RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 FABP2P12104 132 aa15.27■□□□□ 0.04
CCDC50-202ENST00000392456 HBG1P69891 147 aa15.27■□□□□ 0.04
CCDC50-202ENST00000392456 HBG2P69892 147 aa15.27■□□□□ 0.04
CCDC50-202ENST00000392456 ZNF562Q6V9R5 426 aa15.27■□□□□ 0.04
CCDC50-202ENST00000392456 BPIFA4PQ86YQ2 179 aa15.27■□□□□ 0.04
CCDC50-202ENST00000392456 NDFIP1Q9BT67 221 aa15.27■□□□□ 0.04
CCDC50-202ENST00000392456 PTPN13Q12923 2485 aa15.27■□□□□ 0.04
CCDC50-202ENST00000392456 FBLL1A6NHQ2 334 aaKnown RBP15.27■□□□□ 0.03
CCDC50-202ENST00000392456 K7EN84 100 aa15.27■□□□□ 0.03
CCDC50-202ENST00000392456 BRWD1-AS2P59051 145 aa15.27■□□□□ 0.03
CCDC50-202ENST00000392456 EIF4EBP1Q13541 118 aaPredicted RBP15.27■□□□□ 0.03
CCDC50-202ENST00000392456 hADV38S2A0JD32 116 aa15.26■□□□□ 0.03
CCDC50-202ENST00000392456 H0Y980 276 aa15.26■□□□□ 0.03
CCDC50-202ENST00000392456 IGKV1-39P01597 117 aa15.26■□□□□ 0.03
CCDC50-202ENST00000392456 IGKV1D-39P04432 117 aa15.26■□□□□ 0.03
CCDC50-202ENST00000392456 IZUMO4Q1ZYL8 232 aa15.26■□□□□ 0.03
CCDC50-202ENST00000392456 CT45A1Q5HYN5 189 aa15.26■□□□□ 0.03
CCDC50-202ENST00000392456 CT45A3Q8NHU0 189 aa15.26■□□□□ 0.03
CCDC50-202ENST00000392456 LINC00312Q9Y6C7 94 aa15.26■□□□□ 0.03
CCDC50-202ENST00000392456 NBPF19A0A087WUL8 3843 aa15.26■□□□□ 0.03
CCDC50-202ENST00000392456 UBE2L5PA0A1B0GUS4 154 aa15.26■□□□□ 0.03
CCDC50-202ENST00000392456 CA1P00915 261 aaPredicted RBP15.26■□□□□ 0.03
CCDC50-202ENST00000392456 COX8AP10176 69 aa15.26■□□□□ 0.03
CCDC50-202ENST00000392456 STPG3Q8N7X2 389 aa15.26■□□□□ 0.03
CCDC50-202ENST00000392456 V9GYV3 84 aa15.26■□□□□ 0.03
CCDC50-202ENST00000392456 A1L4Q6 167 aa15.25■□□□□ 0.03
CCDC50-202ENST00000392456 HELTA6NFD8 242 aa15.25■□□□□ 0.03
CCDC50-202ENST00000392456 LINC00473A8K010 186 aa15.25■□□□□ 0.03
CCDC50-202ENST00000392456 RPL39P5Q59GN2 51 aa15.25■□□□□ 0.03
CCDC50-202ENST00000392456 LINC00574Q9H8X3 128 aa15.25■□□□□ 0.03
CCDC50-202ENST00000392456 SYS1-DBNDD2H3BUS1 97 aa15.25■□□□□ 0.03
CCDC50-202ENST00000392456 SPINK4O60575 86 aa15.25■□□□□ 0.03
CCDC50-202ENST00000392456 AMY1AP04745 511 aa15.25■□□□□ 0.03
CCDC50-202ENST00000392456 DLX1P56177 255 aa15.25■□□□□ 0.03
CCDC50-202ENST00000392456 FAM120AOSQ5T036 256 aa15.25■□□□□ 0.03
CCDC50-202ENST00000392456 TMEM191AQ9H0A3 160 aa15.25■□□□□ 0.03
CCDC50-202ENST00000392456 IFI27L2Q9H2X8 130 aa15.25■□□□□ 0.03
CCDC50-202ENST00000392456 IDI2-AS1Q9NZ38 188 aa15.25■□□□□ 0.03
CCDC50-202ENST00000392456 HELZ2Q9BYK8 2649 aaKnown RBP15.25■□□□□ 0.03
CCDC50-202ENST00000392456 SPINK8P0C7L1 97 aa15.24■□□□□ 0.03
CCDC50-202ENST00000392456 PRB3Q04118 309 aaPredicted RBP15.24■□□□□ 0.03
CCDC50-202ENST00000392456 OR2T6Q8NHC8 308 aa15.24■□□□□ 0.03
CCDC50-202ENST00000392456 RAB37Q96AX2 223 aa15.24■□□□□ 0.03
CCDC50-202ENST00000392456 ABCA12Q86UK0 2595 aa15.24■□□□□ 0.03
CCDC50-202ENST00000392456 APCSP02743 223 aa15.24■□□□□ 0.03
CCDC50-202ENST00000392456 GPR12P47775 334 aa15.24■□□□□ 0.03
CCDC50-202ENST00000392456 TTC9CQ8N5M4 171 aa15.24■□□□□ 0.03
CCDC50-202ENST00000392456 GRAMD2BQ96HH9 432 aa15.24■□□□□ 0.03
CCDC50-202ENST00000392456 TNFRSF19Q9NS68 423 aa15.24■□□□□ 0.03
CCDC50-202ENST00000392456 HILPDAQ9Y5L2 63 aa15.24■□□□□ 0.03
CCDC50-202ENST00000392456 CSMD1Q96PZ7 3565 aa15.24■□□□□ 0.03
CCDC50-202ENST00000392456 A0A1W2PPV4 95 aa15.23■□□□□ 0.03
CCDC50-202ENST00000392456 C17orf98A8MV24 154 aa15.23■□□□□ 0.03
CCDC50-202ENST00000392456 ZNF714Q96N38 554 aa15.23■□□□□ 0.03
CCDC50-202ENST00000392456 TECRQ9NZ01 308 aaKnown RBP15.23■□□□□ 0.03
CCDC50-202ENST00000392456 PSENENQ9NZ42 101 aa15.23■□□□□ 0.03
CCDC50-202ENST00000392456 RPUSD1Q9UJJ7 312 aaKnown RBP15.23■□□□□ 0.03
CCDC50-202ENST00000392456 CYSLTR1Q9Y271 337 aa15.23■□□□□ 0.03
CCDC50-202ENST00000392456 ANAPC13Q9BS18 74 aa15.23■□□□□ 0.03
CCDC50-202ENST00000392456 KLF5Q13887 457 aaPredicted RBP15.22■□□□□ 0.03
CCDC50-202ENST00000392456 Q6ZRM9 215 aa15.22■□□□□ 0.03
CCDC50-202ENST00000392456 OVOL3O00110 214 aa15.22■□□□□ 0.03
CCDC50-202ENST00000392456 SYNGR2O43760 224 aa15.22■□□□□ 0.03
CCDC50-202ENST00000392456 IAPPP10997 89 aa15.22■□□□□ 0.03
CCDC50-202ENST00000392456 WFDC2Q14508 124 aa15.22■□□□□ 0.03
CCDC50-202ENST00000392456 DLX6P56179 175 aa15.21■□□□□ 0.03
CCDC50-202ENST00000392456 RNASEKQ6P5S7 137 aaKnown RBP15.21■□□□□ 0.03
CCDC50-202ENST00000392456 VGLL1Q99990 258 aa15.21■□□□□ 0.03
CCDC50-202ENST00000392456 WNK2Q9Y3S1 2297 aa15.21■□□□□ 0.03
CCDC50-202ENST00000392456 FSTL3O95633 263 aa15.21■□□□□ 0.02
CCDC50-202ENST00000392456 IGKV1-5P01602 117 aa15.21■□□□□ 0.02
CCDC50-202ENST00000392456 ZNF816Q0VGE8 651 aaPredicted RBP15.21■□□□□ 0.02
CCDC50-202ENST00000392456 SAMD5Q5TGI4 173 aa15.21■□□□□ 0.02
CCDC50-202ENST00000392456 NRGNQ92686 78 aa15.21■□□□□ 0.02
CCDC50-202ENST00000392456 SCO2A0A1W2PP80 73 aa15.2■□□□□ 0.02
CCDC50-202ENST00000392456 TMEM155Q4W5P6 130 aa15.2■□□□□ 0.02
CCDC50-202ENST00000392456 ZBTB34Q8NCN2 500 aa15.2■□□□□ 0.02
CCDC50-202ENST00000392456 DDB2Q92466 427 aa15.2■□□□□ 0.02
CCDC50-202ENST00000392456 GGTLC1Q9BX51 225 aa15.2■□□□□ 0.02
CCDC50-202ENST00000392456 C1QTNF4Q9BXJ3 329 aa15.2■□□□□ 0.02
CCDC50-202ENST00000392456 F8W1H4 67 aa15.2■□□□□ 0.02
CCDC50-202ENST00000392456 SAA2P0DJI9 122 aaPredicted RBP15.2■□□□□ 0.02
CCDC50-202ENST00000392456 DUTP33316 252 aaKnown RBP15.2■□□□□ 0.02
CCDC50-202ENST00000392456 EFNA4P52798 201 aa15.2■□□□□ 0.02
CCDC50-202ENST00000392456 SLC38A11Q08AI6 406 aa15.2■□□□□ 0.02
CCDC50-202ENST00000392456 IGFBPL1Q8WX77 278 aa15.2■□□□□ 0.02
CCDC50-202ENST00000392456 LIN7CQ9NUP9 197 aaKnown RBP15.2■□□□□ 0.02
CCDC50-202ENST00000392456 COL8A1P27658 744 aa15.19■□□□□ 0.02
CCDC50-202ENST00000392456 CDIP1Q9H305 208 aa15.19■□□□□ 0.02
CCDC50-202ENST00000392456 CACNG5Q9UF02 275 aa15.19■□□□□ 0.02
CCDC50-202ENST00000392456 SNAI2O43623 268 aa15.19■□□□□ 0.02
CCDC50-202ENST00000392456 SLC35B1P78383 322 aa15.19■□□□□ 0.02
CCDC50-202ENST00000392456 TIMD4Q96H15 378 aa15.19■□□□□ 0.02
CCDC50-202ENST00000392456 LY96Q9Y6Y9 160 aa15.19■□□□□ 0.02
CCDC50-202ENST00000392456 PIGBOS1A0A0B4J2F0 54 aa15.18■□□□□ 0.02
CCDC50-202ENST00000392456 MT-ATP8P03928 68 aa15.18■□□□□ 0.02
CCDC50-202ENST00000392456 DEFA4P12838 97 aa15.18■□□□□ 0.02
CCDC50-202ENST00000392456 LINC00173Q6ZV60 143 aa15.18■□□□□ 0.02
CCDC50-202ENST00000392456 TXNDC17Q9BRA2 123 aa15.18■□□□□ 0.02
CCDC50-202ENST00000392456 DOPEY2Q9Y3R5 2298 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms