RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 SIX6O95475 246 aa9.5□□□□□ -0.89
VCPKMT-201ENST00000395859 IFNA7P01567 189 aa9.5□□□□□ -0.89
VCPKMT-201ENST00000395859 HOXB5P09067 269 aa9.5□□□□□ -0.89
VCPKMT-201ENST00000395859 LGALSLQ3ZCW2 172 aaPredicted RBP9.5□□□□□ -0.89
VCPKMT-201ENST00000395859 NMSQ5H8A3 153 aa9.5□□□□□ -0.89
VCPKMT-201ENST00000395859 KCNRGQ8N5I3 272 aa9.5□□□□□ -0.89
VCPKMT-201ENST00000395859 SLC35G3Q8N808 338 aa9.5□□□□□ -0.89
VCPKMT-201ENST00000395859 OR1L8Q8NGR8 309 aa9.5□□□□□ -0.89
VCPKMT-201ENST00000395859 AQP10Q96PS8 301 aa9.5□□□□□ -0.89
VCPKMT-201ENST00000395859 Q9H8V8 135 aa9.5□□□□□ -0.89
VCPKMT-201ENST00000395859 FKBP11Q9NYL4 201 aa9.5□□□□□ -0.89
VCPKMT-201ENST00000395859 NSG2Q9Y328 171 aa9.5□□□□□ -0.89
VCPKMT-201ENST00000395859 PUS1Q9Y606 427 aaKnown RBP eCLIP9.5□□□□□ -0.89
VCPKMT-201ENST00000395859 MARCH11A6NNE9 402 aa9.49□□□□□ -0.89
VCPKMT-201ENST00000395859 NKX2-5P52952 324 aaPredicted RBP9.49□□□□□ -0.89
VCPKMT-201ENST00000395859 RPL11P62913 178 aaKnown RBP9.49□□□□□ -0.89
VCPKMT-201ENST00000395859 ICAM4Q14773 271 aa9.49□□□□□ -0.89
VCPKMT-201ENST00000395859 LYZL2Q7Z4W2 148 aa9.49□□□□□ -0.89
VCPKMT-201ENST00000395859 SLC51BQ86UW2 128 aa9.49□□□□□ -0.89
VCPKMT-201ENST00000395859 STXBP6Q8NFX7 210 aa9.49□□□□□ -0.89
VCPKMT-201ENST00000395859 OR4D5Q8NGN0 318 aa9.49□□□□□ -0.89
VCPKMT-201ENST00000395859 PHYHIPLQ96FC7 376 aa9.49□□□□□ -0.89
VCPKMT-201ENST00000395859 SEC22AQ96IW7 307 aa9.49□□□□□ -0.89
VCPKMT-201ENST00000395859 FXYD6-FXYD2A0A087WZ82 144 aa9.48□□□□□ -0.89
VCPKMT-201ENST00000395859 A0A1W2PPQ1 181 aa9.48□□□□□ -0.89
VCPKMT-201ENST00000395859 KANTRA0A1W2PQU2 76 aa9.48□□□□□ -0.89
VCPKMT-201ENST00000395859 CCSO14618 274 aa9.48□□□□□ -0.89
VCPKMT-201ENST00000395859 ARPC5O15511 151 aa9.48□□□□□ -0.89
VCPKMT-201ENST00000395859 PITX3O75364 302 aa9.48□□□□□ -0.89
VCPKMT-201ENST00000395859 MED6O75586 246 aa9.48□□□□□ -0.89
VCPKMT-201ENST00000395859 LPAR6P43657 344 aa9.48□□□□□ -0.89
VCPKMT-201ENST00000395859 P2RY1P47900 373 aa9.48□□□□□ -0.89
VCPKMT-201ENST00000395859 AP2S1P53680 142 aaPredicted RBP9.48□□□□□ -0.89
VCPKMT-201ENST00000395859 MFAP4P55083 255 aa9.48□□□□□ -0.89
VCPKMT-201ENST00000395859 CCL18P55774 89 aa9.48□□□□□ -0.89
VCPKMT-201ENST00000395859 TAS2R30P59541 319 aa9.48□□□□□ -0.89
VCPKMT-201ENST00000395859 NUTF2P61970 127 aaKnown RBP9.48□□□□□ -0.89
VCPKMT-201ENST00000395859 ID3Q02535 119 aa9.48□□□□□ -0.89
VCPKMT-201ENST00000395859 SP6Q3SY56 376 aa9.48□□□□□ -0.89
VCPKMT-201ENST00000395859 TTC32Q5I0X7 151 aa9.48□□□□□ -0.89
VCPKMT-201ENST00000395859 YTHDF2Q9Y5A9 579 aaKnown RBP9.48□□□□□ -0.89
VCPKMT-201ENST00000395859 TNXBP22105 4242 aa9.48□□□□□ -0.89
VCPKMT-201ENST00000395859 SMLR1H3BR10 107 aa9.47□□□□□ -0.89
VCPKMT-201ENST00000395859 NKX2-1P43699 371 aaPredicted RBP9.47□□□□□ -0.89
VCPKMT-201ENST00000395859 OPCMLQ14982 345 aa9.47□□□□□ -0.89
VCPKMT-201ENST00000395859 AARDQ4LEZ3 155 aa9.47□□□□□ -0.89
VCPKMT-201ENST00000395859 EIF5AL1Q6IS14 154 aaKnown RBP9.47□□□□□ -0.89
VCPKMT-201ENST00000395859 TMUB2Q71RG4 321 aa9.47□□□□□ -0.89
VCPKMT-201ENST00000395859 OR1P1Q8NH06 330 aa9.47□□□□□ -0.89
VCPKMT-201ENST00000395859 LHFPL5Q8TAF8 219 aa9.47□□□□□ -0.89
VCPKMT-201ENST00000395859 ARL6Q9H0F7 186 aa9.47□□□□□ -0.89
VCPKMT-201ENST00000395859 GSKIPQ9P0R6 139 aa9.47□□□□□ -0.89
VCPKMT-201ENST00000395859 MBD2Q9UBB5 411 aa9.47□□□□□ -0.89
VCPKMT-201ENST00000395859 PRNDQ9UKY0 176 aa9.47□□□□□ -0.89
VCPKMT-201ENST00000395859 K7EPK0 472 aa9.46□□□□□ -0.9
VCPKMT-201ENST00000395859 BCL2L11O43521 198 aa9.46□□□□□ -0.9
VCPKMT-201ENST00000395859 KRASP01116 189 aa9.46□□□□□ -0.9
VCPKMT-201ENST00000395859 CRYBB3P26998 211 aa9.46□□□□□ -0.9
VCPKMT-201ENST00000395859 AKR1C2P52895 323 aa9.46□□□□□ -0.9
VCPKMT-201ENST00000395859 DLK1P80370 383 aa9.46□□□□□ -0.9
VCPKMT-201ENST00000395859 BAXQ07812 192 aa9.46□□□□□ -0.9
VCPKMT-201ENST00000395859 RAB32Q13637 225 aa9.46□□□□□ -0.9
VCPKMT-201ENST00000395859 USF2Q15853 346 aaPredicted RBP9.46□□□□□ -0.9
VCPKMT-201ENST00000395859 Q5BKY6 102 aa9.46□□□□□ -0.9
VCPKMT-201ENST00000395859 PSMG4Q5JS54 123 aa9.46□□□□□ -0.9
VCPKMT-201ENST00000395859 TEX261Q6UWH6 196 aa9.46□□□□□ -0.9
VCPKMT-201ENST00000395859 SSX7Q7RTT5 188 aa9.46□□□□□ -0.9
VCPKMT-201ENST00000395859 RNASE11Q8TAA1 199 aaKnown RBP9.46□□□□□ -0.9
VCPKMT-201ENST00000395859 LRRC20Q8TCA0 184 aa9.46□□□□□ -0.9
VCPKMT-201ENST00000395859 CIB3Q96Q77 187 aaPredicted RBP9.46□□□□□ -0.9
VCPKMT-201ENST00000395859 ARPC5LQ9BPX5 153 aa9.46□□□□□ -0.9
VCPKMT-201ENST00000395859 SLC25A31Q9H0C2 315 aa9.46□□□□□ -0.9
VCPKMT-201ENST00000395859 TMEM231Q9H6L2 316 aa9.46□□□□□ -0.9
VCPKMT-201ENST00000395859 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.46□□□□□ -0.9
VCPKMT-201ENST00000395859 OR51B2Q9Y5P1 312 aa9.46□□□□□ -0.9
VCPKMT-201ENST00000395859 U3KQ87 197 aa9.46□□□□□ -0.9
VCPKMT-201ENST00000395859 RNF222A6NCQ9 220 aa9.45□□□□□ -0.9
VCPKMT-201ENST00000395859 WRBO00258 174 aa9.45□□□□□ -0.9
VCPKMT-201ENST00000395859 P0C879 139 aa9.45□□□□□ -0.9
VCPKMT-201ENST00000395859 HLA-DRB4P13762 266 aa9.45□□□□□ -0.9
VCPKMT-201ENST00000395859 CXCL2P19875 107 aa9.45□□□□□ -0.9
VCPKMT-201ENST00000395859 G6PCP35575 357 aa9.45□□□□□ -0.9
VCPKMT-201ENST00000395859 ATP5IP56385 69 aaPredicted RBP9.45□□□□□ -0.9
VCPKMT-201ENST00000395859 DAD1P61803 113 aa9.45□□□□□ -0.9
VCPKMT-201ENST00000395859 ZNF600Q6ZNG1 722 aa9.45□□□□□ -0.9
VCPKMT-201ENST00000395859 ZNF709Q8N972 641 aa9.45□□□□□ -0.9
VCPKMT-201ENST00000395859 OR52E5Q8NH55 327 aa9.45□□□□□ -0.9
VCPKMT-201ENST00000395859 STOML3Q8TAV4 291 aa9.45□□□□□ -0.9
VCPKMT-201ENST00000395859 UPK3BQ9BT76 320 aa9.45□□□□□ -0.9
VCPKMT-201ENST00000395859 HINT2Q9BX68 163 aa9.45□□□□□ -0.9
VCPKMT-201ENST00000395859 HLA-DRB4X5D2U9 266 aa9.45□□□□□ -0.9
VCPKMT-201ENST00000395859 RPS10-NUDT3A0A1W2PQS6 291 aa9.44□□□□□ -0.9
VCPKMT-201ENST00000395859 A0A1W2PS18 150 aa9.44□□□□□ -0.9
VCPKMT-201ENST00000395859 HELTA6NFD8 242 aa9.44□□□□□ -0.9
VCPKMT-201ENST00000395859 NUDT3O95989 172 aa9.44□□□□□ -0.9
VCPKMT-201ENST00000395859 MT-CO2P00403 227 aa9.44□□□□□ -0.9
VCPKMT-201ENST00000395859 IGHV3-48P01763 117 aa9.44□□□□□ -0.9
VCPKMT-201ENST00000395859 MBPP02686 304 aaPredicted RBP9.44□□□□□ -0.9
VCPKMT-201ENST00000395859 S100A10P60903 97 aa9.44□□□□□ -0.9
VCPKMT-201ENST00000395859 IFITM2Q01629 132 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms