RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 ALS2Q96Q42 1657 aa4.82□□□□□ -1.64
RFX3-204ENST00000382004 TRBV7-1A0A0A6YYK4 115 aa4.82□□□□□ -1.64
RFX3-204ENST00000382004 SYS1-DBNDD2H3BUS1 97 aa4.82□□□□□ -1.64
RFX3-204ENST00000382004 LIME1Q9H400 295 aa4.82□□□□□ -1.64
RFX3-204ENST00000382004 AMN1Q8IY45 258 aa4.82□□□□□ -1.64
RFX3-204ENST00000382004 SVIPQ8NHG7 77 aa4.82□□□□□ -1.64
RFX3-204ENST00000382004 PAPPAQ13219 1627 aa4.82□□□□□ -1.64
RFX3-204ENST00000382004 IGHV2-26A0A0B4J1V2 119 aa4.82□□□□□ -1.64
RFX3-204ENST00000382004 H3BUX3 64 aa4.82□□□□□ -1.64
RFX3-204ENST00000382004 DKK1O94907 266 aa4.82□□□□□ -1.64
RFX3-204ENST00000382004 IFITM1P13164 125 aa4.82□□□□□ -1.64
RFX3-204ENST00000382004 PHF3Q92576 2039 aaKnown RBP4.82□□□□□ -1.64
RFX3-204ENST00000382004 TMEM256Q8N2U0 113 aa4.82□□□□□ -1.64
RFX3-204ENST00000382004 STPG4Q8N801 248 aa4.82□□□□□ -1.64
RFX3-204ENST00000382004 ZNF362Q5T0B9 420 aaPredicted RBP4.82□□□□□ -1.64
RFX3-204ENST00000382004 PCNX2A6NKB5 2137 aa4.82□□□□□ -1.64
RFX3-204ENST00000382004 CT83Q5H943 113 aa4.82□□□□□ -1.64
RFX3-204ENST00000382004 QSER1Q2KHR3 1735 aa4.82□□□□□ -1.64
RFX3-204ENST00000382004 A0A1W2PPI3 338 aa4.81□□□□□ -1.64
RFX3-204ENST00000382004 SMIM10L1P0DMW3 83 aa4.81□□□□□ -1.64
RFX3-204ENST00000382004 FAM166AQ6J272 317 aa4.81□□□□□ -1.64
RFX3-204ENST00000382004 SMIM10Q96HG1 83 aa4.81□□□□□ -1.64
RFX3-204ENST00000382004 HEATR5AQ86XA9 2040 aa4.81□□□□□ -1.64
RFX3-204ENST00000382004 IGFBP3P17936 291 aaPredicted RBP4.81□□□□□ -1.64
RFX3-204ENST00000382004 C1orf194Q5T5A4 169 aa4.81□□□□□ -1.64
RFX3-204ENST00000382004 CLPSL2Q6UWE3 100 aa4.81□□□□□ -1.64
RFX3-204ENST00000382004 FBLIM1Q8WUP2 373 aa4.81□□□□□ -1.64
RFX3-204ENST00000382004 BAALCQ8WXS3 180 aa4.81□□□□□ -1.64
RFX3-204ENST00000382004 C3orf79P0CE67 100 aa4.81□□□□□ -1.64
RFX3-204ENST00000382004 C1orf43Q9BWL3 253 aa4.81□□□□□ -1.64
RFX3-204ENST00000382004 THADAQ6YHU6 1953 aa4.81□□□□□ -1.64
RFX3-204ENST00000382004 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.81□□□□□ -1.64
RFX3-204ENST00000382004 WBP1Q96G27 269 aa4.81□□□□□ -1.64
RFX3-204ENST00000382004 TRBV25-1A0A075B6N4 114 aa4.81□□□□□ -1.64
RFX3-204ENST00000382004 GAS1P54826 345 aa4.81□□□□□ -1.64
RFX3-204ENST00000382004 XCL2Q9UBD3 114 aa4.81□□□□□ -1.64
RFX3-204ENST00000382004 WNK2Q9Y3S1 2297 aa4.81□□□□□ -1.64
RFX3-204ENST00000382004 TREML4Q6UXN2 200 aa4.81□□□□□ -1.64
RFX3-204ENST00000382004 CTHRC1Q96CG8 243 aa4.81□□□□□ -1.64
RFX3-204ENST00000382004 PRDM6Q9NQX0 595 aa4.81□□□□□ -1.64
RFX3-204ENST00000382004 PTPRFP10586 1907 aa4.81□□□□□ -1.64
RFX3-204ENST00000382004 IGHV1-18A0A0C4DH31 117 aa4.81□□□□□ -1.64
RFX3-204ENST00000382004 DEFB131AP59861 70 aa4.81□□□□□ -1.64
RFX3-204ENST00000382004 UBE2BP63146 152 aa4.81□□□□□ -1.64
RFX3-204ENST00000382004 TMEM200BQ69YZ2 307 aa4.81□□□□□ -1.64
RFX3-204ENST00000382004 TRPT1Q86TN4 253 aaKnown RBP4.81□□□□□ -1.64
RFX3-204ENST00000382004 USP54Q70EL1 1684 aa4.81□□□□□ -1.64
RFX3-204ENST00000382004 TRIOBPQ9H2D6 2365 aa4.8□□□□□ -1.64
RFX3-204ENST00000382004 LINC00271P0C7V0 271 aa4.8□□□□□ -1.64
RFX3-204ENST00000382004 GATA4P43694 442 aa4.8□□□□□ -1.64
RFX3-204ENST00000382004 RNF166Q96A37 237 aaPredicted RBP4.8□□□□□ -1.64
RFX3-204ENST00000382004 TSSC4Q9Y5U2 329 aaPredicted RBP4.8□□□□□ -1.64
RFX3-204ENST00000382004 LAMB2P55268 1798 aa4.8□□□□□ -1.64
RFX3-204ENST00000382004 IGHV1-3A0A0C4DH29 117 aa4.8□□□□□ -1.64
RFX3-204ENST00000382004 SHISA3A0PJX4 238 aa4.8□□□□□ -1.64
RFX3-204ENST00000382004 IGHV1-46P01743 117 aa4.8□□□□□ -1.64
RFX3-204ENST00000382004 ZNF672Q499Z4 452 aaPredicted RBP4.8□□□□□ -1.64
RFX3-204ENST00000382004 TP53TG1Q9Y2A0 90 aa4.8□□□□□ -1.64
RFX3-204ENST00000382004 A0A096LPF7 62 aa4.8□□□□□ -1.64
RFX3-204ENST00000382004 IGKV1-5P01602 117 aa4.8□□□□□ -1.64
RFX3-204ENST00000382004 SYNJ2BPP57105 145 aa4.8□□□□□ -1.64
RFX3-204ENST00000382004 SUPT4H1P63272 117 aaKnown RBP4.8□□□□□ -1.64
RFX3-204ENST00000382004 C9orf139Q6ZV77 190 aa4.8□□□□□ -1.64
RFX3-204ENST00000382004 TRBV20-1A0A075B6N2 111 aa4.8□□□□□ -1.64
RFX3-204ENST00000382004 IGHV3-38A0A0C4DH36 116 aa4.8□□□□□ -1.64
RFX3-204ENST00000382004 FGF6P10767 208 aa4.8□□□□□ -1.64
RFX3-204ENST00000382004 LYZL4Q96KX0 146 aa4.8□□□□□ -1.64
RFX3-204ENST00000382004 AGMATQ9BSE5 352 aa4.8□□□□□ -1.64
RFX3-204ENST00000382004 CACNA1GO43497 2377 aa4.8□□□□□ -1.64
RFX3-204ENST00000382004 PRSS29PA6NIE9 313 aa4.8□□□□□ -1.64
RFX3-204ENST00000382004 C1orf53Q5VUE5 145 aa4.8□□□□□ -1.64
RFX3-204ENST00000382004 FAM181AQ8N9Y4 354 aa4.8□□□□□ -1.64
RFX3-204ENST00000382004 GBF1Q92538 1859 aa4.8□□□□□ -1.64
RFX3-204ENST00000382004 DSCR9P59020 149 aa4.8□□□□□ -1.64
RFX3-204ENST00000382004 PRSS57Q6UWY2 283 aa4.8□□□□□ -1.64
RFX3-204ENST00000382004 TRGV9Q99603 122 aa4.8□□□□□ -1.64
RFX3-204ENST00000382004 A0A1B0GWJ7 208 aa4.8□□□□□ -1.64
RFX3-204ENST00000382004 WDR83OSQ9Y284 106 aa4.8□□□□□ -1.64
RFX3-204ENST00000382004 RNF114Q9Y508 228 aa4.8□□□□□ -1.64
RFX3-204ENST00000382004 A0A1W2PR77 199 aa4.8□□□□□ -1.64
RFX3-204ENST00000382004 FAM231BA6NCW3 169 aa4.8□□□□□ -1.64
RFX3-204ENST00000382004 WFDC9Q8NEX5 89 aa4.8□□□□□ -1.64
RFX3-204ENST00000382004 TMEM242Q9NWH2 141 aa4.8□□□□□ -1.64
RFX3-204ENST00000382004 WISP3O95389 354 aaPredicted RBP4.79□□□□□ -1.64
RFX3-204ENST00000382004 SLC25A16P16260 332 aa4.79□□□□□ -1.64
RFX3-204ENST00000382004 UTF1Q5T230 341 aa4.79□□□□□ -1.64
RFX3-204ENST00000382004 NEGR1Q7Z3B1 354 aa4.79□□□□□ -1.64
RFX3-204ENST00000382004 ATP6V0BQ99437 205 aa4.79□□□□□ -1.64
RFX3-204ENST00000382004 RHPN1-AS1Q9BWJ2 59 aa4.79□□□□□ -1.64
RFX3-204ENST00000382004 KLK9Q9UKQ9 250 aa4.79□□□□□ -1.64
RFX3-204ENST00000382004 ARAP2Q8WZ64 1704 aa4.79□□□□□ -1.64
RFX3-204ENST00000382004 IGHV4-4A0A075B6R2 117 aa4.79□□□□□ -1.64
RFX3-204ENST00000382004 AZU1P20160 251 aa4.79□□□□□ -1.64
RFX3-204ENST00000382004 CSRP2Q16527 193 aa4.79□□□□□ -1.64
RFX3-204ENST00000382004 SPINK13Q1W4C9 94 aa4.79□□□□□ -1.64
RFX3-204ENST00000382004 ARMS2P0C7Q2 107 aa4.79□□□□□ -1.64
RFX3-204ENST00000382004 GLRX5Q86SX6 157 aa4.79□□□□□ -1.64
RFX3-204ENST00000382004 COL11A1P12107 1806 aaPredicted RBP4.79□□□□□ -1.64
RFX3-204ENST00000382004 TRAV3A0A0B4J244 114 aa4.79□□□□□ -1.64
RFX3-204ENST00000382004 GAGE7O76087 117 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms