RNA–Protein interactions for RNA: ENST00000395194.1

COL11A2-204, Transcript of collagen type XI alpha 2 chain, humanhuman

TSL 1 (best) BASIC

Gene COL11A2, Length 1,194 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-204ENST00000395194 FAM210BQ96KR6 192 aa13.64□□□□□ -0.23
COL11A2-204ENST00000395194 IGF2BP2-AS1Q96M15 143 aa13.64□□□□□ -0.23
COL11A2-204ENST00000395194 CIB3Q96Q77 187 aaPredicted RBP13.64□□□□□ -0.23
COL11A2-204ENST00000395194 TMEM147Q9BVK8 224 aa13.64□□□□□ -0.23
COL11A2-204ENST00000395194 PIGBOS1A0A0B4J2F0 54 aa13.63□□□□□ -0.23
COL11A2-204ENST00000395194 SMCO3A2RU48 225 aa13.63□□□□□ -0.23
COL11A2-204ENST00000395194 ZNF705GA8MUZ8 300 aaPredicted RBP13.63□□□□□ -0.23
COL11A2-204ENST00000395194 SFT2D2O95562 160 aa13.63□□□□□ -0.23
COL11A2-204ENST00000395194 MED14OSP0DP75 135 aa13.63□□□□□ -0.23
COL11A2-204ENST00000395194 SLC25A6P12236 298 aa13.63□□□□□ -0.23
COL11A2-204ENST00000395194 CNN1P51911 297 aaKnown RBP13.63□□□□□ -0.23
COL11A2-204ENST00000395194 RPP30P78346 268 aaKnown RBP13.63□□□□□ -0.23
COL11A2-204ENST00000395194 OXA1LQ15070 435 aa13.63□□□□□ -0.23
COL11A2-204ENST00000395194 SAMD13Q5VXD3 122 aa13.63□□□□□ -0.23
COL11A2-204ENST00000395194 Q6ZR54 194 aa13.63□□□□□ -0.23
COL11A2-204ENST00000395194 LRTM2Q8N967 370 aa13.63□□□□□ -0.23
COL11A2-204ENST00000395194 OR11H7Q8NGC8 314 aa13.63□□□□□ -0.23
COL11A2-204ENST00000395194 TMED3Q9Y3Q3 217 aa13.63□□□□□ -0.23
COL11A2-204ENST00000395194 TRAV8-2A0A0B4J237 113 aa13.62□□□□□ -0.23
COL11A2-204ENST00000395194 CFDP00746 253 aaPredicted RBP13.62□□□□□ -0.23
COL11A2-204ENST00000395194 AP3S2P59780 193 aa13.62□□□□□ -0.23
COL11A2-204ENST00000395194 BAP18Q8IXM2 172 aa13.62□□□□□ -0.23
COL11A2-204ENST00000395194 SLC45A2Q9UMX9 530 aa13.62□□□□□ -0.23
COL11A2-204ENST00000395194 V9GYH0 126 aa13.62□□□□□ -0.23
COL11A2-204ENST00000395194 A8MTW9 85 aa13.61□□□□□ -0.23
COL11A2-204ENST00000395194 ZNF575Q86XF7 245 aa13.61□□□□□ -0.23
COL11A2-204ENST00000395194 STRAPQ9Y3F4 350 aaKnown RBP13.61□□□□□ -0.23
COL11A2-204ENST00000395194 TRAV12-2A0A075B6T6 113 aa13.6□□□□□ -0.23
COL11A2-204ENST00000395194 CRXO43186 299 aaPredicted RBP13.6□□□□□ -0.23
COL11A2-204ENST00000395194 INSP01308 110 aa13.6□□□□□ -0.23
COL11A2-204ENST00000395194 ZNF738Q8NE65 137 aa13.6□□□□□ -0.23
COL11A2-204ENST00000395194 SLC25A39Q9BZJ4 359 aaPredicted RBP13.6□□□□□ -0.23
COL11A2-204ENST00000395194 H3BRN7 92 aa13.59□□□□□ -0.23
COL11A2-204ENST00000395194 ADAP1O75689 374 aa13.59□□□□□ -0.23
COL11A2-204ENST00000395194 DUSP14O95147 198 aaKnown RBP13.59□□□□□ -0.23
COL11A2-204ENST00000395194 DEFB130BP0DP73 79 aa13.59□□□□□ -0.23
COL11A2-204ENST00000395194 DEFB130AP0DP74 79 aa13.59□□□□□ -0.23
COL11A2-204ENST00000395194 POLR2GP62487 172 aaKnown RBP eCLIP13.59□□□□□ -0.23
COL11A2-204ENST00000395194 FCN2Q15485 313 aa13.59□□□□□ -0.23
COL11A2-204ENST00000395194 RNF212Q495C1 297 aa13.59□□□□□ -0.23
COL11A2-204ENST00000395194 CYP2G1PQ6ZSU1 146 aa13.59□□□□□ -0.23
COL11A2-204ENST00000395194 OR4D5Q8NGN0 318 aa13.59□□□□□ -0.23
COL11A2-204ENST00000395194 GPR82Q96P67 336 aa13.59□□□□□ -0.23
COL11A2-204ENST00000395194 SLC25A21Q9BQT8 299 aaPredicted RBP13.59□□□□□ -0.23
COL11A2-204ENST00000395194 CCNKO75909 580 aa13.58□□□□□ -0.24
COL11A2-204ENST00000395194 IL5P05113 134 aa13.58□□□□□ -0.24
COL11A2-204ENST00000395194 RRAS2P62070 204 aaPredicted RBP13.58□□□□□ -0.24
COL11A2-204ENST00000395194 HIST1H1AQ02539 215 aaPredicted RBP13.58□□□□□ -0.24
COL11A2-204ENST00000395194 UHRF2Q96PU4 802 aa13.58□□□□□ -0.24
COL11A2-204ENST00000395194 HIGD1AQ9Y241 93 aa13.58□□□□□ -0.24
COL11A2-204ENST00000395194 OR5G3P0C626 314 aa13.57□□□□□ -0.24
COL11A2-204ENST00000395194 AZU1P20160 251 aa13.57□□□□□ -0.24
COL11A2-204ENST00000395194 RAP2BP61225 183 aa13.57□□□□□ -0.24
COL11A2-204ENST00000395194 SOHLH1Q5JUK2 328 aa13.57□□□□□ -0.24
COL11A2-204ENST00000395194 C1orf134Q5TEV5 83 aa13.57□□□□□ -0.24
COL11A2-204ENST00000395194 TMEM144Q7Z5S9 345 aa13.57□□□□□ -0.24
COL11A2-204ENST00000395194 ATG101Q9BSB4 218 aa13.57□□□□□ -0.24
COL11A2-204ENST00000395194 SHANK2-AS3Q9BTD1 123 aa13.57□□□□□ -0.24
COL11A2-204ENST00000395194 PSENENQ9NZ42 101 aa13.57□□□□□ -0.24
COL11A2-204ENST00000395194 ABCA13Q86UQ4 5058 aa13.57□□□□□ -0.24
COL11A2-204ENST00000395194 HSPG2P98160 4391 aa13.56□□□□□ -0.24
COL11A2-204ENST00000395194 BOLA2-SMG1P6H3BVE0 249 aa13.56□□□□□ -0.24
COL11A2-204ENST00000395194 SSSCA1O60232 199 aa13.56□□□□□ -0.24
COL11A2-204ENST00000395194 LINC00869P0C866 280 aa13.56□□□□□ -0.24
COL11A2-204ENST00000395194 RHOBP62745 196 aa13.56□□□□□ -0.24
COL11A2-204ENST00000395194 C15orf53Q8NAA6 179 aa13.56□□□□□ -0.24
COL11A2-204ENST00000395194 CCDC160A6NGH7 325 aa13.55□□□□□ -0.24
COL11A2-204ENST00000395194 LYRM9A8MSI8 78 aa13.55□□□□□ -0.24
COL11A2-204ENST00000395194 F5H768 121 aa13.55□□□□□ -0.24
COL11A2-204ENST00000395194 HYPMO75409 117 aa13.55□□□□□ -0.24
COL11A2-204ENST00000395194 HTN1P15515 57 aa13.55□□□□□ -0.24
COL11A2-204ENST00000395194 RPL7P18124 248 aaKnown RBP13.55□□□□□ -0.24
COL11A2-204ENST00000395194 S100A7P31151 101 aa13.55□□□□□ -0.24
COL11A2-204ENST00000395194 S100A5P33763 92 aa13.55□□□□□ -0.24
COL11A2-204ENST00000395194 PLAC8L1A1L4L8 177 aa13.54□□□□□ -0.24
COL11A2-204ENST00000395194 C9orf170A2RU37 121 aa13.54□□□□□ -0.24
COL11A2-204ENST00000395194 NUDT3O95989 172 aa13.54□□□□□ -0.24
COL11A2-204ENST00000395194 SNRPCP09234 159 aaKnown RBP13.54□□□□□ -0.24
COL11A2-204ENST00000395194 ID3Q02535 119 aa13.54□□□□□ -0.24
COL11A2-204ENST00000395194 LRRC20Q8TCA0 184 aa13.54□□□□□ -0.24
COL11A2-204ENST00000395194 LINC01587Q99440 93 aa13.54□□□□□ -0.24
COL11A2-204ENST00000395194 PPP1R14DQ9NXH3 145 aa13.54□□□□□ -0.24
COL11A2-204ENST00000395194 FLVCR2Q9UPI3 526 aa13.54□□□□□ -0.24
COL11A2-204ENST00000395194 LRP1BQ9NZR2 4599 aa13.53□□□□□ -0.24
COL11A2-204ENST00000395194 PMS2P5A8MQ11 134 aa13.53□□□□□ -0.24
COL11A2-204ENST00000395194 SCGB1D2O95969 90 aa13.53□□□□□ -0.24
COL11A2-204ENST00000395194 METTL15P1P0C7V9 234 aa13.53□□□□□ -0.24
COL11A2-204ENST00000395194 CXCL3P19876 107 aa13.53□□□□□ -0.24
COL11A2-204ENST00000395194 OR8A1Q8NGG7 326 aa13.53□□□□□ -0.24
COL11A2-204ENST00000395194 ARL6Q9H0F7 186 aa13.53□□□□□ -0.24
COL11A2-204ENST00000395194 LINC00854A0A1B0GVQ3 168 aa13.52□□□□□ -0.25
COL11A2-204ENST00000395194 B2MP61769 119 aa13.52□□□□□ -0.25
COL11A2-204ENST00000395194 SLC38A11Q08AI6 406 aa13.52□□□□□ -0.25
COL11A2-204ENST00000395194 PSG3Q16557 428 aa13.52□□□□□ -0.25
COL11A2-204ENST00000395194 CCDC190Q86UF4 302 aa13.52□□□□□ -0.25
COL11A2-204ENST00000395194 TSPOP30536 169 aa13.51□□□□□ -0.25
COL11A2-204ENST00000395194 UBE2MP61081 183 aaKnown RBP13.51□□□□□ -0.25
COL11A2-204ENST00000395194 TNP2Q05952 138 aa13.51□□□□□ -0.25
COL11A2-204ENST00000395194 PATE2Q6UY27 113 aa13.51□□□□□ -0.25
COL11A2-204ENST00000395194 DEDD2Q8WXF8 326 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms