RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 OR8I2Q8N0Y5 310 aa6.68□□□□□ -1.34
TDP1-203ENST00000393454 ZFAND3Q9H8U3 227 aa6.68□□□□□ -1.34
TDP1-203ENST00000393454 SMCO4Q9NRQ5 59 aa6.68□□□□□ -1.34
TDP1-203ENST00000393454 ZNF586Q9NXT0 402 aa6.68□□□□□ -1.34
TDP1-203ENST00000393454 RPH3ALQ9UNE2 315 aa6.68□□□□□ -1.34
TDP1-203ENST00000393454 RNF24Q9Y225 148 aa6.68□□□□□ -1.34
TDP1-203ENST00000393454 TMA7Q9Y2S6 64 aaKnown RBP6.68□□□□□ -1.34
TDP1-203ENST00000393454 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.67□□□□□ -1.34
TDP1-203ENST00000393454 FAM181BA6NEQ2 426 aa6.67□□□□□ -1.34
TDP1-203ENST00000393454 HELTA6NFD8 242 aa6.67□□□□□ -1.34
TDP1-203ENST00000393454 TSPAN4O14817 238 aa6.67□□□□□ -1.34
TDP1-203ENST00000393454 PSMB8P28062 276 aa6.67□□□□□ -1.34
TDP1-203ENST00000393454 RPL35P42766 123 aaKnown RBP6.67□□□□□ -1.34
TDP1-203ENST00000393454 RPL23P62829 140 aaKnown RBP6.67□□□□□ -1.34
TDP1-203ENST00000393454 ZNF343Q6P1L6 599 aa6.67□□□□□ -1.34
TDP1-203ENST00000393454 C11orf52Q96A22 123 aa6.67□□□□□ -1.34
TDP1-203ENST00000393454 METTL26Q96S19 204 aa6.67□□□□□ -1.34
TDP1-203ENST00000393454 AURKAIP1Q9NWT8 199 aaPredicted RBP6.67□□□□□ -1.34
TDP1-203ENST00000393454 IGHV3OR16-13A0A075B7E8 117 aa6.67□□□□□ -1.34
TDP1-203ENST00000393454 IGHV3-49A0A0A0MS15 119 aa6.67□□□□□ -1.34
TDP1-203ENST00000393454 IGHV3-74A0A0B4J1X5 117 aa6.67□□□□□ -1.34
TDP1-203ENST00000393454 IGHV3-66A0A0C4DH42 116 aa6.67□□□□□ -1.34
TDP1-203ENST00000393454 TMEM89A2RUT3 159 aa6.67□□□□□ -1.34
TDP1-203ENST00000393454 PGPEP1LA6NFU8 196 aa6.67□□□□□ -1.34
TDP1-203ENST00000393454 B4DEV8 164 aa6.67□□□□□ -1.34
TDP1-203ENST00000393454 LY6G6DO95868 133 aa6.67□□□□□ -1.34
TDP1-203ENST00000393454 RPLP1P05386 114 aaKnown RBP6.67□□□□□ -1.34
TDP1-203ENST00000393454 RPL7P18124 248 aaKnown RBP6.67□□□□□ -1.34
TDP1-203ENST00000393454 GNG5P63218 68 aa6.67□□□□□ -1.34
TDP1-203ENST00000393454 ZNF414Q96IQ9 312 aa6.67□□□□□ -1.34
TDP1-203ENST00000393454 C17orf77Q96MU5 243 aa6.67□□□□□ -1.34
TDP1-203ENST00000393454 Q9H3A6 140 aa6.67□□□□□ -1.34
TDP1-203ENST00000393454 FLNBO75369 2602 aaKnown RBP6.66□□□□□ -1.34
TDP1-203ENST00000393454 ZNF320A2RRD8 509 aa6.66□□□□□ -1.34
TDP1-203ENST00000393454 IGLC2P0DOY2 106 aa6.66□□□□□ -1.34
TDP1-203ENST00000393454 SRD5A1P18405 259 aa6.66□□□□□ -1.34
TDP1-203ENST00000393454 ATF4P18848 351 aaPredicted RBP6.66□□□□□ -1.34
TDP1-203ENST00000393454 ESM1Q9NQ30 184 aa6.66□□□□□ -1.34
TDP1-203ENST00000393454 PEF1Q9UBV8 284 aaKnown RBP6.66□□□□□ -1.34
TDP1-203ENST00000393454 SETXQ7Z333 2677 aaKnown RBP6.66□□□□□ -1.34
TDP1-203ENST00000393454 TRBV19A0A075B6N1 114 aa6.65□□□□□ -1.34
TDP1-203ENST00000393454 CLPSL1A2RUU4 121 aa6.65□□□□□ -1.34
TDP1-203ENST00000393454 PEX7O00628 323 aa6.65□□□□□ -1.34
TDP1-203ENST00000393454 MRPS12O15235 138 aaKnown RBP6.65□□□□□ -1.34
TDP1-203ENST00000393454 GGCTO75223 188 aaKnown RBP6.65□□□□□ -1.34
TDP1-203ENST00000393454 MT-ND4LP03901 98 aa6.65□□□□□ -1.34
TDP1-203ENST00000393454 CRYBA1P05813 215 aa6.65□□□□□ -1.34
TDP1-203ENST00000393454 ELANEP08246 267 aa6.65□□□□□ -1.34
TDP1-203ENST00000393454 MYCNOSP40205 109 aa6.65□□□□□ -1.34
TDP1-203ENST00000393454 GNG4P50150 75 aa6.65□□□□□ -1.34
TDP1-203ENST00000393454 CNN1P51911 297 aaKnown RBP6.65□□□□□ -1.34
TDP1-203ENST00000393454 FOXE3Q13461 319 aa6.65□□□□□ -1.34
TDP1-203ENST00000393454 RNF212Q495C1 297 aa6.65□□□□□ -1.34
TDP1-203ENST00000393454 Q71RC1 249 aaPredicted RBP6.65□□□□□ -1.34
TDP1-203ENST00000393454 Q8N2B8 174 aa6.65□□□□□ -1.34
TDP1-203ENST00000393454 EXOC3-AS1Q8N2X6 119 aa6.65□□□□□ -1.34
TDP1-203ENST00000393454 CMTM2Q8TAZ6 248 aa6.65□□□□□ -1.34
TDP1-203ENST00000393454 C2CD4CQ8TF44 421 aa6.65□□□□□ -1.34
TDP1-203ENST00000393454 ISOC2Q96AB3 205 aa6.65□□□□□ -1.34
TDP1-203ENST00000393454 OTORQ9NRC9 128 aa6.65□□□□□ -1.34
TDP1-203ENST00000393454 EPDR1Q9UM22 224 aa6.65□□□□□ -1.34
TDP1-203ENST00000393454 MTORP42345 2549 aa6.65□□□□□ -1.34
TDP1-203ENST00000393454 HIVEP2P31629 2446 aa6.65□□□□□ -1.35
TDP1-203ENST00000393454 TRBV20OR9-2A0A075B6H5 130 aa6.65□□□□□ -1.35
TDP1-203ENST00000393454 A0A087WWC5 75 aa6.65□□□□□ -1.35
TDP1-203ENST00000393454 TRAV34A0A0B4J273 112 aa6.65□□□□□ -1.35
TDP1-203ENST00000393454 ZNF785A8K8V0 405 aa6.65□□□□□ -1.35
TDP1-203ENST00000393454 NDUFA4O00483 81 aa6.65□□□□□ -1.35
TDP1-203ENST00000393454 APOHP02749 345 aaPredicted RBP6.65□□□□□ -1.35
TDP1-203ENST00000393454 UBE2G1P62253 170 aa6.65□□□□□ -1.35
TDP1-203ENST00000393454 CENPWQ5EE01 88 aa6.65□□□□□ -1.35
TDP1-203ENST00000393454 FAM209BQ5JX69 171 aa6.65□□□□□ -1.35
TDP1-203ENST00000393454 LINC01551Q86U37 167 aa6.65□□□□□ -1.35
TDP1-203ENST00000393454 C5orf17Q8NAS9 161 aa6.65□□□□□ -1.35
TDP1-203ENST00000393454 OCC1Q8TAD7 63 aa6.65□□□□□ -1.35
TDP1-203ENST00000393454 ZNF418Q8TF45 676 aaPredicted RBP6.65□□□□□ -1.35
TDP1-203ENST00000393454 HIST1H2BAQ96A08 127 aa6.65□□□□□ -1.35
TDP1-203ENST00000393454 LINC00479Q96M42 142 aa6.65□□□□□ -1.35
TDP1-203ENST00000393454 SERTAD4Q9NUC0 356 aa6.65□□□□□ -1.35
TDP1-203ENST00000393454 TMEM160Q9NX00 188 aa6.65□□□□□ -1.35
TDP1-203ENST00000393454 C9JCJ5 164 aa6.64□□□□□ -1.35
TDP1-203ENST00000393454 HAX1O00165 279 aa6.64□□□□□ -1.35
TDP1-203ENST00000393454 SLC17A3O00476 420 aa6.64□□□□□ -1.35
TDP1-203ENST00000393454 BUB3O43684 328 aa6.64□□□□□ -1.35
TDP1-203ENST00000393454 GALR1P47211 349 aa6.64□□□□□ -1.35
TDP1-203ENST00000393454 UNQ9165/PRO28630Q6UXU0 137 aa6.64□□□□□ -1.35
TDP1-203ENST00000393454 Q6ZSV7 163 aa6.64□□□□□ -1.35
TDP1-203ENST00000393454 SGK494Q96LW2 274 aa6.64□□□□□ -1.35
TDP1-203ENST00000393454 TCEAL7Q9BRU2 100 aa6.64□□□□□ -1.35
TDP1-203ENST00000393454 AAMDCQ9H7C9 122 aa6.64□□□□□ -1.35
TDP1-203ENST00000393454 CDC42EP3Q9UKI2 254 aa6.64□□□□□ -1.35
TDP1-203ENST00000393454 PRELID1Q9Y255 219 aa6.64□□□□□ -1.35
TDP1-203ENST00000393454 OTOGQ6ZRI0 2925 aa6.64□□□□□ -1.35
TDP1-203ENST00000393454 PSG9Q00887 426 aa6.64□□□□□ -1.35
TDP1-203ENST00000393454 FAM106AQ4KMX7 169 aa6.64□□□□□ -1.35
TDP1-203ENST00000393454 LYPD1Q8N2G4 141 aa6.64□□□□□ -1.35
TDP1-203ENST00000393454 KLHDC1Q8N7A1 406 aa6.64□□□□□ -1.35
TDP1-203ENST00000393454 GPR82Q96P67 336 aa6.64□□□□□ -1.35
TDP1-203ENST00000393454 ATG101Q9BSB4 218 aa6.64□□□□□ -1.35
TDP1-203ENST00000393454 CTDSP1Q9GZU7 261 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms