RNA–Protein interactions for RNA: ENST00000389993.7

PSME4-201, Transcript of proteasome activator subunit 4, humanhuman

TSL 1 (best)

Gene PSME4, Length 6,581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-201ENST00000389993 STAG3L2P0CL84 134 aa11.76□□□□□ -0.53
PSME4-201ENST00000389993 STAG3L3P0CL85 134 aa11.76□□□□□ -0.53
PSME4-201ENST00000389993 HIST1H2BOP23527 126 aa11.76□□□□□ -0.53
PSME4-201ENST00000389993 HIST1H2BBP33778 126 aa11.76□□□□□ -0.53
PSME4-201ENST00000389993 HIST1H2BDP58876 126 aa11.76□□□□□ -0.53
PSME4-201ENST00000389993 HIST1H2BCP62807 126 aa11.76□□□□□ -0.53
PSME4-201ENST00000389993 HIST2H2BEQ16778 126 aa11.76□□□□□ -0.53
PSME4-201ENST00000389993 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.76□□□□□ -0.53
PSME4-201ENST00000389993 HIST1H2BHQ93079 126 aa11.76□□□□□ -0.53
PSME4-201ENST00000389993 HIST1H2BNQ99877 126 aa11.76□□□□□ -0.53
PSME4-201ENST00000389993 HIST1H2BMQ99879 126 aa11.76□□□□□ -0.53
PSME4-201ENST00000389993 A0A1B0GWJ7 208 aa11.76□□□□□ -0.53
PSME4-201ENST00000389993 OVOL3O00110 214 aa11.76□□□□□ -0.53
PSME4-201ENST00000389993 DKK1O94907 266 aa11.76□□□□□ -0.53
PSME4-201ENST00000389993 PPP1R17O96001 155 aa11.76□□□□□ -0.53
PSME4-201ENST00000389993 GEMIN7Q9H840 131 aaKnown RBP11.76□□□□□ -0.53
PSME4-201ENST00000389993 PAX9P55771 341 aa11.76□□□□□ -0.53
PSME4-201ENST00000389993 RNF166Q96A37 237 aaPredicted RBP11.76□□□□□ -0.53
PSME4-201ENST00000389993 PEMTQ9UBM1 199 aa11.76□□□□□ -0.53
PSME4-201ENST00000389993 RITA1Q96K30 269 aa11.75□□□□□ -0.53
PSME4-201ENST00000389993 JMJD8Q96S16 334 aa11.75□□□□□ -0.53
PSME4-201ENST00000389993 DKK4Q9UBT3 224 aa11.75□□□□□ -0.53
PSME4-201ENST00000389993 TRBV6-6A0A0A6YYG2 114 aa11.75□□□□□ -0.53
PSME4-201ENST00000389993 NDUFB8O95169 186 aa11.75□□□□□ -0.53
PSME4-201ENST00000389993 FOXL1Q12952 345 aa11.75□□□□□ -0.53
PSME4-201ENST00000389993 CDC42EP3Q9UKI2 254 aa11.75□□□□□ -0.53
PSME4-201ENST00000389993 ARFGEF3Q5TH69 2177 aa11.75□□□□□ -0.53
PSME4-201ENST00000389993 C8orf49Q96NF6 230 aa11.75□□□□□ -0.53
PSME4-201ENST00000389993 ZNF257Q9Y2Q1 563 aa11.75□□□□□ -0.53
PSME4-201ENST00000389993 SHISA9B4DS77 424 aa11.74□□□□□ -0.53
PSME4-201ENST00000389993 NUTF2P61970 127 aaKnown RBP11.74□□□□□ -0.53
PSME4-201ENST00000389993 OR10J3Q5JRS4 329 aa11.74□□□□□ -0.53
PSME4-201ENST00000389993 MBD3L1Q8WWY6 194 aa11.74□□□□□ -0.53
PSME4-201ENST00000389993 IGLV1-44P01699 117 aa11.74□□□□□ -0.53
PSME4-201ENST00000389993 CTSZQ9UBR2 303 aa11.74□□□□□ -0.53
PSME4-201ENST00000389993 PRR14LQ5THK1 2151 aa11.74□□□□□ -0.53
PSME4-201ENST00000389993 A6NDN8 102 aa11.74□□□□□ -0.53
PSME4-201ENST00000389993 HAPLN4Q86UW8 402 aa11.74□□□□□ -0.53
PSME4-201ENST00000389993 TNFRSF14Q92956 283 aa11.74□□□□□ -0.53
PSME4-201ENST00000389993 MSMBP08118 114 aa11.74□□□□□ -0.53
PSME4-201ENST00000389993 PLA2G5P39877 138 aa11.74□□□□□ -0.53
PSME4-201ENST00000389993 TMEM70Q9BUB7 260 aa11.74□□□□□ -0.53
PSME4-201ENST00000389993 TMEM155Q4W5P6 130 aa11.73□□□□□ -0.53
PSME4-201ENST00000389993 LINC01356Q8N9X3 169 aa11.73□□□□□ -0.53
PSME4-201ENST00000389993 C15orf65H3BRN8 121 aa11.73□□□□□ -0.53
PSME4-201ENST00000389993 C11orf53Q8IXP5 236 aa11.73□□□□□ -0.53
PSME4-201ENST00000389993 NRN1Q9NPD7 142 aa11.73□□□□□ -0.53
PSME4-201ENST00000389993 KMT2EQ8IZD2 1858 aa11.73□□□□□ -0.53
PSME4-201ENST00000389993 NPC2P61916 151 aa11.73□□□□□ -0.53
PSME4-201ENST00000389993 TMEM95Q3KNT9 176 aa11.73□□□□□ -0.53
PSME4-201ENST00000389993 SLC25A34Q6PIV7 304 aa11.73□□□□□ -0.53
PSME4-201ENST00000389993 M0R1W7 72 aa11.73□□□□□ -0.53
PSME4-201ENST00000389993 LYZL1Q6UWQ5 148 aa11.73□□□□□ -0.53
PSME4-201ENST00000389993 ERVK11-1P61568 191 aa11.73□□□□□ -0.53
PSME4-201ENST00000389993 CFHR3Q02985 330 aa11.73□□□□□ -0.53
PSME4-201ENST00000389993 LCN12Q6JVE5 192 aa11.73□□□□□ -0.53
PSME4-201ENST00000389993 ORMDL3Q8N138 153 aa11.73□□□□□ -0.53
PSME4-201ENST00000389993 CIDEAO60543 219 aa11.72□□□□□ -0.53
PSME4-201ENST00000389993 TAS2R60P59551 318 aa11.72□□□□□ -0.53
PSME4-201ENST00000389993 LINC01551Q86U37 167 aa11.72□□□□□ -0.53
PSME4-201ENST00000389993 TNRC6AQ8NDV7 1962 aaKnown RBP11.72□□□□□ -0.53
PSME4-201ENST00000389993 PTPRSQ13332 1948 aa11.72□□□□□ -0.53
PSME4-201ENST00000389993 A0A1W2PRE2 83 aa11.72□□□□□ -0.53
PSME4-201ENST00000389993 NIT1Q86X76 327 aa11.72□□□□□ -0.53
PSME4-201ENST00000389993 TMEM256Q8N2U0 113 aa11.72□□□□□ -0.53
PSME4-201ENST00000389993 TEX29Q8N6K0 151 aa11.72□□□□□ -0.53
PSME4-201ENST00000389993 TRBV9A0A0B4J1U6 114 aa11.72□□□□□ -0.53
PSME4-201ENST00000389993 FAM90A9PA6NNJ1 464 aa11.72□□□□□ -0.53
PSME4-201ENST00000389993 SH2D1AO60880 128 aa11.72□□□□□ -0.53
PSME4-201ENST00000389993 A0A087WWL8 130 aa11.72□□□□□ -0.53
PSME4-201ENST00000389993 SNCGO76070 127 aa11.72□□□□□ -0.53
PSME4-201ENST00000389993 A0A087WWC5 75 aa11.71□□□□□ -0.53
PSME4-201ENST00000389993 PRTN3P24158 256 aa11.71□□□□□ -0.53
PSME4-201ENST00000389993 C22orf46C9J442 243 aa11.71□□□□□ -0.53
PSME4-201ENST00000389993 MST1LQ2TV78 715 aa11.71□□□□□ -0.53
PSME4-201ENST00000389993 SEM1Q6ZVN7 128 aa11.71□□□□□ -0.53
PSME4-201ENST00000389993 MKI67P46013 3256 aaKnown RBP11.71□□□□□ -0.53
PSME4-201ENST00000389993 MALRD1Q5VYJ5 2156 aa11.71□□□□□ -0.53
PSME4-201ENST00000389993 OR13C6PQ8NH95 151 aa11.71□□□□□ -0.53
PSME4-201ENST00000389993 UQCR10Q9UDW1 63 aa11.71□□□□□ -0.54
PSME4-201ENST00000389993 D6R8Y8 96 aa11.71□□□□□ -0.54
PSME4-201ENST00000389993 SPRY2O43597 315 aa11.71□□□□□ -0.54
PSME4-201ENST00000389993 ZNF726P1Q15940 193 aa11.71□□□□□ -0.54
PSME4-201ENST00000389993 PARD6GQ9BYG4 376 aaPredicted RBP11.71□□□□□ -0.54
PSME4-201ENST00000389993 COLCA2A8K830 154 aa11.7□□□□□ -0.54
PSME4-201ENST00000389993 M0QZK8 103 aa11.7□□□□□ -0.54
PSME4-201ENST00000389993 MINOS1Q5TGZ0 78 aa11.7□□□□□ -0.54
PSME4-201ENST00000389993 MINOS1-NBL1R4GNA1 71 aa11.7□□□□□ -0.54
PSME4-201ENST00000389993 BRCA2P51587 3418 aa11.7□□□□□ -0.54
PSME4-201ENST00000389993 BEND2Q8NDZ0 799 aa11.7□□□□□ -0.54
PSME4-201ENST00000389993 GSN-AS1Q9NRJ2 163 aa11.7□□□□□ -0.54
PSME4-201ENST00000389993 LMO1P25800 156 aa11.7□□□□□ -0.54
PSME4-201ENST00000389993 DEFB121Q5J5C9 76 aa11.7□□□□□ -0.54
PSME4-201ENST00000389993 RHPN1-AS1Q9BWJ2 59 aa11.7□□□□□ -0.54
PSME4-201ENST00000389993 COL5A1-AS1Q5SY13 56 aa11.7□□□□□ -0.54
PSME4-201ENST00000389993 MRAP2Q96G30 205 aa11.7□□□□□ -0.54
PSME4-201ENST00000389993 SPSB3Q6PJ21 355 aa11.7□□□□□ -0.54
PSME4-201ENST00000389993 SMIM12Q96EX1 92 aa11.7□□□□□ -0.54
PSME4-201ENST00000389993 KNCNA6PVL3 124 aa11.7□□□□□ -0.54
PSME4-201ENST00000389993 WT1-ASQ06250 92 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms