A1-201ENST00000399126 SH2D7A6NKC9 451 aaPredicted RBP11.97□□□□□ -0.49
COL25A1-201ENST00000399126 TEX43Q6ZNM6 134 aa11.97□□□□□ -0.49
COL25A1-201ENST00000399126 C7orf69Q9H7B7 122 aa11.97□□□□□ -0.49
COL25A1-201ENST00000399126 CR1P17927 2039 aa11.97□□□□□ -0.49
COL25A1-201ENST00000399126 A0A096LNT2 108 aa11.96□□□□□ -0.49
COL25A1-201ENST00000399126 IGHV1-69DA0A0B4J2H0 117 aa11.96□□□□□ -0.49
COL25A1-201ENST00000399126 IGHV1-69P01742 117 aa11.96□□□□□ -0.49
COL25A1-201ENST00000399126 SUMO1P63165 101 aaKnown RBP11.96□□□□□ -0.49
COL25A1-201ENST00000399126 PVRIGQ6DKI7 326 aa11.96□□□□□ -0.49
COL25A1-201ENST00000399126 WNT10AQ9GZT5 417 aa11.96□□□□□ -0.49
COL25A1-201ENST00000399126 ARL14EPLP0DKL9 152 aa11.96□□□□□ -0.5
COL25A1-201ENST00000399126 ASPHD1Q5U4P2 390 aa11.96□□□□□ -0.5
COL25A1-201ENST00000399126 PRR27Q6MZM9 219 aa11.96□□□□□ -0.5
COL25A1-201ENST00000399126 Q8N9W7 124 aa11.96□□□□□ -0.5
COL25A1-201ENST00000399126 PRRC2AP48634 2157 aaKnown RBP11.96□□□□□ -0.5
COL25A1-201ENST00000399126 MT-CO2P00403 227 aa11.95□□□□□ -0.5
COL25A1-201ENST00000399126 HSPB1P04792 205 aaKnown RBP11.95□□□□□ -0.5
COL25A1-201ENST00000399126 MIR17HGQ75NE6 70 aa11.95□□□□□ -0.5
COL25A1-201ENST00000399126 TMEM219Q86XT9 240 aa11.95□□□□□ -0.5
COL25A1-201ENST00000399126 HSPB9Q9BQS6 159 aa11.95□□□□□ -0.5
COL25A1-201ENST00000399126 FAM106CPP0CH98 169 aa11.95□□□□□ -0.5
COL25A1-201ENST00000399126 FAM78BQ5VT40 261 aa11.95□□□□□ -0.5
COL25A1-201ENST00000399126 TOMM20LQ6UXN7 152 aa11.94□□□□□ -0.5
COL25A1-201ENST00000399126 TMEM37Q8WXS4 190 aa11.94□□□□□ -0.5
COL25A1-201ENST00000399126 ARPC1AQ92747 370 aa11.94□□□□□ -0.5
COL25A1-201ENST00000399126 VAMP8Q9BV40 100 aa11.94□□□□□ -0.5
COL25A1-201ENST00000399126 KCNIP2Q9NS61 270 aa11.94□□□□□ -0.5
COL25A1-201ENST00000399126 S4R3C0 116 aa11.94□□□□□ -0.5
COL25A1-201ENST00000399126 UNC79Q9P2D8 2635 aa11.94□□□□□ -0.5
COL25A1-201ENST00000399126 PAGE4O60829 102 aa11.94□□□□□ -0.5
COL25A1-201ENST00000399126 RIPPLY3P57055 190 aa11.94□□□□□ -0.5
COL25A1-201ENST00000399126 DSCR9P59020 149 aa11.94□□□□□ -0.5
COL25A1-201ENST00000399126 MORN5Q5VZ52 161 aa11.94□□□□□ -0.5
COL25A1-201ENST00000399126 ZNF562Q6V9R5 426 aa11.94□□□□□ -0.5
COL25A1-201ENST00000399126 CYP2G1PQ6ZSU1 146 aa11.94□□□□□ -0.5
COL25A1-201ENST00000399126 PDZD2O15018 2839 aa11.94□□□□□ -0.5
COL25A1-201ENST00000399126 IGHV7-81A0A0B4J1V7 117 aa11.94□□□□□ -0.5
COL25A1-201ENST00000399126 B4DSR2 109 aa11.94□□□□□ -0.5
COL25A1-201ENST00000399126 RNF223E7ERA6 249 aa11.94□□□□□ -0.5
COL25A1-201ENST00000399126 SLC25A16P16260 332 aa11.94□□□□□ -0.5
COL25A1-201ENST00000399126 CST9LP1Q5W188 147 aa11.94□□□□□ -0.5
COL25A1-201ENST00000399126 MS4A10Q96PG2 267 aa11.94□□□□□ -0.5
COL25A1-201ENST00000399126 FLNAP21333 2647 aaKnown RBP11.93□□□□□ -0.5
COL25A1-201ENST00000399126 HECTD1Q9ULT8 2610 aa11.93□□□□□ -0.5
COL25A1-201ENST00000399126 FAM90A2PQ658T7 463 aa11.93□□□□□ -0.5
COL25A1-201ENST00000399126 RBPMS2Q6ZRY4 209 aaKnown RBP11.93□□□□□ -0.5
COL25A1-201ENST00000399126 DUX5Q96PT3 197 aa11.93□□□□□ -0.5
COL25A1-201ENST00000399126 PAM16Q9Y3D7 125 aa11.93□□□□□ -0.5
COL25A1-201ENST00000399126 LINC01548A6NM66 108 aa11.93□□□□□ -0.5
COL25A1-201ENST00000399126 I3L2K1 104 aa11.93□□□□□ -0.5
COL25A1-201ENST00000399126 J3QKU1 62 aa11.93□□□□□ -0.5
COL25A1-201ENST00000399126 EGR2P11161 476 aaPredicted RBP11.93□□□□□ -0.5
COL25A1-201ENST00000399126 MEF2BQ02080 365 aaPredicted RBP11.93□□□□□ -0.5
COL25A1-201ENST00000399126 THAP8Q8NA92 274 aa11.93□□□□□ -0.5
COL25A1-201ENST00000399126 PIFOQ8TCI5 191 aa11.93□□□□□ -0.5
COL25A1-201ENST00000399126 UHRF2Q96PU4 802 aa11.93□□□□□ -0.5
COL25A1-201ENST00000399126 MEGF9Q9H1U4 602 aa11.93□□□□□ -0.5
COL25A1-201ENST00000399126 LAMTOR2Q9Y2Q5 125 aa11.93□□□□□ -0.5
COL25A1-201ENST00000399126 FASNP49327 2511 aaKnown RBP11.92□□□□□ -0.5
COL25A1-201ENST00000399126 AKAP9Q99996 3911 aa11.92□□□□□ -0.5
COL25A1-201ENST00000399126 TCRBV4S1A1TA0A5B7 111 aa11.92□□□□□ -0.5
COL25A1-201ENST00000399126 RHOBP62745 196 aa11.92□□□□□ -0.5
COL25A1-201ENST00000399126 PSMB11A5LHX3 300 aa11.92□□□□□ -0.5
COL25A1-201ENST00000399126 IFNA1P01562 189 aa11.92□□□□□ -0.5
COL25A1-201ENST00000399126 ATP5G3P48201 142 aa11.92□□□□□ -0.5
COL25A1-201ENST00000399126 MFAP4P55083 255 aa11.92□□□□□ -0.5
COL25A1-201ENST00000399126 RHOGP84095 191 aa11.92□□□□□ -0.5
COL25A1-201ENST00000399126 DEFB113Q30KQ7 82 aa11.92□□□□□ -0.5
COL25A1-201ENST00000399126 TDRG1Q3Y452 100 aa11.92□□□□□ -0.5
COL25A1-201ENST00000399126 C5orf47Q569G3 176 aa11.92□□□□□ -0.5
COL25A1-201ENST00000399126 TRAV5A0A0B4J249 113 aa11.91□□□□□ -0.5
COL25A1-201ENST00000399126 K7EIM0 57 aa11.91□□□□□ -0.5
COL25A1-201ENST00000399126 PSMB3P49720 205 aa11.91□□□□□ -0.5
COL25A1-201ENST00000399126 SAMD13Q5VXD3 122 aa11.91□□□□□ -0.5
COL25A1-201ENST00000399126 UNQ5815/PRO19632Q6UWF5 114 aa11.91□□□□□ -0.5
COL25A1-201ENST00000399126 TCF24Q7RTU0 167 aa11.91□□□□□ -0.5
COL25A1-201ENST00000399126 TNFRSF19Q9NS68 423 aa11.91□□□□□ -0.5
COL25A1-201ENST00000399126 FUT9Q9Y231 359 aa11.91□□□□□ -0.5
COL25A1-201ENST00000399126 MRPL23Q16540 153 aaKnown RBP11.91□□□□□ -0.5
COL25A1-201ENST00000399126 PATE2Q6UY27 113 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms