RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 TCL1AP56279 114 aa15.31■□□□□ 0.04
SSU72-204ENST00000378726 KLF17Q5JT82 389 aaPredicted RBP15.31■□□□□ 0.04
SSU72-204ENST00000378726 TRGV9Q99603 122 aa15.31■□□□□ 0.04
SSU72-204ENST00000378726 NAT8BQ9UHF3 227 aa15.31■□□□□ 0.04
SSU72-204ENST00000378726 FBXL7Q9UJT9 491 aa15.31■□□□□ 0.04
SSU72-204ENST00000378726 ARL2-SNX15V9GYD0 113 aa15.31■□□□□ 0.04
SSU72-204ENST00000378726 TRBV9A0A0B4J1U6 114 aa15.3■□□□□ 0.04
SSU72-204ENST00000378726 PSMB11A5LHX3 300 aa15.3■□□□□ 0.04
SSU72-204ENST00000378726 IGLV2-8P01709 118 aa15.29■□□□□ 0.04
SSU72-204ENST00000378726 TMEM136Q6ZRR5 245 aa15.29■□□□□ 0.04
SSU72-204ENST00000378726 GSX1Q9H4S2 264 aaPredicted RBP15.29■□□□□ 0.04
SSU72-204ENST00000378726 NPIPB5A8MRT5 1133 aa15.29■□□□□ 0.04
SSU72-204ENST00000378726 HLA-DRB1P01911 266 aa15.29■□□□□ 0.04
SSU72-204ENST00000378726 EGR2P11161 476 aaPredicted RBP15.29■□□□□ 0.04
SSU72-204ENST00000378726 TMEM183BQ1AE95 376 aa15.29■□□□□ 0.04
SSU72-204ENST00000378726 TTC9CQ8N5M4 171 aa15.29■□□□□ 0.04
SSU72-204ENST00000378726 MEGF9Q9H1U4 602 aa15.29■□□□□ 0.04
SSU72-204ENST00000378726 OSTCQ9NRP0 149 aa15.29■□□□□ 0.04
SSU72-204ENST00000378726 COX7A2P2O60397 106 aa15.28■□□□□ 0.04
SSU72-204ENST00000378726 GPX1P07203 203 aa15.28■□□□□ 0.04
SSU72-204ENST00000378726 PLA2G2AP14555 144 aa15.28■□□□□ 0.04
SSU72-204ENST00000378726 SUMO1P63165 101 aaKnown RBP15.28■□□□□ 0.04
SSU72-204ENST00000378726 TIGITQ495A1 244 aa15.28■□□□□ 0.04
SSU72-204ENST00000378726 PATE2Q6UY27 113 aa15.28■□□□□ 0.04
SSU72-204ENST00000378726 OR1L4Q8NGR5 311 aa15.28■□□□□ 0.04
SSU72-204ENST00000378726 VAMP8Q9BV40 100 aa15.28■□□□□ 0.04
SSU72-204ENST00000378726 A0A096LNT2 108 aa15.28■□□□□ 0.04
SSU72-204ENST00000378726 K7EIM0 57 aa15.28■□□□□ 0.04
SSU72-204ENST00000378726 TAS2R45P59539 299 aa15.28■□□□□ 0.04
SSU72-204ENST00000378726 DEFB113Q30KQ7 82 aa15.28■□□□□ 0.04
SSU72-204ENST00000378726 SIGLECL1Q8N7X8 197 aa15.28■□□□□ 0.04
SSU72-204ENST00000378726 LINC01356Q8N9X3 169 aa15.28■□□□□ 0.04
SSU72-204ENST00000378726 RNF2Q99496 336 aa15.28■□□□□ 0.04
SSU72-204ENST00000378726 BEX4Q9NWD9 120 aaPredicted RBP15.28■□□□□ 0.04
SSU72-204ENST00000378726 CELSR1Q9NYQ6 3014 aa15.27■□□□□ 0.04
SSU72-204ENST00000378726 AVPP01185 164 aa15.27■□□□□ 0.04
SSU72-204ENST00000378726 C8orf88P0DMB2 117 aa15.27■□□□□ 0.04
SSU72-204ENST00000378726 GATA3P23771 443 aa15.27■□□□□ 0.04
SSU72-204ENST00000378726 C10orf113Q5VZT2 155 aa15.27■□□□□ 0.04
SSU72-204ENST00000378726 Q8N976 141 aa15.27■□□□□ 0.04
SSU72-204ENST00000378726 PIFOQ8TCI5 191 aa15.27■□□□□ 0.04
SSU72-204ENST00000378726 IGF2BP2-AS1Q96M15 143 aa15.27■□□□□ 0.04
SSU72-204ENST00000378726 RCHY1Q96PM5 261 aa15.27■□□□□ 0.04
SSU72-204ENST00000378726 FANCD2OSQ96PS1 177 aa15.27■□□□□ 0.04
SSU72-204ENST00000378726 MRPL32Q9BYC8 188 aaKnown RBP15.27■□□□□ 0.04
SSU72-204ENST00000378726 SOX21Q9Y651 276 aaPredicted RBP15.27■□□□□ 0.04
SSU72-204ENST00000378726 ABCA12Q86UK0 2595 aa15.27■□□□□ 0.03
SSU72-204ENST00000378726 TRAV5A0A0B4J249 113 aa15.27■□□□□ 0.03
SSU72-204ENST00000378726 J3QKU1 62 aa15.27■□□□□ 0.03
SSU72-204ENST00000378726 MGST1P10620 155 aaKnown RBP15.27■□□□□ 0.03
SSU72-204ENST00000378726 KRTDAPP60985 99 aa15.27■□□□□ 0.03
SSU72-204ENST00000378726 MORN5Q5VZ52 161 aa15.27■□□□□ 0.03
SSU72-204ENST00000378726 MAPK1IP1LQ8NDC0 245 aa15.27■□□□□ 0.03
SSU72-204ENST00000378726 ZFHX3Q15911 3703 aa15.26■□□□□ 0.03
SSU72-204ENST00000378726 ISLRO14498 428 aa15.26■□□□□ 0.03
SSU72-204ENST00000378726 ORM2P19652 201 aa15.26■□□□□ 0.03
SSU72-204ENST00000378726 MRPL54Q6P161 138 aaKnown RBP15.26■□□□□ 0.03
SSU72-204ENST00000378726 WDR73Q6P4I2 378 aa15.26■□□□□ 0.03
SSU72-204ENST00000378726 MT-ND6P03923 174 aa15.25■□□□□ 0.03
SSU72-204ENST00000378726 IGLC1P0CG04 106 aa15.25■□□□□ 0.03
SSU72-204ENST00000378726 BPIFB3P59826 476 aa15.25■□□□□ 0.03
SSU72-204ENST00000378726 IBA57Q5T440 356 aaKnown RBP15.25■□□□□ 0.03
SSU72-204ENST00000378726 TMEM219Q86XT9 240 aa15.25■□□□□ 0.03
SSU72-204ENST00000378726 NHLRC2Q8NBF2 726 aa15.25■□□□□ 0.03
SSU72-204ENST00000378726 IGLV11-55A0A075B6I3 123 aa15.25■□□□□ 0.03
SSU72-204ENST00000378726 A0A1W2PS18 150 aa15.25■□□□□ 0.03
SSU72-204ENST00000378726 RNF223E7ERA6 249 aa15.25■□□□□ 0.03
SSU72-204ENST00000378726 CA1P00915 261 aaPredicted RBP15.25■□□□□ 0.03
SSU72-204ENST00000378726 OR1B1Q8NGR6 318 aa15.25■□□□□ 0.03
SSU72-204ENST00000378726 NRN1Q9NPD7 142 aa15.25■□□□□ 0.03
SSU72-204ENST00000378726 SERTAD4Q9NUC0 356 aa15.25■□□□□ 0.03
SSU72-204ENST00000378726 SMIM27A0A1W2PRY6 76 aa15.24■□□□□ 0.03
SSU72-204ENST00000378726 BMPR1BO00238 502 aa15.24■□□□□ 0.03
SSU72-204ENST00000378726 OR10J3Q5JRS4 329 aa15.24■□□□□ 0.03
SSU72-204ENST00000378726 LRRC75A-AS1Q8N1F1 130 aa15.24■□□□□ 0.03
SSU72-204ENST00000378726 FAM167A-AS1Q96KT0 104 aa15.24■□□□□ 0.03
SSU72-204ENST00000378726 LINC00479Q96M42 142 aa15.24■□□□□ 0.03
SSU72-204ENST00000378726 NAV2Q8IVL1 2488 aa15.24■□□□□ 0.03
SSU72-204ENST00000378726 TENM4Q6N022 2769 aa15.24■□□□□ 0.03
SSU72-204ENST00000378726 A0A1W2PRE2 83 aa15.24■□□□□ 0.03
SSU72-204ENST00000378726 SH2D7A6NKC9 451 aaPredicted RBP15.24■□□□□ 0.03
SSU72-204ENST00000378726 AMY1AP04745 511 aa15.24■□□□□ 0.03
SSU72-204ENST00000378726 SRIP30626 198 aa15.24■□□□□ 0.03
SSU72-204ENST00000378726 LOXL1Q08397 574 aaPredicted RBP15.24■□□□□ 0.03
SSU72-204ENST00000378726 LINC00305Q7Z4B0 112 aa15.24■□□□□ 0.03
SSU72-204ENST00000378726 C5orf56Q8N8D9 126 aa15.24■□□□□ 0.03
SSU72-204ENST00000378726 KCNS1Q96KK3 526 aa15.24■□□□□ 0.03
SSU72-204ENST00000378726 TMUB1Q9BVT8 246 aa15.24■□□□□ 0.03
SSU72-204ENST00000378726 SLC25A2Q9BXI2 301 aa15.24■□□□□ 0.03
SSU72-204ENST00000378726 ZNF355PQ9NSJ1 428 aa15.24■□□□□ 0.03
SSU72-204ENST00000378726 ZNF586Q9NXT0 402 aa15.24■□□□□ 0.03
SSU72-204ENST00000378726 CDC42EP3Q9UKI2 254 aa15.24■□□□□ 0.03
SSU72-204ENST00000378726 DIRC3C9JPN6 131 aa15.23■□□□□ 0.03
SSU72-204ENST00000378726 ZNF253O75346 499 aa15.23■□□□□ 0.03
SSU72-204ENST00000378726 TGFAP01135 160 aa15.23■□□□□ 0.03
SSU72-204ENST00000378726 PSG1P11464 419 aa15.23■□□□□ 0.03
SSU72-204ENST00000378726 PMCHP20382 165 aa15.23■□□□□ 0.03
SSU72-204ENST00000378726 AMTP48728 403 aa15.23■□□□□ 0.03
SSU72-204ENST00000378726 RPL19P84098 196 aaKnown RBP15.23■□□□□ 0.03
SSU72-204ENST00000378726 COL5A1-AS1Q5SY13 56 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms