RNA–Protein interactions for RNA: ENST00000392496.3

SPHK1-202, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-202ENST00000392496 C5orf17Q8NAS9 161 aa16.56■□□□□ 0.24
SPHK1-202ENST00000392496 SFRP2Q96HF1 295 aa16.56■□□□□ 0.24
SPHK1-202ENST00000392496 IGF2BP2-AS1Q96M15 143 aa16.56■□□□□ 0.24
SPHK1-202ENST00000392496 OR5B12Q96R08 314 aa16.56■□□□□ 0.24
SPHK1-202ENST00000392496 OTORQ9NRC9 128 aa16.56■□□□□ 0.24
SPHK1-202ENST00000392496 CSMD1Q96PZ7 3565 aa16.56■□□□□ 0.24
SPHK1-202ENST00000392496 CXCL1P09341 107 aa16.56■□□□□ 0.24
SPHK1-202ENST00000392496 TOMM20LQ6UXN7 152 aa16.56■□□□□ 0.24
SPHK1-202ENST00000392496 USMG5Q96IX5 58 aa16.56■□□□□ 0.24
SPHK1-202ENST00000392496 ZFAND3Q9H8U3 227 aa16.56■□□□□ 0.24
SPHK1-202ENST00000392496 VPREB3Q9UKI3 123 aa16.56■□□□□ 0.24
SPHK1-202ENST00000392496 MYO9AB2RTY4 2548 aa16.55■□□□□ 0.24
SPHK1-202ENST00000392496 TRBV19A0A075B6N1 114 aa16.55■□□□□ 0.24
SPHK1-202ENST00000392496 K7EN84 100 aa16.55■□□□□ 0.24
SPHK1-202ENST00000392496 PFN1P07737 140 aaKnown RBP16.55■□□□□ 0.24
SPHK1-202ENST00000392496 GALR1P47211 349 aa16.55■□□□□ 0.24
SPHK1-202ENST00000392496 TPPP2P59282 170 aa16.55■□□□□ 0.24
SPHK1-202ENST00000392496 FLI1Q01543 452 aaPredicted RBP16.55■□□□□ 0.24
SPHK1-202ENST00000392496 TEX38Q6PEX7 206 aa16.55■□□□□ 0.24
SPHK1-202ENST00000392496 TEX29Q8N6K0 151 aa16.55■□□□□ 0.24
SPHK1-202ENST00000392496 TRBV24-1A0A075B6N3 115 aa16.54■□□□□ 0.24
SPHK1-202ENST00000392496 TGIF2-C20orf24A0A0A6YYL0 155 aa16.54■□□□□ 0.24
SPHK1-202ENST00000392496 IGLV1-40P01703 118 aa16.54■□□□□ 0.24
SPHK1-202ENST00000392496 S100PP25815 95 aa16.54■□□□□ 0.24
SPHK1-202ENST00000392496 CFHR3Q02985 330 aa16.54■□□□□ 0.24
SPHK1-202ENST00000392496 RELQ04864 619 aaPredicted RBP16.54■□□□□ 0.24
SPHK1-202ENST00000392496 LYPD1Q8N2G4 141 aa16.54■□□□□ 0.24
SPHK1-202ENST00000392496 GNB4Q9HAV0 340 aa16.54■□□□□ 0.24
SPHK1-202ENST00000392496 H3BTX0 84 aa16.54■□□□□ 0.24
SPHK1-202ENST00000392496 HNF1AP20823 631 aa16.54■□□□□ 0.24
SPHK1-202ENST00000392496 SRP14P37108 136 aaKnown RBP16.54■□□□□ 0.24
SPHK1-202ENST00000392496 CIARTQ8N365 385 aaPredicted RBP16.54■□□□□ 0.24
SPHK1-202ENST00000392496 CREBBPQ92793 2442 aa16.53■□□□□ 0.24
SPHK1-202ENST00000392496 C1orf196B1AJZ1 125 aa16.53■□□□□ 0.24
SPHK1-202ENST00000392496 RPL7P18124 248 aaKnown RBP16.53■□□□□ 0.24
SPHK1-202ENST00000392496 GNG5P63218 68 aa16.53■□□□□ 0.24
SPHK1-202ENST00000392496 OR10G8Q8NGN5 311 aa16.53■□□□□ 0.24
SPHK1-202ENST00000392496 IMMP2LQ96T52 175 aa16.53■□□□□ 0.24
SPHK1-202ENST00000392496 ATG101Q9BSB4 218 aa16.53■□□□□ 0.24
SPHK1-202ENST00000392496 IGLV2-8P01709 118 aa16.52■□□□□ 0.24
SPHK1-202ENST00000392496 S100A9P06702 114 aaKnown RBP16.52■□□□□ 0.24
SPHK1-202ENST00000392496 RAB9AP51151 201 aa16.52■□□□□ 0.24
SPHK1-202ENST00000392496 RAB5BP61020 215 aa16.52■□□□□ 0.24
SPHK1-202ENST00000392496 PDE6HQ13956 83 aa16.52■□□□□ 0.24
SPHK1-202ENST00000392496 TMEM183BQ1AE95 376 aa16.52■□□□□ 0.24
SPHK1-202ENST00000392496 C1QL4Q86Z23 238 aa16.52■□□□□ 0.24
SPHK1-202ENST00000392496 FAM210BQ96KR6 192 aa16.52■□□□□ 0.24
SPHK1-202ENST00000392496 LINC00479Q96M42 142 aa16.52■□□□□ 0.24
SPHK1-202ENST00000392496 PYGO2Q9BRQ0 406 aa16.52■□□□□ 0.24
SPHK1-202ENST00000392496 KLF12Q9Y4X4 402 aa16.52■□□□□ 0.24
SPHK1-202ENST00000392496 IGHV3-35A0A0C4DH35 117 aa16.51■□□□□ 0.23
SPHK1-202ENST00000392496 GCGP01275 180 aa16.51■□□□□ 0.23
SPHK1-202ENST00000392496 TCRAP04437 139 aa16.51■□□□□ 0.23
SPHK1-202ENST00000392496 PF4V1P10720 104 aa16.51■□□□□ 0.23
SPHK1-202ENST00000392496 RPS10P46783 165 aaKnown RBP16.51■□□□□ 0.23
SPHK1-202ENST00000392496 A0A0G2JLM5 398 aa16.5■□□□□ 0.23
SPHK1-202ENST00000392496 SMAD7O15105 426 aaKnown RBP16.5■□□□□ 0.23
SPHK1-202ENST00000392496 UBE2G1P62253 170 aa16.5■□□□□ 0.23
SPHK1-202ENST00000392496 KCNIP4Q6PIL6 250 aa16.5■□□□□ 0.23
SPHK1-202ENST00000392496 SIGLEC15Q6ZMC9 328 aa16.5■□□□□ 0.23
SPHK1-202ENST00000392496 C17orf77Q96MU5 243 aa16.5■□□□□ 0.23
SPHK1-202ENST00000392496 ZFHX3Q15911 3703 aa16.5■□□□□ 0.23
SPHK1-202ENST00000392496 ISLRO14498 428 aa16.49■□□□□ 0.23
SPHK1-202ENST00000392496 BAGE2Q86Y30 109 aa16.49■□□□□ 0.23
SPHK1-202ENST00000392496 CMTM2Q8TAZ6 248 aa16.49■□□□□ 0.23
SPHK1-202ENST00000392496 KLK15Q9H2R5 256 aa16.49■□□□□ 0.23
SPHK1-202ENST00000392496 ITPR3Q14573 2671 aa16.49■□□□□ 0.23
SPHK1-202ENST00000392496 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.49■□□□□ 0.23
SPHK1-202ENST00000392496 TRAV34A0A0B4J273 112 aa16.49■□□□□ 0.23
SPHK1-202ENST00000392496 PPP5D1E7EU14 171 aa16.49■□□□□ 0.23
SPHK1-202ENST00000392496 HOXA3O43365 443 aaPredicted RBP16.49■□□□□ 0.23
SPHK1-202ENST00000392496 GGCTO75223 188 aaKnown RBP16.49■□□□□ 0.23
SPHK1-202ENST00000392496 ARL3P36405 182 aa16.49■□□□□ 0.23
SPHK1-202ENST00000392496 OR5I1Q13606 314 aa16.49■□□□□ 0.23
SPHK1-202ENST00000392496 OR8I2Q8N0Y5 310 aa16.49■□□□□ 0.23
SPHK1-202ENST00000392496 EXOC3-AS1Q8N2X6 119 aa16.49■□□□□ 0.23
SPHK1-202ENST00000392496 SMIM12Q96EX1 92 aa16.49■□□□□ 0.23
SPHK1-202ENST00000392496 FMC1Q96HJ9 113 aa16.49■□□□□ 0.23
SPHK1-202ENST00000392496 PRSS22Q9GZN4 317 aa16.49■□□□□ 0.23
SPHK1-202ENST00000392496 OSTCQ9NRP0 149 aa16.49■□□□□ 0.23
SPHK1-202ENST00000392496 ZANQ9Y493 2812 aa16.49■□□□□ 0.23
SPHK1-202ENST00000392496 TMEM89A2RUT3 159 aa16.48■□□□□ 0.23
SPHK1-202ENST00000392496 CLPSL1A2RUU4 121 aa16.48■□□□□ 0.23
SPHK1-202ENST00000392496 ERVFC1-1P60608 527 aa16.48■□□□□ 0.23
SPHK1-202ENST00000392496 FOXL1Q12952 345 aa16.48■□□□□ 0.23
SPHK1-202ENST00000392496 RPH3ALQ9UNE2 315 aa16.48■□□□□ 0.23
SPHK1-202ENST00000392496 BUB3O43684 328 aa16.47■□□□□ 0.23
SPHK1-202ENST00000392496 IGHG4P01861 327 aa16.47■□□□□ 0.23
SPHK1-202ENST00000392496 RPL15P61313 204 aaKnown RBP16.47■□□□□ 0.23
SPHK1-202ENST00000392496 TMEM95Q3KNT9 176 aa16.47■□□□□ 0.23
SPHK1-202ENST00000392496 GPR82Q96P67 336 aa16.47■□□□□ 0.23
SPHK1-202ENST00000392496 IGHV3OR16-8A0A075B7F1 116 aa16.46■□□□□ 0.23
SPHK1-202ENST00000392496 SLC17A3O00476 420 aa16.46■□□□□ 0.23
SPHK1-202ENST00000392496 PSG9Q00887 426 aa16.46■□□□□ 0.23
SPHK1-202ENST00000392496 ZFP82Q8N141 532 aa16.46■□□□□ 0.23
SPHK1-202ENST00000392496 BTF3L4Q96K17 158 aa16.46■□□□□ 0.23
SPHK1-202ENST00000392496 METTL26Q96S19 204 aa16.46■□□□□ 0.23
SPHK1-202ENST00000392496 NPFFR1Q9GZQ6 430 aa16.46■□□□□ 0.23
SPHK1-202ENST00000392496 TEX15Q9BXT5 2789 aa16.46■□□□□ 0.23
SPHK1-202ENST00000392496 ZNF253O75346 499 aa16.46■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms