RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 RANP62826 216 aaKnown RBP11.04□□□□□ -0.64
SNCA-204ENST00000394989 PAFAH1B2P68402 229 aa11.04□□□□□ -0.64
SNCA-204ENST00000394989 SIRPDQ9H106 197 aa11.04□□□□□ -0.64
SNCA-204ENST00000394989 WNK2Q9Y3S1 2297 aa11.03□□□□□ -0.64
SNCA-204ENST00000394989 CA1P00915 261 aaPredicted RBP11.03□□□□□ -0.64
SNCA-204ENST00000394989 HES1Q14469 280 aa11.03□□□□□ -0.64
SNCA-204ENST00000394989 C5orf64Q2M2E5 130 aa11.03□□□□□ -0.64
SNCA-204ENST00000394989 TIGITQ495A1 244 aa11.03□□□□□ -0.64
SNCA-204ENST00000394989 IGKV1-17P01599 117 aa11.03□□□□□ -0.64
SNCA-204ENST00000394989 YPEL3P61236 119 aaPredicted RBP11.03□□□□□ -0.64
SNCA-204ENST00000394989 GNG5P63218 68 aa11.03□□□□□ -0.64
SNCA-204ENST00000394989 Q56UQ5 140 aa11.03□□□□□ -0.64
SNCA-204ENST00000394989 KLF17Q5JT82 389 aaPredicted RBP11.03□□□□□ -0.64
SNCA-204ENST00000394989 BLNKQ8WV28 456 aa11.03□□□□□ -0.64
SNCA-204ENST00000394989 CSMD2Q7Z408 3487 aa11.03□□□□□ -0.64
SNCA-204ENST00000394989 SRIP30626 198 aa11.02□□□□□ -0.64
SNCA-204ENST00000394989 EFNA4P52798 201 aa11.02□□□□□ -0.64
SNCA-204ENST00000394989 NDPQ00604 133 aa11.02□□□□□ -0.64
SNCA-204ENST00000394989 PEX7O00628 323 aa11.02□□□□□ -0.65
SNCA-204ENST00000394989 RPEL1Q2QD12 228 aa11.02□□□□□ -0.65
SNCA-204ENST00000394989 Q8N6K4 173 aa11.02□□□□□ -0.65
SNCA-204ENST00000394989 OSTCQ9NRP0 149 aa11.02□□□□□ -0.65
SNCA-204ENST00000394989 ISLRO14498 428 aa11.02□□□□□ -0.65
SNCA-204ENST00000394989 GPX1P07203 203 aa11.02□□□□□ -0.65
SNCA-204ENST00000394989 SAPCD1Q5SSQ6 148 aa11.02□□□□□ -0.65
SNCA-204ENST00000394989 STXBP6Q8NFX7 210 aa11.02□□□□□ -0.65
SNCA-204ENST00000394989 UQCR10Q9UDW1 63 aa11.02□□□□□ -0.65
SNCA-204ENST00000394989 UTP20O75691 2785 aaKnown RBP11.01□□□□□ -0.65
SNCA-204ENST00000394989 H0Y8G0 127 aa11.01□□□□□ -0.65
SNCA-204ENST00000394989 C3orf79P0CE67 100 aa11.01□□□□□ -0.65
SNCA-204ENST00000394989 MGST1P10620 155 aaKnown RBP11.01□□□□□ -0.65
SNCA-204ENST00000394989 CRYBG3Q68DQ2 2970 aa11.01□□□□□ -0.65
SNCA-204ENST00000394989 AJUBAQ96IF1 538 aa11.01□□□□□ -0.65
SNCA-204ENST00000394989 BPESC1Q9GZL8 116 aa11.01□□□□□ -0.65
SNCA-204ENST00000394989 TRAV9-1A0A075B6T8 112 aa11.01□□□□□ -0.65
SNCA-204ENST00000394989 H3BTX0 84 aa11.01□□□□□ -0.65
SNCA-204ENST00000394989 NBEAP1P0C6P0 100 aa11.01□□□□□ -0.65
SNCA-204ENST00000394989 IGLC2P0DOY2 106 aa11.01□□□□□ -0.65
SNCA-204ENST00000394989 IGLC3P0DOY3 106 aa11.01□□□□□ -0.65
SNCA-204ENST00000394989 LYZP61626 148 aa11.01□□□□□ -0.65
SNCA-204ENST00000394989 IBA57Q5T440 356 aaKnown RBP11.01□□□□□ -0.65
SNCA-204ENST00000394989 OR4B1Q8NGF8 309 aa11.01□□□□□ -0.65
SNCA-204ENST00000394989 RASL11BQ9BPW5 248 aa11.01□□□□□ -0.65
SNCA-204ENST00000394989 CX3CL1P78423 397 aa11□□□□□ -0.65
SNCA-204ENST00000394989 IGHV2-70DA0A0C4DH43 119 aa11□□□□□ -0.65
SNCA-204ENST00000394989 LMO4P61968 165 aa11□□□□□ -0.65
SNCA-204ENST00000394989 EBI3Q14213 229 aa11□□□□□ -0.65
SNCA-204ENST00000394989 FAM168AQ92567 244 aa11□□□□□ -0.65
SNCA-204ENST00000394989 FANCD2OSQ96PS1 177 aa11□□□□□ -0.65
SNCA-204ENST00000394989 SLC25A39Q9BZJ4 359 aaPredicted RBP11□□□□□ -0.65
SNCA-204ENST00000394989 HIGD1AQ9Y241 93 aa11□□□□□ -0.65
SNCA-204ENST00000394989 S4R3C0 116 aa11□□□□□ -0.65
SNCA-204ENST00000394989 MAP1AP78559 2803 aaPredicted RBP11□□□□□ -0.65
SNCA-204ENST00000394989 CCDC144NLQ6NUI1 221 aa11□□□□□ -0.65
SNCA-204ENST00000394989 ZNF562Q6V9R5 426 aa11□□□□□ -0.65
SNCA-204ENST00000394989 ZNF738Q8NE65 137 aa11□□□□□ -0.65
SNCA-204ENST00000394989 BORCS7Q96B45 105 aa11□□□□□ -0.65
SNCA-204ENST00000394989 MCRIP2Q9BUT9 160 aaKnown RBP11□□□□□ -0.65
SNCA-204ENST00000394989 MRPL27Q9P0M9 148 aaKnown RBP11□□□□□ -0.65
SNCA-204ENST00000394989 EPDR1Q9UM22 224 aa11□□□□□ -0.65
SNCA-204ENST00000394989 PGPA6NDG6 321 aa10.99□□□□□ -0.65
SNCA-204ENST00000394989 NCBP2LA6PVI3 153 aaKnown RBP10.99□□□□□ -0.65
SNCA-204ENST00000394989 MINOS1Q5TGZ0 78 aa10.99□□□□□ -0.65
SNCA-204ENST00000394989 SGK494Q96LW2 274 aa10.99□□□□□ -0.65
SNCA-204ENST00000394989 MINOS1-NBL1R4GNA1 71 aa10.99□□□□□ -0.65
SNCA-204ENST00000394989 A0A1W2PS18 150 aa10.99□□□□□ -0.65
SNCA-204ENST00000394989 OVOL3O00110 214 aa10.99□□□□□ -0.65
SNCA-204ENST00000394989 UBE2V1Q13404 147 aa10.99□□□□□ -0.65
SNCA-204ENST00000394989 C7orf69Q9H7B7 122 aa10.99□□□□□ -0.65
SNCA-204ENST00000394989 ARPC1AQ92747 370 aa10.98□□□□□ -0.65
SNCA-204ENST00000394989 IGLV11-55A0A075B6I3 123 aa10.98□□□□□ -0.65
SNCA-204ENST00000394989 SMIM27A0A1W2PRY6 76 aa10.98□□□□□ -0.65
SNCA-204ENST00000394989 OOSP1A8MZH6 123 aa10.98□□□□□ -0.65
SNCA-204ENST00000394989 TOX4O94842 621 aa10.98□□□□□ -0.65
SNCA-204ENST00000394989 SLC25A5P05141 298 aaKnown RBP10.98□□□□□ -0.65
SNCA-204ENST00000394989 PMCHL1Q16048 86 aa10.98□□□□□ -0.65
SNCA-204ENST00000394989 Q8N976 141 aa10.98□□□□□ -0.65
SNCA-204ENST00000394989 KLF12Q9Y4X4 402 aa10.98□□□□□ -0.65
SNCA-204ENST00000394989 SPTAN1Q13813 2472 aaKnown RBP10.98□□□□□ -0.65
SNCA-204ENST00000394989 NPIPB5A8MRT5 1133 aa10.98□□□□□ -0.65
SNCA-204ENST00000394989 F8W735 103 aaPredicted RBP10.98□□□□□ -0.65
SNCA-204ENST00000394989 FAM120AOSQ5T036 256 aa10.98□□□□□ -0.65
SNCA-204ENST00000394989 EGR2P11161 476 aaPredicted RBP10.97□□□□□ -0.65
SNCA-204ENST00000394989 TSPOP30536 169 aa10.97□□□□□ -0.65
SNCA-204ENST00000394989 Q9H3A6 140 aa10.97□□□□□ -0.65
SNCA-204ENST00000394989 BCL6BQ8N143 479 aaPredicted RBP10.97□□□□□ -0.65
SNCA-204ENST00000394989 ZNF491Q8N8L2 437 aa10.97□□□□□ -0.65
SNCA-204ENST00000394989 ABCA2Q9BZC7 2435 aa10.97□□□□□ -0.65
SNCA-204ENST00000394989 IGHV4-39P01824 125 aa10.96□□□□□ -0.65
SNCA-204ENST00000394989 TMEM11P17152 192 aa10.96□□□□□ -0.65
SNCA-204ENST00000394989 UBE2E1P51965 193 aa10.96□□□□□ -0.65
SNCA-204ENST00000394989 TTC9CQ8N5M4 171 aa10.96□□□□□ -0.65
SNCA-204ENST00000394989 MBD6Q96DN6 1003 aa10.96□□□□□ -0.65
SNCA-204ENST00000394989 TMEM14CQ9P0S9 112 aa10.96□□□□□ -0.65
SNCA-204ENST00000394989 RPH3ALQ9UNE2 315 aa10.96□□□□□ -0.65
SNCA-204ENST00000394989 COX11Q9Y6N1 276 aa10.96□□□□□ -0.65
SNCA-204ENST00000394989 TCTAP57738 103 aa10.96□□□□□ -0.66
SNCA-204ENST00000394989 FAM231DQ6ZW35 169 aa10.96□□□□□ -0.66
SNCA-204ENST00000394989 Q8N9W7 124 aa10.96□□□□□ -0.66
SNCA-204ENST00000394989 IGHV7-81A0A0B4J1V7 117 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 234 ms