RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 PSMG4Q5JS54 123 aa15.68■□□□□ 0.1
TSPAN4-206ENST00000397408 WDR61Q9GZS3 305 aaKnown RBP15.68■□□□□ 0.1
TSPAN4-206ENST00000397408 PXMP4Q9Y6I8 212 aa15.68■□□□□ 0.1
TSPAN4-206ENST00000397408 U3KQK5 164 aa15.68■□□□□ 0.1
TSPAN4-206ENST00000397408 ELOA3CA0A087WX78 387 aaPredicted RBP15.67■□□□□ 0.1
TSPAN4-206ENST00000397408 C10orf113Q5VZT2 155 aa15.67■□□□□ 0.1
TSPAN4-206ENST00000397408 LINC00305Q7Z4B0 112 aa15.67■□□□□ 0.1
TSPAN4-206ENST00000397408 OR2T35Q8NGX2 323 aa15.67■□□□□ 0.1
TSPAN4-206ENST00000397408 TMEM37Q8WXS4 190 aa15.67■□□□□ 0.1
TSPAN4-206ENST00000397408 SPATA25Q9BR10 227 aa15.67■□□□□ 0.1
TSPAN4-206ENST00000397408 TENM3Q9P273 2699 aa15.66■□□□□ 0.1
TSPAN4-206ENST00000397408 RPL7P18124 248 aaKnown RBP15.66■□□□□ 0.1
TSPAN4-206ENST00000397408 OR1L4Q8NGR5 311 aa15.66■□□□□ 0.1
TSPAN4-206ENST00000397408 RCHY1Q96PM5 261 aa15.66■□□□□ 0.1
TSPAN4-206ENST00000397408 RSG1Q9BU20 258 aa15.66■□□□□ 0.1
TSPAN4-206ENST00000397408 SEPSECSQ9HD40 501 aaKnown RBP15.66■□□□□ 0.1
TSPAN4-206ENST00000397408 HUWE1Q7Z6Z7 4374 aaKnown RBP15.65■□□□□ 0.1
TSPAN4-206ENST00000397408 STAB2Q8WWQ8 2551 aa15.65■□□□□ 0.1
TSPAN4-206ENST00000397408 SOCS3O14543 225 aa15.65■□□□□ 0.1
TSPAN4-206ENST00000397408 APOC4P55056 127 aa15.65■□□□□ 0.1
TSPAN4-206ENST00000397408 PFDN5Q99471 154 aa15.65■□□□□ 0.1
TSPAN4-206ENST00000397408 RETNQ9HD89 108 aa15.65■□□□□ 0.1
TSPAN4-206ENST00000397408 DNAJC4Q9NNZ3 241 aa15.65■□□□□ 0.1
TSPAN4-206ENST00000397408 RNF24Q9Y225 148 aa15.65■□□□□ 0.1
TSPAN4-206ENST00000397408 NBEAL2Q6ZNJ1 2754 aa15.65■□□□□ 0.1
TSPAN4-206ENST00000397408 ATF4P18848 351 aaPredicted RBP15.64■□□□□ 0.09
TSPAN4-206ENST00000397408 MEOX2P50222 304 aa15.64■□□□□ 0.09
TSPAN4-206ENST00000397408 MORN5Q5VZ52 161 aa15.64■□□□□ 0.09
TSPAN4-206ENST00000397408 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.64■□□□□ 0.09
TSPAN4-206ENST00000397408 ZNF709Q8N972 641 aa15.64■□□□□ 0.09
TSPAN4-206ENST00000397408 C17orf77Q96MU5 243 aa15.64■□□□□ 0.09
TSPAN4-206ENST00000397408 KCNIP2Q9NS61 270 aa15.64■□□□□ 0.09
TSPAN4-206ENST00000397408 FXYD6-FXYD2A0A087WZ82 144 aa15.63■□□□□ 0.09
TSPAN4-206ENST00000397408 KNCNA6PVL3 124 aa15.63■□□□□ 0.09
TSPAN4-206ENST00000397408 IFNA5P01569 189 aa15.63■□□□□ 0.09
TSPAN4-206ENST00000397408 ID1P41134 155 aa15.63■□□□□ 0.09
TSPAN4-206ENST00000397408 PSMB3P49720 205 aa15.63■□□□□ 0.09
TSPAN4-206ENST00000397408 SAMD13Q5VXD3 122 aa15.63■□□□□ 0.09
TSPAN4-206ENST00000397408 AQP10Q96PS8 301 aa15.63■□□□□ 0.09
TSPAN4-206ENST00000397408 WFDC1Q9HC57 220 aa15.63■□□□□ 0.09
TSPAN4-206ENST00000397408 ISLRO14498 428 aa15.62■□□□□ 0.09
TSPAN4-206ENST00000397408 ACTL10Q5JWF8 245 aa15.62■□□□□ 0.09
TSPAN4-206ENST00000397408 STHQ8IWL8 128 aa15.62■□□□□ 0.09
TSPAN4-206ENST00000397408 SCGB1C1Q8TD33 95 aa15.62■□□□□ 0.09
TSPAN4-206ENST00000397408 C16orf92Q96LL3 132 aa15.62■□□□□ 0.09
TSPAN4-206ENST00000397408 LINC00052Q96N35 136 aa15.62■□□□□ 0.09
TSPAN4-206ENST00000397408 AGRNO00468 2067 aa15.62■□□□□ 0.09
TSPAN4-206ENST00000397408 KIR2DL5BA0A0G2JN68 375 aa15.61■□□□□ 0.09
TSPAN4-206ENST00000397408 KIR2DL5BA0A0G2JPC4 375 aa15.61■□□□□ 0.09
TSPAN4-206ENST00000397408 C17orf112F2Z3M2 114 aa15.61■□□□□ 0.09
TSPAN4-206ENST00000397408 GCSAMLQ5JQS6 135 aa15.61■□□□□ 0.09
TSPAN4-206ENST00000397408 KIR2DL5AQ8N109 375 aa15.61■□□□□ 0.09
TSPAN4-206ENST00000397408 KIR2DL5BQ8NHK3 375 aa15.61■□□□□ 0.09
TSPAN4-206ENST00000397408 G3V3Q6 166 aa15.6■□□□□ 0.09
TSPAN4-206ENST00000397408 MRPS12O15235 138 aaKnown RBP15.6■□□□□ 0.09
TSPAN4-206ENST00000397408 GATAD1Q8WUU5 269 aa15.6■□□□□ 0.09
TSPAN4-206ENST00000397408 A0A087X0K7 114 aa15.6■□□□□ 0.09
TSPAN4-206ENST00000397408 TRPT1Q86TN4 253 aaKnown RBP15.6■□□□□ 0.09
TSPAN4-206ENST00000397408 BPIFA4PQ86YQ2 179 aa15.6■□□□□ 0.09
TSPAN4-206ENST00000397408 INO80EQ8NBZ0 244 aaPredicted RBP15.6■□□□□ 0.09
TSPAN4-206ENST00000397408 PARD6GQ9BYG4 376 aaPredicted RBP15.6■□□□□ 0.09
TSPAN4-206ENST00000397408 TRAV5A0A0B4J249 113 aa15.59■□□□□ 0.09
TSPAN4-206ENST00000397408 UBE2CO00762 179 aa15.59■□□□□ 0.09
TSPAN4-206ENST00000397408 DEFB1P60022 68 aa15.59■□□□□ 0.09
TSPAN4-206ENST00000397408 C20orf173Q96LM9 149 aa15.59■□□□□ 0.09
TSPAN4-206ENST00000397408 CSTL1Q9H114 145 aa15.59■□□□□ 0.09
TSPAN4-206ENST00000397408 TNFSF18Q9UNG2 199 aa15.59■□□□□ 0.09
TSPAN4-206ENST00000397408 RNF222A6NCQ9 220 aa15.58■□□□□ 0.08
TSPAN4-206ENST00000397408 SMLR1H3BR10 107 aa15.58■□□□□ 0.08
TSPAN4-206ENST00000397408 DEFB135Q30KP9 77 aa15.58■□□□□ 0.08
TSPAN4-206ENST00000397408 TRAV8-2A0A0B4J237 113 aa15.57■□□□□ 0.08
TSPAN4-206ENST00000397408 SNRPCP09234 159 aaKnown RBP15.57■□□□□ 0.08
TSPAN4-206ENST00000397408 ZNF266Q14584 549 aa15.57■□□□□ 0.08
TSPAN4-206ENST00000397408 FFAR4Q5NUL3 377 aa15.57■□□□□ 0.08
TSPAN4-206ENST00000397408 FAM78BQ5VT40 261 aa15.57■□□□□ 0.08
TSPAN4-206ENST00000397408 IGFL4Q6B9Z1 124 aa15.57■□□□□ 0.08
TSPAN4-206ENST00000397408 Q6ZWC4 215 aa15.57■□□□□ 0.08
TSPAN4-206ENST00000397408 CA1P00915 261 aaPredicted RBP15.56■□□□□ 0.08
TSPAN4-206ENST00000397408 RNF182Q8N6D2 247 aa15.56■□□□□ 0.08
TSPAN4-206ENST00000397408 LRRC20Q8TCA0 184 aa15.56■□□□□ 0.08
TSPAN4-206ENST00000397408 H3BMM0 161 aa15.55■□□□□ 0.08
TSPAN4-206ENST00000397408 IGLC2P0DOY2 106 aa15.55■□□□□ 0.08
TSPAN4-206ENST00000397408 HLA-DRB4P13762 266 aa15.55■□□□□ 0.08
TSPAN4-206ENST00000397408 GDF5OSQ5U4N7 250 aa15.55■□□□□ 0.08
TSPAN4-206ENST00000397408 SPATA31B1PQ5VZV4 182 aa15.55■□□□□ 0.08
TSPAN4-206ENST00000397408 LCN15Q6UWW0 184 aa15.55■□□□□ 0.08
TSPAN4-206ENST00000397408 FOXI2Q6ZQN5 318 aa15.55■□□□□ 0.08
TSPAN4-206ENST00000397408 OVOL2Q9BRP0 275 aa15.55■□□□□ 0.08
TSPAN4-206ENST00000397408 SAV1Q9H4B6 383 aaPredicted RBP15.55■□□□□ 0.08
TSPAN4-206ENST00000397408 RPRMQ9NS64 109 aa15.55■□□□□ 0.08
TSPAN4-206ENST00000397408 RFNGQ9Y644 331 aa15.55■□□□□ 0.08
TSPAN4-206ENST00000397408 HLA-DRB4X5D2U9 266 aa15.55■□□□□ 0.08
TSPAN4-206ENST00000397408 H3BTX0 84 aa15.54■□□□□ 0.08
TSPAN4-206ENST00000397408 ARPC5O15511 151 aa15.54■□□□□ 0.08
TSPAN4-206ENST00000397408 SPP1P10451 314 aa15.54■□□□□ 0.08
TSPAN4-206ENST00000397408 CXCL2P19875 107 aa15.54■□□□□ 0.08
TSPAN4-206ENST00000397408 Q6ZNX1 250 aa15.54■□□□□ 0.08
TSPAN4-206ENST00000397408 MIR17HGQ75NE6 70 aa15.54■□□□□ 0.08
TSPAN4-206ENST00000397408 HSD17B11Q8NBQ5 300 aa15.54■□□□□ 0.08
TSPAN4-206ENST00000397408 WWC2-AS2Q96NR7 200 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms