RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 PAX9P55771 341 aa2.73□□□□□ -1.97
VPS13C-203ENST00000395896 RNF144BQ7Z419 303 aa2.73□□□□□ -1.97
VPS13C-203ENST00000395896 RNF152Q8N8N0 203 aa2.73□□□□□ -1.97
VPS13C-203ENST00000395896 FAM110DQ8TAY7 271 aaPredicted RBP2.73□□□□□ -1.97
VPS13C-203ENST00000395896 OR4C46A6NHA9 309 aa2.73□□□□□ -1.97
VPS13C-203ENST00000395896 WT1-ASQ06250 92 aa2.73□□□□□ -1.97
VPS13C-203ENST00000395896 PRR30Q53SZ7 412 aaPredicted RBP2.73□□□□□ -1.97
VPS13C-203ENST00000395896 GOLT1AQ6ZVE7 132 aa2.73□□□□□ -1.97
VPS13C-203ENST00000395896 SSX7Q7RTT5 188 aa2.73□□□□□ -1.97
VPS13C-203ENST00000395896 GPR61Q9BZJ8 451 aa2.73□□□□□ -1.97
VPS13C-203ENST00000395896 WIPF3A6NGB9 483 aa2.73□□□□□ -1.97
VPS13C-203ENST00000395896 ELANEP08246 267 aa2.73□□□□□ -1.97
VPS13C-203ENST00000395896 SOD3P08294 240 aa2.73□□□□□ -1.97
VPS13C-203ENST00000395896 RPL23P62829 140 aaKnown RBP2.73□□□□□ -1.97
VPS13C-203ENST00000395896 ICAM4Q14773 271 aa2.73□□□□□ -1.97
VPS13C-203ENST00000395896 Q9H3A6 140 aa2.73□□□□□ -1.97
VPS13C-203ENST00000395896 NXT2Q9NPJ8 142 aaKnown RBP2.73□□□□□ -1.97
VPS13C-203ENST00000395896 TRAV21A0A0B4J279 112 aa2.72□□□□□ -1.97
VPS13C-203ENST00000395896 TMEM189A5PLL7 270 aa2.72□□□□□ -1.97
VPS13C-203ENST00000395896 M0R143 59 aa2.72□□□□□ -1.97
VPS13C-203ENST00000395896 NDUFA3O95167 84 aa2.72□□□□□ -1.97
VPS13C-203ENST00000395896 LEPROTL1O95214 131 aa2.72□□□□□ -1.97
VPS13C-203ENST00000395896 BTF3P20290 206 aaKnown RBP2.72□□□□□ -1.97
VPS13C-203ENST00000395896 DGAT2L7PQ6IED9 249 aa2.72□□□□□ -1.97
VPS13C-203ENST00000395896 TMEM86BQ8N661 226 aa2.72□□□□□ -1.97
VPS13C-203ENST00000395896 THAP8Q8NA92 274 aa2.72□□□□□ -1.97
VPS13C-203ENST00000395896 LY6G5BQ8NDX9 201 aa2.72□□□□□ -1.97
VPS13C-203ENST00000395896 C2CD4CQ8TF44 421 aa2.72□□□□□ -1.97
VPS13C-203ENST00000395896 ZNF98A6NK75 572 aa2.72□□□□□ -1.97
VPS13C-203ENST00000395896 J3QKU1 62 aa2.72□□□□□ -1.97
VPS13C-203ENST00000395896 LRRC75A-AS1Q8N1F1 130 aa2.72□□□□□ -1.97
VPS13C-203ENST00000395896 APCSP02743 223 aa2.72□□□□□ -1.97
VPS13C-203ENST00000395896 COL8A2P25067 703 aa2.72□□□□□ -1.97
VPS13C-203ENST00000395896 RNF114Q9Y508 228 aa2.72□□□□□ -1.97
VPS13C-203ENST00000395896 TMEM183AQ8IXX5 376 aa2.72□□□□□ -1.97
VPS13C-203ENST00000395896 P0C879 139 aa2.72□□□□□ -1.97
VPS13C-203ENST00000395896 RAX2Q96IS3 184 aa2.72□□□□□ -1.97
VPS13C-203ENST00000395896 AMBPP02760 352 aa2.72□□□□□ -1.97
VPS13C-203ENST00000395896 ADORA2A-AS1P86434 159 aa2.72□□□□□ -1.97
VPS13C-203ENST00000395896 PRR20EP86478 221 aa2.72□□□□□ -1.97
VPS13C-203ENST00000395896 PRR20CP86479 221 aa2.72□□□□□ -1.97
VPS13C-203ENST00000395896 PRR20DP86480 221 aa2.72□□□□□ -1.97
VPS13C-203ENST00000395896 PRR20BP86481 221 aa2.72□□□□□ -1.97
VPS13C-203ENST00000395896 PRR20AP86496 221 aa2.72□□□□□ -1.97
VPS13C-203ENST00000395896 ZNF738Q8NE65 137 aa2.72□□□□□ -1.97
VPS13C-203ENST00000395896 PSMB11A5LHX3 300 aa2.72□□□□□ -1.97
VPS13C-203ENST00000395896 AMY1AP04745 511 aa2.72□□□□□ -1.97
VPS13C-203ENST00000395896 CRYGCP07315 174 aa2.72□□□□□ -1.97
VPS13C-203ENST00000395896 NTF3P20783 257 aa2.72□□□□□ -1.97
VPS13C-203ENST00000395896 LYRM7Q5U5X0 104 aa2.72□□□□□ -1.97
VPS13C-203ENST00000395896 TTC9CQ8N5M4 171 aa2.72□□□□□ -1.97
VPS13C-203ENST00000395896 NRN1Q9NPD7 142 aa2.72□□□□□ -1.97
VPS13C-203ENST00000395896 STAB2Q8WWQ8 2551 aa2.72□□□□□ -1.97
VPS13C-203ENST00000395896 GPX1P07203 203 aa2.72□□□□□ -1.97
VPS13C-203ENST00000395896 A0A0G2JRQ6 117 aa2.72□□□□□ -1.97
VPS13C-203ENST00000395896 ZNF138P52744 262 aa2.72□□□□□ -1.97
VPS13C-203ENST00000395896 TMEM75Q8N9X5 138 aa2.72□□□□□ -1.97
VPS13C-203ENST00000395896 TYMSP04818 313 aa2.72□□□□□ -1.97
VPS13C-203ENST00000395896 REG1AP05451 166 aa2.72□□□□□ -1.97
VPS13C-203ENST00000395896 TFF3Q07654 80 aa2.72□□□□□ -1.97
VPS13C-203ENST00000395896 LYPD2Q6UXB3 125 aa2.72□□□□□ -1.97
VPS13C-203ENST00000395896 SIGLEC15Q6ZMC9 328 aa2.72□□□□□ -1.97
VPS13C-203ENST00000395896 PRNTQ86SH4 94 aa2.72□□□□□ -1.97
VPS13C-203ENST00000395896 ZNHIT1O43257 154 aa2.72□□□□□ -1.97
VPS13C-203ENST00000395896 TRGC2P03986 189 aa2.72□□□□□ -1.97
VPS13C-203ENST00000395896 TCRAP04437 139 aa2.72□□□□□ -1.97
VPS13C-203ENST00000395896 Q6ZN92 141 aa2.72□□□□□ -1.97
VPS13C-203ENST00000395896 WFDC12Q8WWY7 111 aa2.72□□□□□ -1.97
VPS13C-203ENST00000395896 VPREB3Q9UKI3 123 aa2.72□□□□□ -1.97
VPS13C-203ENST00000395896 RBAKDNA6NC62 111 aa2.72□□□□□ -1.97
VPS13C-203ENST00000395896 NDUFA4O00483 81 aa2.72□□□□□ -1.97
VPS13C-203ENST00000395896 OR10J3Q5JRS4 329 aa2.72□□□□□ -1.97
VPS13C-203ENST00000395896 TOMM20LQ6UXN7 152 aa2.72□□□□□ -1.97
VPS13C-203ENST00000395896 C12orf54Q6X4T0 127 aa2.72□□□□□ -1.97
VPS13C-203ENST00000395896 HS3ST6Q96QI5 342 aa2.72□□□□□ -1.97
VPS13C-203ENST00000395896 LOC105371267A0A1B0GV96 52 aa2.71□□□□□ -1.97
VPS13C-203ENST00000395896 CACNG7P62955 275 aa2.71□□□□□ -1.97
VPS13C-203ENST00000395896 OR10W1Q8NGF6 305 aa2.71□□□□□ -1.97
VPS13C-203ENST00000395896 IGLC7A0M8Q6 106 aa2.71□□□□□ -1.98
VPS13C-203ENST00000395896 MAP1LC3AQ9H492 121 aa2.71□□□□□ -1.98
VPS13C-203ENST00000395896 A0A1W2PRD5 423 aa2.71□□□□□ -1.98
VPS13C-203ENST00000395896 A0A1W2PRF3 423 aa2.71□□□□□ -1.98
VPS13C-203ENST00000395896 A0A1W2PRM7 423 aa2.71□□□□□ -1.98
VPS13C-203ENST00000395896 PMS2P5A8MQ11 134 aa2.71□□□□□ -1.98
VPS13C-203ENST00000395896 IGKV1-39P01597 117 aa2.71□□□□□ -1.98
VPS13C-203ENST00000395896 IGKV1D-39P04432 117 aa2.71□□□□□ -1.98
VPS13C-203ENST00000395896 APELAP0DMC3 54 aa2.71□□□□□ -1.98
VPS13C-203ENST00000395896 LOXL1Q08397 574 aaPredicted RBP2.71□□□□□ -1.98
VPS13C-203ENST00000395896 FOXE3Q13461 319 aa2.71□□□□□ -1.98
VPS13C-203ENST00000395896 SGK494Q96LW2 274 aa2.71□□□□□ -1.98
VPS13C-203ENST00000395896 SHANK2-AS3Q9BTD1 123 aa2.71□□□□□ -1.98
VPS13C-203ENST00000395896 REG4Q9BYZ8 158 aa2.71□□□□□ -1.98
VPS13C-203ENST00000395896 PEF1Q9UBV8 284 aaKnown RBP2.71□□□□□ -1.98
VPS13C-203ENST00000395896 COL27A1Q8IZC6 1860 aaPredicted RBP2.71□□□□□ -1.98
VPS13C-203ENST00000395896 IGLC1P0CG04 106 aa2.71□□□□□ -1.98
VPS13C-203ENST00000395896 OR10D4PQ8NGN7 298 aa2.71□□□□□ -1.98
VPS13C-203ENST00000395896 RPP21Q9H633 154 aaKnown RBP2.71□□□□□ -1.98
VPS13C-203ENST00000395896 CTSZQ9UBR2 303 aa2.71□□□□□ -1.98
VPS13C-203ENST00000395896 SNCGO76070 127 aa2.71□□□□□ -1.98
VPS13C-203ENST00000395896 IER3P46695 156 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms