RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 IFITM3Q01628 133 aa10.19□□□□□ -0.78
CHD3-203ENST00000380358 DNAJC30Q96LL9 226 aa10.19□□□□□ -0.78
CHD3-203ENST00000380358 C1QTNF4Q9BXJ3 329 aa10.19□□□□□ -0.78
CHD3-203ENST00000380358 GUSBP1Q15486 140 aa10.19□□□□□ -0.78
CHD3-203ENST00000380358 GAS1P54826 345 aa10.18□□□□□ -0.78
CHD3-203ENST00000380358 TNRC6CQ9HCJ0 1690 aaKnown RBP10.18□□□□□ -0.78
CHD3-203ENST00000380358 A0A087WV48 116 aa10.18□□□□□ -0.78
CHD3-203ENST00000380358 CMC4P56277 68 aaPredicted RBP10.18□□□□□ -0.78
CHD3-203ENST00000380358 ZNRF2Q8NHG8 242 aa10.18□□□□□ -0.78
CHD3-203ENST00000380358 TEX48A0A1B0GUV7 120 aa10.18□□□□□ -0.78
CHD3-203ENST00000380358 C1QTNF5Q9BXJ0 243 aa10.18□□□□□ -0.78
CHD3-203ENST00000380358 VCYO14598 125 aa10.18□□□□□ -0.78
CHD3-203ENST00000380358 CRLF1O75462 422 aa10.18□□□□□ -0.78
CHD3-203ENST00000380358 TIMP3P35625 211 aa10.18□□□□□ -0.78
CHD3-203ENST00000380358 TNFSF13O75888 250 aa10.18□□□□□ -0.78
CHD3-203ENST00000380358 YPEL1O60688 119 aa10.17□□□□□ -0.78
CHD3-203ENST00000380358 GZMMP51124 257 aa10.17□□□□□ -0.78
CHD3-203ENST00000380358 YPEL2Q96QA6 119 aa10.17□□□□□ -0.78
CHD3-203ENST00000380358 MYMXA0A1B0GTQ4 84 aa10.17□□□□□ -0.78
CHD3-203ENST00000380358 A0A1B0GW15 77 aa10.17□□□□□ -0.78
CHD3-203ENST00000380358 CRYGCP07315 174 aa10.17□□□□□ -0.78
CHD3-203ENST00000380358 IGHV1-8P0DP01 117 aa10.17□□□□□ -0.78
CHD3-203ENST00000380358 MLANAQ16655 118 aa10.17□□□□□ -0.78
CHD3-203ENST00000380358 DOCK6Q96HP0 2047 aa10.17□□□□□ -0.78
CHD3-203ENST00000380358 TRBV25-1A0A075B6N4 114 aa10.17□□□□□ -0.78
CHD3-203ENST00000380358 CFHR2P36980 270 aa10.17□□□□□ -0.78
CHD3-203ENST00000380358 ZNF497Q6ZNH5 498 aa10.17□□□□□ -0.78
CHD3-203ENST00000380358 RFNGQ9Y644 331 aa10.17□□□□□ -0.78
CHD3-203ENST00000380358 TRAV26-2A0A0B4J265 109 aa10.17□□□□□ -0.78
CHD3-203ENST00000380358 XCL1P47992 114 aa10.17□□□□□ -0.78
CHD3-203ENST00000380358 PQLC2LA1A4F0 135 aa10.17□□□□□ -0.78
CHD3-203ENST00000380358 FAM90A9PA6NNJ1 464 aa10.17□□□□□ -0.78
CHD3-203ENST00000380358 IGHMP01871 453 aa10.17□□□□□ -0.78
CHD3-203ENST00000380358 CD5P06127 495 aa10.17□□□□□ -0.78
CHD3-203ENST00000380358 NR2C2APQ86WQ0 139 aa10.17□□□□□ -0.78
CHD3-203ENST00000380358 FAM90A1Q86YD7 464 aa10.17□□□□□ -0.78
CHD3-203ENST00000380358 PLEKHB2Q96CS7 222 aa10.17□□□□□ -0.78
CHD3-203ENST00000380358 DSCR8Q96T75 97 aa10.17□□□□□ -0.78
CHD3-203ENST00000380358 FAM90A2PQ658T7 463 aa10.17□□□□□ -0.78
CHD3-203ENST00000380358 A0A1W2PR77 199 aa10.16□□□□□ -0.78
CHD3-203ENST00000380358 WBP1Q96G27 269 aa10.16□□□□□ -0.78
CHD3-203ENST00000380358 LYZL4Q96KX0 146 aa10.16□□□□□ -0.78
CHD3-203ENST00000380358 MRPL52Q86TS9 123 aaKnown RBP10.16□□□□□ -0.78
CHD3-203ENST00000380358 TRBV7-1A0A0A6YYK4 115 aa10.16□□□□□ -0.78
CHD3-203ENST00000380358 CCL20P78556 96 aa10.16□□□□□ -0.78
CHD3-203ENST00000380358 PAQR4Q8N4S7 273 aaPredicted RBP10.16□□□□□ -0.78
CHD3-203ENST00000380358 LINC00587B1AMM8 73 aa10.16□□□□□ -0.78
CHD3-203ENST00000380358 PSG3Q16557 428 aa10.16□□□□□ -0.78
CHD3-203ENST00000380358 AMN1Q8IY45 258 aa10.16□□□□□ -0.78
CHD3-203ENST00000380358 SCN7AQ01118 1682 aa10.16□□□□□ -0.78
CHD3-203ENST00000380358 ERVH48-1M5A8F1 160 aa10.16□□□□□ -0.78
CHD3-203ENST00000380358 RBM38Q9H0Z9 239 aaKnown RBP10.16□□□□□ -0.78
CHD3-203ENST00000380358 PHF3Q92576 2039 aaKnown RBP10.16□□□□□ -0.78
CHD3-203ENST00000380358 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.16□□□□□ -0.78
CHD3-203ENST00000380358 ASPHD1Q5U4P2 390 aa10.16□□□□□ -0.78
CHD3-203ENST00000380358 C8orf49Q96NF6 230 aa10.16□□□□□ -0.78
CHD3-203ENST00000380358 LINC01619G3V211 115 aa10.15□□□□□ -0.78
CHD3-203ENST00000380358 LINC01590Q5TEZ4 76 aa10.15□□□□□ -0.78
CHD3-203ENST00000380358 MPV17L2Q567V2 206 aa10.15□□□□□ -0.78
CHD3-203ENST00000380358 LIME1Q9H400 295 aa10.15□□□□□ -0.78
CHD3-203ENST00000380358 TMEM242Q9NWH2 141 aa10.15□□□□□ -0.79
CHD3-203ENST00000380358 WNK2Q9Y3S1 2297 aa10.15□□□□□ -0.79
CHD3-203ENST00000380358 TRBV5-3A0A0A0MS03 114 aa10.14□□□□□ -0.79
CHD3-203ENST00000380358 NDUFS8O00217 210 aa10.14□□□□□ -0.79
CHD3-203ENST00000380358 MGST2Q99735 147 aa10.14□□□□□ -0.79
CHD3-203ENST00000380358 TMEM178BH3BS89 294 aa10.14□□□□□ -0.79
CHD3-203ENST00000380358 SOCS3O14543 225 aa10.14□□□□□ -0.79
CHD3-203ENST00000380358 C9orf153Q5TBE3 101 aa10.14□□□□□ -0.79
CHD3-203ENST00000380358 NPDC1Q9NQX5 325 aaPredicted RBP10.14□□□□□ -0.79
CHD3-203ENST00000380358 IGLV10-54A0A075B6I4 117 aa10.14□□□□□ -0.79
CHD3-203ENST00000380358 PRSS57Q6UWY2 283 aa10.14□□□□□ -0.79
CHD3-203ENST00000380358 SPATA25Q9BR10 227 aa10.14□□□□□ -0.79
CHD3-203ENST00000380358 DUTP33316 252 aaKnown RBP10.14□□□□□ -0.79
CHD3-203ENST00000380358 APOC4P55056 127 aa10.14□□□□□ -0.79
CHD3-203ENST00000380358 IGHV3-30P01768 117 aa10.14□□□□□ -0.79
CHD3-203ENST00000380358 IGHV3-33P01772 117 aa10.14□□□□□ -0.79
CHD3-203ENST00000380358 IGHV3-30-3P0DP02 117 aa10.14□□□□□ -0.79
CHD3-203ENST00000380358 IGHV3-30-5P0DP03 117 aa10.14□□□□□ -0.79
CHD3-203ENST00000380358 IGFBPL1Q8WX77 278 aa10.13□□□□□ -0.79
CHD3-203ENST00000380358 NABP1Q96AH0 204 aa10.13□□□□□ -0.79
CHD3-203ENST00000380358 CHAC1Q9BUX1 264 aa10.13□□□□□ -0.79
CHD3-203ENST00000380358 C14orf132Q9NPU4 83 aa10.13□□□□□ -0.79
CHD3-203ENST00000380358 SPINK8P0C7L1 97 aa10.13□□□□□ -0.79
CHD3-203ENST00000380358 SUPT4H1P63272 117 aaKnown RBP10.13□□□□□ -0.79
CHD3-203ENST00000380358 SIGLEC9Q9Y336 463 aa10.13□□□□□ -0.79
CHD3-203ENST00000380358 A0A1W2PPI3 338 aa10.13□□□□□ -0.79
CHD3-203ENST00000380358 NBL1P41271 181 aa10.13□□□□□ -0.79
CHD3-203ENST00000380358 G3V318 75 aa10.13□□□□□ -0.79
CHD3-203ENST00000380358 ATP5IP56385 69 aaPredicted RBP10.13□□□□□ -0.79
CHD3-203ENST00000380358 CR1LQ2VPA4 569 aa10.13□□□□□ -0.79
CHD3-203ENST00000380358 BUB1B-PAK6H3BSN5 160 aa10.13□□□□□ -0.79
CHD3-203ENST00000380358 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.13□□□□□ -0.79
CHD3-203ENST00000380358 STPG4Q8N801 248 aa10.13□□□□□ -0.79
CHD3-203ENST00000380358 MED12Q93074 2177 aa10.13□□□□□ -0.79
CHD3-203ENST00000380358 RGPD3A6NKT7 1758 aaPredicted RBP10.13□□□□□ -0.79
CHD3-203ENST00000380358 IGHG4P01861 327 aa10.13□□□□□ -0.79
CHD3-203ENST00000380358 TP53TG1Q9Y2A0 90 aa10.13□□□□□ -0.79
CHD3-203ENST00000380358 C4orf48Q5BLP8 95 aa10.12□□□□□ -0.79
CHD3-203ENST00000380358 DOCK3Q8IZD9 2030 aa10.12□□□□□ -0.79
CHD3-203ENST00000380358 MST1LQ2TV78 715 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms