RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 IGKV3-20P01619 116 aa5.61□□□□□ -1.51
HMGB3P1-201ENST00000393368 GIG44P09565 113 aaPredicted RBP5.61□□□□□ -1.51
HMGB3P1-201ENST00000393368 NUP62P37198 522 aaPredicted RBP5.61□□□□□ -1.51
HMGB3P1-201ENST00000393368 SULT1A1P50225 295 aa5.61□□□□□ -1.51
HMGB3P1-201ENST00000393368 SNRPD3P62318 126 aaKnown RBP5.61□□□□□ -1.51
HMGB3P1-201ENST00000393368 NHLH2Q02577 135 aa5.61□□□□□ -1.51
HMGB3P1-201ENST00000393368 BAXQ07812 192 aa5.61□□□□□ -1.51
HMGB3P1-201ENST00000393368 FGL1Q08830 312 aa5.61□□□□□ -1.51
HMGB3P1-201ENST00000393368 C1orf194Q5T5A4 169 aa5.61□□□□□ -1.51
HMGB3P1-201ENST00000393368 MORN5Q5VZ52 161 aa5.61□□□□□ -1.51
HMGB3P1-201ENST00000393368 MIC13Q5XKP0 118 aa5.61□□□□□ -1.51
HMGB3P1-201ENST00000393368 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.61□□□□□ -1.51
HMGB3P1-201ENST00000393368 Q6ZWC4 215 aa5.61□□□□□ -1.51
HMGB3P1-201ENST00000393368 ZNF546Q86UE3 836 aa5.61□□□□□ -1.51
HMGB3P1-201ENST00000393368 STX12Q86Y82 276 aa5.61□□□□□ -1.51
HMGB3P1-201ENST00000393368 RNF183Q96D59 192 aa5.61□□□□□ -1.51
HMGB3P1-201ENST00000393368 SHANK2-AS3Q9BTD1 123 aa5.61□□□□□ -1.51
HMGB3P1-201ENST00000393368 GGACTQ9BVM4 153 aa5.61□□□□□ -1.51
HMGB3P1-201ENST00000393368 NMES1Q9C002 83 aa5.61□□□□□ -1.51
HMGB3P1-201ENST00000393368 ARV1Q9H2C2 271 aa5.61□□□□□ -1.51
HMGB3P1-201ENST00000393368 UQCC1Q9NVA1 299 aa5.61□□□□□ -1.51
HMGB3P1-201ENST00000393368 FBXL17Q9UF56 701 aa5.61□□□□□ -1.51
HMGB3P1-201ENST00000393368 PFDN2Q9UHV9 154 aa5.61□□□□□ -1.51
HMGB3P1-201ENST00000393368 SLC45A2Q9UMX9 530 aa5.61□□□□□ -1.51
HMGB3P1-201ENST00000393368 HYDINQ4G0P3 5121 aa5.61□□□□□ -1.51
HMGB3P1-201ENST00000393368 ALMS1Q8TCU4 4167 aa5.6□□□□□ -1.51
HMGB3P1-201ENST00000393368 TRAV8-2A0A0B4J237 113 aa5.6□□□□□ -1.51
HMGB3P1-201ENST00000393368 C3orf84H3BNL1 204 aa5.6□□□□□ -1.51
HMGB3P1-201ENST00000393368 H3BTX0 84 aa5.6□□□□□ -1.51
HMGB3P1-201ENST00000393368 UBE2CO00762 179 aa5.6□□□□□ -1.51
HMGB3P1-201ENST00000393368 DEFB4AO15263 64 aa5.6□□□□□ -1.51
HMGB3P1-201ENST00000393368 COX7A2P2O60397 106 aa5.6□□□□□ -1.51
HMGB3P1-201ENST00000393368 CXCL3P19876 107 aa5.6□□□□□ -1.51
HMGB3P1-201ENST00000393368 FGF7P21781 194 aa5.6□□□□□ -1.51
HMGB3P1-201ENST00000393368 HLA-DMBP28068 263 aa5.6□□□□□ -1.51
HMGB3P1-201ENST00000393368 GALR1P47211 349 aa5.6□□□□□ -1.51
HMGB3P1-201ENST00000393368 CAMLGP49069 296 aa5.6□□□□□ -1.51
HMGB3P1-201ENST00000393368 FXYD7P58549 80 aa5.6□□□□□ -1.51
HMGB3P1-201ENST00000393368 RAP2BP61225 183 aa5.6□□□□□ -1.51
HMGB3P1-201ENST00000393368 SELENOTP62341 195 aa5.6□□□□□ -1.51
HMGB3P1-201ENST00000393368 PMS2P11Q13670 270 aa5.6□□□□□ -1.51
HMGB3P1-201ENST00000393368 CLINT1Q14677 625 aa5.6□□□□□ -1.51
HMGB3P1-201ENST00000393368 VWC2Q2TAL6 325 aa5.6□□□□□ -1.51
HMGB3P1-201ENST00000393368 LINC00305Q7Z4B0 112 aa5.6□□□□□ -1.51
HMGB3P1-201ENST00000393368 RNF182Q8N6D2 247 aa5.6□□□□□ -1.51
HMGB3P1-201ENST00000393368 OR11H2Q8NH07 326 aa5.6□□□□□ -1.51
HMGB3P1-201ENST00000393368 THAP6Q8TBB0 222 aa5.6□□□□□ -1.51
HMGB3P1-201ENST00000393368 PPP1R1CQ8WVI7 109 aa5.6□□□□□ -1.51
HMGB3P1-201ENST00000393368 TMEM37Q8WXS4 190 aa5.6□□□□□ -1.51
HMGB3P1-201ENST00000393368 C16orf92Q96LL3 132 aa5.6□□□□□ -1.51
HMGB3P1-201ENST00000393368 WDR83OSQ9Y284 106 aa5.6□□□□□ -1.51
HMGB3P1-201ENST00000393368 TP53TG1Q9Y2A0 90 aa5.6□□□□□ -1.51
HMGB3P1-201ENST00000393368 DNAH1Q9P2D7 4330 aa5.6□□□□□ -1.51
HMGB3P1-201ENST00000393368 TRAV5A0A0B4J249 113 aa5.59□□□□□ -1.51
HMGB3P1-201ENST00000393368 E5RGE8 158 aa5.59□□□□□ -1.51
HMGB3P1-201ENST00000393368 H3BMM0 161 aa5.59□□□□□ -1.51
HMGB3P1-201ENST00000393368 PTTG1O95997 202 aa5.59□□□□□ -1.51
HMGB3P1-201ENST00000393368 ZNF705DP0CH99 300 aaPredicted RBP5.59□□□□□ -1.51
HMGB3P1-201ENST00000393368 ZNF705BP0CI00 300 aaPredicted RBP5.59□□□□□ -1.51
HMGB3P1-201ENST00000393368 ATF4P18848 351 aaPredicted RBP5.59□□□□□ -1.51
HMGB3P1-201ENST00000393368 S100A11P31949 105 aa5.59□□□□□ -1.51
HMGB3P1-201ENST00000393368 PSMB3P49720 205 aa5.59□□□□□ -1.51
HMGB3P1-201ENST00000393368 PLP1P60201 277 aa5.59□□□□□ -1.51
HMGB3P1-201ENST00000393368 OPCMLQ14982 345 aa5.59□□□□□ -1.51
HMGB3P1-201ENST00000393368 FCN2Q15485 313 aa5.59□□□□□ -1.51
HMGB3P1-201ENST00000393368 GCSAMLQ5JQS6 135 aa5.59□□□□□ -1.51
HMGB3P1-201ENST00000393368 OR5C1Q8NGR4 320 aa5.59□□□□□ -1.51
HMGB3P1-201ENST00000393368 RARRES2Q99969 163 aa5.59□□□□□ -1.51
HMGB3P1-201ENST00000393368 RNF126Q9BV68 326 aa5.59□□□□□ -1.51
HMGB3P1-201ENST00000393368 SMIM3Q9BZL3 60 aa5.59□□□□□ -1.51
HMGB3P1-201ENST00000393368 SAV1Q9H4B6 383 aaPredicted RBP5.59□□□□□ -1.51
HMGB3P1-201ENST00000393368 MBD2Q9UBB5 411 aa5.59□□□□□ -1.51
HMGB3P1-201ENST00000393368 ISLRO14498 428 aa5.58□□□□□ -1.52
HMGB3P1-201ENST00000393368 MRPS12O15235 138 aaKnown RBP5.58□□□□□ -1.52
HMGB3P1-201ENST00000393368 MPC2O95563 127 aa5.58□□□□□ -1.52
HMGB3P1-201ENST00000393368 RLN2P04090 185 aa5.58□□□□□ -1.52
HMGB3P1-201ENST00000393368 SPP1P10451 314 aa5.58□□□□□ -1.52
HMGB3P1-201ENST00000393368 HLA-DRB4P13762 266 aa5.58□□□□□ -1.52
HMGB3P1-201ENST00000393368 ID1P41134 155 aa5.58□□□□□ -1.52
HMGB3P1-201ENST00000393368 B2MP61769 119 aa5.58□□□□□ -1.52
HMGB3P1-201ENST00000393368 HBG1P69891 147 aa5.58□□□□□ -1.52
HMGB3P1-201ENST00000393368 HBG2P69892 147 aa5.58□□□□□ -1.52
HMGB3P1-201ENST00000393368 C10orf113Q5VZT2 155 aa5.58□□□□□ -1.52
HMGB3P1-201ENST00000393368 MORN3Q6PF18 240 aaPredicted RBP5.58□□□□□ -1.52
HMGB3P1-201ENST00000393368 FOXI2Q6ZQN5 318 aa5.58□□□□□ -1.52
HMGB3P1-201ENST00000393368 OR11H7Q8NGC8 314 aa5.58□□□□□ -1.52
HMGB3P1-201ENST00000393368 OR4B1Q8NGF8 309 aa5.58□□□□□ -1.52
HMGB3P1-201ENST00000393368 IL17DQ8TAD2 202 aa5.58□□□□□ -1.52
HMGB3P1-201ENST00000393368 NPCDR1Q9BY65 106 aa5.58□□□□□ -1.52
HMGB3P1-201ENST00000393368 SLC35B3Q9H1N7 401 aa5.58□□□□□ -1.52
HMGB3P1-201ENST00000393368 SEPSECSQ9HD40 501 aaKnown RBP5.58□□□□□ -1.52
HMGB3P1-201ENST00000393368 SLC39A9Q9NUM3 307 aa5.58□□□□□ -1.52
HMGB3P1-201ENST00000393368 XCL2Q9UBD3 114 aa5.58□□□□□ -1.52
HMGB3P1-201ENST00000393368 PXMP4Q9Y6I8 212 aa5.58□□□□□ -1.52
HMGB3P1-201ENST00000393368 HLA-DRB4X5D2U9 266 aa5.58□□□□□ -1.52
HMGB3P1-201ENST00000393368 CXorf65A6NEN9 183 aa5.57□□□□□ -1.52
HMGB3P1-201ENST00000393368 SLC17A3O00476 420 aa5.57□□□□□ -1.52
HMGB3P1-201ENST00000393368 RPL7P18124 248 aaKnown RBP5.57□□□□□ -1.52
HMGB3P1-201ENST00000393368 MEOX2P50222 304 aa5.57□□□□□ -1.52
HMGB3P1-201ENST00000393368 CYCSP99999 105 aaKnown RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms