RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 RFNGQ9Y644 331 aa13□□□□□ -0.33
PDLIM7-205ENST00000393551 MEOX2P50222 304 aa12.99□□□□□ -0.33
PDLIM7-205ENST00000393551 EBLN2Q6P2I7 272 aa12.99□□□□□ -0.33
PDLIM7-205ENST00000393551 OR1B1Q8NGR6 318 aa12.99□□□□□ -0.33
PDLIM7-205ENST00000393551 CCDC32Q9BV29 185 aa12.99□□□□□ -0.33
PDLIM7-205ENST00000393551 RPRMQ9NS64 109 aa12.99□□□□□ -0.33
PDLIM7-205ENST00000393551 DOK5Q9P104 306 aa12.99□□□□□ -0.33
PDLIM7-205ENST00000393551 DNAH11Q96DT5 4516 aa12.98□□□□□ -0.33
PDLIM7-205ENST00000393551 TMEM189A5PLL7 270 aa12.98□□□□□ -0.33
PDLIM7-205ENST00000393551 H3BRN7 92 aa12.98□□□□□ -0.33
PDLIM7-205ENST00000393551 OR4E1P0C645 316 aa12.98□□□□□ -0.33
PDLIM7-205ENST00000393551 FAM222AQ5U5X8 452 aa12.98□□□□□ -0.33
PDLIM7-205ENST00000393551 SAMD13Q5VXD3 122 aa12.98□□□□□ -0.33
PDLIM7-205ENST00000393551 POM121L12Q8N7R1 296 aa12.98□□□□□ -0.33
PDLIM7-205ENST00000393551 NDUFAF3Q9BU61 184 aa12.98□□□□□ -0.33
PDLIM7-205ENST00000393551 PSENENQ9NZ42 101 aa12.98□□□□□ -0.33
PDLIM7-205ENST00000393551 LINC00854A0A1B0GVQ3 168 aa12.97□□□□□ -0.33
PDLIM7-205ENST00000393551 NAP1L6A6NFF2 107 aa12.97□□□□□ -0.33
PDLIM7-205ENST00000393551 PRM2P04554 102 aa12.97□□□□□ -0.33
PDLIM7-205ENST00000393551 ANXA7P20073 488 aaKnown RBP12.97□□□□□ -0.33
PDLIM7-205ENST00000393551 CYP2G1PQ6ZSU1 146 aa12.97□□□□□ -0.33
PDLIM7-205ENST00000393551 RNF182Q8N6D2 247 aa12.97□□□□□ -0.33
PDLIM7-205ENST00000393551 SMIM8Q96KF7 97 aa12.97□□□□□ -0.33
PDLIM7-205ENST00000393551 TMEM147Q9BVK8 224 aa12.97□□□□□ -0.33
PDLIM7-205ENST00000393551 SLC25A39Q9BZJ4 359 aaPredicted RBP12.97□□□□□ -0.33
PDLIM7-205ENST00000393551 CRXO43186 299 aaPredicted RBP12.96□□□□□ -0.33
PDLIM7-205ENST00000393551 SSSCA1O60232 199 aa12.96□□□□□ -0.33
PDLIM7-205ENST00000393551 CNN1P51911 297 aaKnown RBP12.96□□□□□ -0.33
PDLIM7-205ENST00000393551 TMEM14EPQ6UXP3 125 aa12.96□□□□□ -0.33
PDLIM7-205ENST00000393551 OR11H7Q8NGC8 314 aa12.96□□□□□ -0.33
PDLIM7-205ENST00000393551 NIPSNAP3BQ9BS92 247 aa12.96□□□□□ -0.33
PDLIM7-205ENST00000393551 SHANK2-AS3Q9BTD1 123 aa12.96□□□□□ -0.33
PDLIM7-205ENST00000393551 GOLT1BQ9Y3E0 138 aa12.96□□□□□ -0.33
PDLIM7-205ENST00000393551 YTHDF2Q9Y5A9 579 aaKnown RBP12.96□□□□□ -0.33
PDLIM7-205ENST00000393551 LOC102723971A0A1B0GUV8 181 aa12.95□□□□□ -0.34
PDLIM7-205ENST00000393551 SMCO3A2RU48 225 aa12.95□□□□□ -0.34
PDLIM7-205ENST00000393551 IL5P05113 134 aa12.95□□□□□ -0.34
PDLIM7-205ENST00000393551 P0DMU3 169 aa12.95□□□□□ -0.34
PDLIM7-205ENST00000393551 FAM231AP0DMU4 169 aa12.95□□□□□ -0.34
PDLIM7-205ENST00000393551 FAM231CP0DMU5 169 aa12.95□□□□□ -0.34
PDLIM7-205ENST00000393551 PLP1P60201 277 aa12.95□□□□□ -0.34
PDLIM7-205ENST00000393551 TRIQKQ629K1 86 aa12.95□□□□□ -0.34
PDLIM7-205ENST00000393551 PATE2Q6UY27 113 aa12.95□□□□□ -0.34
PDLIM7-205ENST00000393551 IGF2BP2-AS1Q96M15 143 aa12.95□□□□□ -0.34
PDLIM7-205ENST00000393551 GPR82Q96P67 336 aa12.95□□□□□ -0.34
PDLIM7-205ENST00000393551 UHRF2Q96PU4 802 aa12.95□□□□□ -0.34
PDLIM7-205ENST00000393551 NACAE9PAV3 2078 aa12.95□□□□□ -0.34
PDLIM7-205ENST00000393551 A0A1B0GVY2 172 aa12.94□□□□□ -0.34
PDLIM7-205ENST00000393551 M0R2Z0 102 aa12.94□□□□□ -0.34
PDLIM7-205ENST00000393551 HBE1P02100 147 aa12.94□□□□□ -0.34
PDLIM7-205ENST00000393551 METTL15P1P0C7V9 234 aa12.94□□□□□ -0.34
PDLIM7-205ENST00000393551 RRAS2P62070 204 aaPredicted RBP12.94□□□□□ -0.34
PDLIM7-205ENST00000393551 OXA1LQ15070 435 aa12.94□□□□□ -0.34
PDLIM7-205ENST00000393551 C7orf50Q9BRJ6 194 aaKnown RBP12.94□□□□□ -0.34
PDLIM7-205ENST00000393551 HIGD1AQ9Y241 93 aa12.94□□□□□ -0.34
PDLIM7-205ENST00000393551 MRPS12O15235 138 aaKnown RBP12.93□□□□□ -0.34
PDLIM7-205ENST00000393551 HYPMO75409 117 aa12.93□□□□□ -0.34
PDLIM7-205ENST00000393551 IFNA21P01568 189 aa12.93□□□□□ -0.34
PDLIM7-205ENST00000393551 LINC00869P0C866 280 aa12.93□□□□□ -0.34
PDLIM7-205ENST00000393551 PRB4P10163 310 aaPredicted RBP12.93□□□□□ -0.34
PDLIM7-205ENST00000393551 INPP1P49441 399 aa12.93□□□□□ -0.34
PDLIM7-205ENST00000393551 DLK1P80370 383 aa12.93□□□□□ -0.34
PDLIM7-205ENST00000393551 FGL1Q08830 312 aa12.93□□□□□ -0.34
PDLIM7-205ENST00000393551 ARL16Q0P5N6 197 aa12.93□□□□□ -0.34
PDLIM7-205ENST00000393551 SPINK13Q1W4C9 94 aa12.93□□□□□ -0.34
PDLIM7-205ENST00000393551 RRN3P1Q2M238 152 aa12.93□□□□□ -0.34
PDLIM7-205ENST00000393551 RCL1Q9Y2P8 373 aaKnown RBP12.93□□□□□ -0.34
PDLIM7-205ENST00000393551 M0R2N4 97 aa12.92□□□□□ -0.34
PDLIM7-205ENST00000393551 RTL8CO15255 209 aa12.92□□□□□ -0.34
PDLIM7-205ENST00000393551 UPK1BO75841 260 aa12.92□□□□□ -0.34
PDLIM7-205ENST00000393551 IAH1Q2TAA2 248 aaPredicted RBP12.92□□□□□ -0.34
PDLIM7-205ENST00000393551 C4orf46Q504U0 113 aa12.92□□□□□ -0.34
PDLIM7-205ENST00000393551 PCLOQ9Y6V0 5065 aa12.92□□□□□ -0.34
PDLIM7-205ENST00000393551 TEX48A0A1B0GUV7 120 aa12.91□□□□□ -0.34
PDLIM7-205ENST00000393551 ZNF705GA8MUZ8 300 aaPredicted RBP12.91□□□□□ -0.34
PDLIM7-205ENST00000393551 K7EPK0 472 aa12.91□□□□□ -0.34
PDLIM7-205ENST00000393551 PLA2G10O15496 165 aa12.91□□□□□ -0.34
PDLIM7-205ENST00000393551 OR5G3P0C626 314 aa12.91□□□□□ -0.34
PDLIM7-205ENST00000393551 IL7P13232 177 aa12.91□□□□□ -0.34
PDLIM7-205ENST00000393551 RPL7P18124 248 aaKnown RBP12.91□□□□□ -0.34
PDLIM7-205ENST00000393551 CXCL3P19876 107 aa12.91□□□□□ -0.34
PDLIM7-205ENST00000393551 RAP2BP61225 183 aa12.91□□□□□ -0.34
PDLIM7-205ENST00000393551 SELENOTP62341 195 aa12.91□□□□□ -0.34
PDLIM7-205ENST00000393551 SLC38A11Q08AI6 406 aa12.91□□□□□ -0.34
PDLIM7-205ENST00000393551 BAP18Q8IXM2 172 aa12.91□□□□□ -0.34
PDLIM7-205ENST00000393551 ZBTB8BQ8NAP8 495 aaPredicted RBP12.91□□□□□ -0.34
PDLIM7-205ENST00000393551 MITD1Q8WV92 249 aa12.91□□□□□ -0.34
PDLIM7-205ENST00000393551 FAM210BQ96KR6 192 aa12.91□□□□□ -0.34
PDLIM7-205ENST00000393551 NPVFQ9HCQ7 196 aa12.91□□□□□ -0.34
PDLIM7-205ENST00000393551 TRAV12-2A0A075B6T6 113 aa12.9□□□□□ -0.34
PDLIM7-205ENST00000393551 A0A087X0K7 114 aa12.9□□□□□ -0.34
PDLIM7-205ENST00000393551 PLAC8L1A1L4L8 177 aa12.9□□□□□ -0.34
PDLIM7-205ENST00000393551 C7orf66A4D0T2 115 aa12.9□□□□□ -0.34
PDLIM7-205ENST00000393551 FNDC10F2Z333 226 aa12.9□□□□□ -0.34
PDLIM7-205ENST00000393551 TSC22D2O75157 780 aa12.9□□□□□ -0.34
PDLIM7-205ENST00000393551 DUSP14O95147 198 aaKnown RBP12.9□□□□□ -0.34
PDLIM7-205ENST00000393551 SCGB1D2O95969 90 aa12.9□□□□□ -0.34
PDLIM7-205ENST00000393551 MBPP02686 304 aaPredicted RBP12.9□□□□□ -0.34
PDLIM7-205ENST00000393551 HTN3P15516 51 aa12.9□□□□□ -0.34
PDLIM7-205ENST00000393551 DEFA1P59665 94 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms