RNA–Protein interactions for RNA: ENST00000390436.2

TRAV13-1-201, Transcript of T cell receptor alpha variable 13-1, humanhuman

APPRIS P1 BASIC

Gene TRAV13-1, Length 360 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1-201ENST00000390436 TSPAN5P62079 268 aa4.49□□□□□ -1.69
TRAV13-1-201ENST00000390436 NCS1P62166 190 aa4.49□□□□□ -1.69
TRAV13-1-201ENST00000390436 SNRPD3P62318 126 aaKnown RBP4.49□□□□□ -1.69
TRAV13-1-201ENST00000390436 Q6ZQT7 251 aa4.49□□□□□ -1.69
TRAV13-1-201ENST00000390436 LINC00612Q8N6U2 182 aa4.49□□□□□ -1.69
TRAV13-1-201ENST00000390436 C15orf53Q8NAA6 179 aa4.49□□□□□ -1.69
TRAV13-1-201ENST00000390436 ZBTB8BQ8NAP8 495 aaPredicted RBP4.49□□□□□ -1.69
TRAV13-1-201ENST00000390436 SLC24A4Q8NFF2 622 aa4.49□□□□□ -1.69
TRAV13-1-201ENST00000390436 FCGR1BQ92637 280 aa4.49□□□□□ -1.69
TRAV13-1-201ENST00000390436 S100A16Q96FQ6 103 aaKnown RBP4.49□□□□□ -1.69
TRAV13-1-201ENST00000390436 C7orf50Q9BRJ6 194 aaKnown RBP4.49□□□□□ -1.69
TRAV13-1-201ENST00000390436 TMEM222Q9H0R3 208 aa4.49□□□□□ -1.69
TRAV13-1-201ENST00000390436 MAGT1Q9H0U3 335 aa4.49□□□□□ -1.69
TRAV13-1-201ENST00000390436 MIXL1Q9H2W2 232 aa4.49□□□□□ -1.69
TRAV13-1-201ENST00000390436 Q9H3A6 140 aa4.49□□□□□ -1.69
TRAV13-1-201ENST00000390436 RBKSQ9H477 322 aa4.49□□□□□ -1.69
TRAV13-1-201ENST00000390436 COMMD3Q9UBI1 195 aa4.49□□□□□ -1.69
TRAV13-1-201ENST00000390436 TRAV30A0A087WSZ9 112 aa4.48□□□□□ -1.69
TRAV13-1-201ENST00000390436 PRAC2D3DTV9 90 aa4.48□□□□□ -1.69
TRAV13-1-201ENST00000390436 ZNF701M0R085 212 aaPredicted RBP4.48□□□□□ -1.69
TRAV13-1-201ENST00000390436 RANBP1P43487 201 aa4.48□□□□□ -1.69
TRAV13-1-201ENST00000390436 PSMB3P49720 205 aa4.48□□□□□ -1.69
TRAV13-1-201ENST00000390436 AP2S1P53680 142 aaPredicted RBP4.48□□□□□ -1.69
TRAV13-1-201ENST00000390436 FAM3BP58499 235 aaPredicted RBP4.48□□□□□ -1.69
TRAV13-1-201ENST00000390436 LYZP61626 148 aa4.48□□□□□ -1.69
TRAV13-1-201ENST00000390436 SUMO2P61956 95 aaKnown RBP4.48□□□□□ -1.69
TRAV13-1-201ENST00000390436 NUTF2P61970 127 aaKnown RBP4.48□□□□□ -1.69
TRAV13-1-201ENST00000390436 SUPT4H1P63272 117 aaKnown RBP4.48□□□□□ -1.69
TRAV13-1-201ENST00000390436 TRIM16LQ309B1 348 aa4.48□□□□□ -1.69
TRAV13-1-201ENST00000390436 KCTD21Q4G0X4 260 aa4.48□□□□□ -1.69
TRAV13-1-201ENST00000390436 LCE5AQ5TCM9 118 aa4.48□□□□□ -1.69
TRAV13-1-201ENST00000390436 CENPSQ8N2Z9 138 aa4.48□□□□□ -1.69
TRAV13-1-201ENST00000390436 RNASE8Q8TDE3 154 aaKnown RBP4.48□□□□□ -1.69
TRAV13-1-201ENST00000390436 RSG1Q9BU20 258 aa4.48□□□□□ -1.69
TRAV13-1-201ENST00000390436 VCXQ9H320 206 aa4.48□□□□□ -1.69
TRAV13-1-201ENST00000390436 SCPEP1Q9HB40 452 aa4.48□□□□□ -1.69
TRAV13-1-201ENST00000390436 NOP10Q9NPE3 64 aaKnown RBP4.48□□□□□ -1.69
TRAV13-1-201ENST00000390436 DOK5Q9P104 306 aa4.48□□□□□ -1.69
TRAV13-1-201ENST00000390436 GOLT1BQ9Y3E0 138 aa4.48□□□□□ -1.69
TRAV13-1-201ENST00000390436 FAT3Q8TDW7 4589 aa4.48□□□□□ -1.69
TRAV13-1-201ENST00000390436 A0A096LPF7 62 aa4.47□□□□□ -1.69
TRAV13-1-201ENST00000390436 LINC00854A0A1B0GVQ3 168 aa4.47□□□□□ -1.69
TRAV13-1-201ENST00000390436 CBY3A6NI87 242 aa4.47□□□□□ -1.69
TRAV13-1-201ENST00000390436 LYRM9A8MSI8 78 aa4.47□□□□□ -1.69
TRAV13-1-201ENST00000390436 CEBPZOSA8MTT3 80 aa4.47□□□□□ -1.69
TRAV13-1-201ENST00000390436 CORTO00230 105 aa4.47□□□□□ -1.69
TRAV13-1-201ENST00000390436 CCNKO75909 580 aa4.47□□□□□ -1.69
TRAV13-1-201ENST00000390436 NPSP0C0P6 89 aa4.47□□□□□ -1.69
TRAV13-1-201ENST00000390436 SLC25A4P12235 298 aa4.47□□□□□ -1.69
TRAV13-1-201ENST00000390436 RCVRNP35243 200 aa4.47□□□□□ -1.69
TRAV13-1-201ENST00000390436 VBP1P61758 197 aa4.47□□□□□ -1.69
TRAV13-1-201ENST00000390436 TMEM268Q5VZI3 342 aa4.47□□□□□ -1.69
TRAV13-1-201ENST00000390436 LYZL2Q7Z4W2 148 aa4.47□□□□□ -1.69
TRAV13-1-201ENST00000390436 OR52E5Q8NH55 327 aa4.47□□□□□ -1.69
TRAV13-1-201ENST00000390436 RNASEH2CQ8TDP1 164 aaKnown RBP4.47□□□□□ -1.69
TRAV13-1-201ENST00000390436 BORCS5Q969J3 196 aa4.47□□□□□ -1.69
TRAV13-1-201ENST00000390436 C18orf15Q96N68 181 aa4.47□□□□□ -1.69
TRAV13-1-201ENST00000390436 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.47□□□□□ -1.69
TRAV13-1-201ENST00000390436 RAB26Q9ULW5 256 aa4.47□□□□□ -1.69
TRAV13-1-201ENST00000390436 TEX13DA0A0J9YY54 714 aaPredicted RBP4.46□□□□□ -1.7
TRAV13-1-201ENST00000390436 ZNF98A6NK75 572 aa4.46□□□□□ -1.7
TRAV13-1-201ENST00000390436 H3BTX0 84 aa4.46□□□□□ -1.7
TRAV13-1-201ENST00000390436 ISLRO14498 428 aa4.46□□□□□ -1.7
TRAV13-1-201ENST00000390436 MRPS12O15235 138 aaKnown RBP4.46□□□□□ -1.7
TRAV13-1-201ENST00000390436 ATP5G1P05496 136 aa4.46□□□□□ -1.7
TRAV13-1-201ENST00000390436 IAPPP10997 89 aa4.46□□□□□ -1.7
TRAV13-1-201ENST00000390436 HTN1P15515 57 aa4.46□□□□□ -1.7
TRAV13-1-201ENST00000390436 TSPOP30536 169 aa4.46□□□□□ -1.7
TRAV13-1-201ENST00000390436 ATP5G3P48201 142 aa4.46□□□□□ -1.7
TRAV13-1-201ENST00000390436 ALDH3B2P48448 385 aa4.46□□□□□ -1.7
TRAV13-1-201ENST00000390436 SUB1P53999 127 aaKnown RBP eCLIP4.46□□□□□ -1.7
TRAV13-1-201ENST00000390436 KRTAP10-4P60372 401 aaPredicted RBP4.46□□□□□ -1.7
TRAV13-1-201ENST00000390436 OR5I1Q13606 314 aa4.46□□□□□ -1.7
TRAV13-1-201ENST00000390436 KLF9Q13886 244 aaPredicted RBP4.46□□□□□ -1.7
TRAV13-1-201ENST00000390436 MORN5Q5VZ52 161 aa4.46□□□□□ -1.7
TRAV13-1-201ENST00000390436 LPCAT3Q6P1A2 487 aa4.46□□□□□ -1.7
TRAV13-1-201ENST00000390436 PATE2Q6UY27 113 aa4.46□□□□□ -1.7
TRAV13-1-201ENST00000390436 Q6ZTI0 123 aa4.46□□□□□ -1.7
TRAV13-1-201ENST00000390436 TERB2Q8NHR7 220 aa4.46□□□□□ -1.7
TRAV13-1-201ENST00000390436 COQ8AQ8NI60 647 aa4.46□□□□□ -1.7
TRAV13-1-201ENST00000390436 RXFP4Q8TDU9 374 aa4.46□□□□□ -1.7
TRAV13-1-201ENST00000390436 ZNF486Q96H40 463 aaPredicted RBP4.46□□□□□ -1.7
TRAV13-1-201ENST00000390436 UPK3BQ9BT76 320 aa4.46□□□□□ -1.7
TRAV13-1-201ENST00000390436 TMPRSS5Q9H3S3 457 aa4.46□□□□□ -1.7
TRAV13-1-201ENST00000390436 SLC25A22Q9H936 323 aa4.46□□□□□ -1.7
TRAV13-1-201ENST00000390436 HSPB7Q9UBY9 170 aa4.46□□□□□ -1.7
TRAV13-1-201ENST00000390436 MTFP1Q9UDX5 166 aa4.46□□□□□ -1.7
TRAV13-1-201ENST00000390436 BLOC1S6Q9UL45 172 aa4.46□□□□□ -1.7
TRAV13-1-201ENST00000390436 GPR132Q9UNW8 380 aa4.46□□□□□ -1.7
TRAV13-1-201ENST00000390436 MRPS16Q9Y3D3 137 aaKnown RBP4.46□□□□□ -1.7
TRAV13-1-201ENST00000390436 A0A087WTM6 91 aa4.45□□□□□ -1.7
TRAV13-1-201ENST00000390436 TEX48A0A1B0GUV7 120 aa4.45□□□□□ -1.7
TRAV13-1-201ENST00000390436 CRYM-AS1A6NIL9 109 aa4.45□□□□□ -1.7
TRAV13-1-201ENST00000390436 ZFP92A6NM28 416 aa4.45□□□□□ -1.7
TRAV13-1-201ENST00000390436 SLC17A3O00476 420 aa4.45□□□□□ -1.7
TRAV13-1-201ENST00000390436 PITX3O75364 302 aa4.45□□□□□ -1.7
TRAV13-1-201ENST00000390436 GAGE7O76087 117 aa4.45□□□□□ -1.7
TRAV13-1-201ENST00000390436 INSP01308 110 aa4.45□□□□□ -1.7
TRAV13-1-201ENST00000390436 APOA1P02647 267 aa4.45□□□□□ -1.7
TRAV13-1-201ENST00000390436 GAGE12FP0CL80 117 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms