RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 KCNIP2Q9NS61 270 aa13.94□□□□□ -0.18
SSU72-203ENST00000378725 UBQLN2Q9UHD9 624 aa13.94□□□□□ -0.18
SSU72-203ENST00000378725 FRMD6-AS1P0C7T7 363 aa13.93□□□□□ -0.18
SSU72-203ENST00000378725 GALR1P47211 349 aa13.93□□□□□ -0.18
SSU72-203ENST00000378725 ZNF266Q14584 549 aa13.93□□□□□ -0.18
SSU72-203ENST00000378725 LINC00322Q6ZN03 302 aaPredicted RBP13.93□□□□□ -0.18
SSU72-203ENST00000378725 FAM24BQ8N5W8 94 aa13.93□□□□□ -0.18
SSU72-203ENST00000378725 C17orf77Q96MU5 243 aa13.93□□□□□ -0.18
SSU72-203ENST00000378725 CITED4Q96RK1 184 aa13.93□□□□□ -0.18
SSU72-203ENST00000378725 B9D2Q9BPU9 175 aa13.93□□□□□ -0.18
SSU72-203ENST00000378725 RSG1Q9BU20 258 aa13.93□□□□□ -0.18
SSU72-203ENST00000378725 HMSDA8MTL9 139 aa13.92□□□□□ -0.18
SSU72-203ENST00000378725 ARPC5O15511 151 aa13.92□□□□□ -0.18
SSU72-203ENST00000378725 RPL7P18124 248 aaKnown RBP13.92□□□□□ -0.18
SSU72-203ENST00000378725 MORN5Q5VZ52 161 aa13.92□□□□□ -0.18
SSU72-203ENST00000378725 MFFQ9GZY8 342 aa13.92□□□□□ -0.18
SSU72-203ENST00000378725 TUBA4BQ9H853 241 aa13.92□□□□□ -0.18
SSU72-203ENST00000378725 MAP6D1Q9H9H5 199 aa13.92□□□□□ -0.18
SSU72-203ENST00000378725 SOCS3O14543 225 aa13.91□□□□□ -0.18
SSU72-203ENST00000378725 MRPS12O15235 138 aaKnown RBP13.91□□□□□ -0.18
SSU72-203ENST00000378725 TCTE3Q8IZS6 198 aa13.91□□□□□ -0.18
SSU72-203ENST00000378725 SRD5A3Q9H8P0 318 aa13.91□□□□□ -0.18
SSU72-203ENST00000378725 TIMM9Q9Y5J7 89 aa13.91□□□□□ -0.18
SSU72-203ENST00000378725 hCG_2014768A0A024R1R8 64 aa13.9□□□□□ -0.18
SSU72-203ENST00000378725 RBMY1BA6NDE4 496 aaKnown RBP13.9□□□□□ -0.18
SSU72-203ENST00000378725 RBMY1EA6NEQ0 496 aaKnown RBP13.9□□□□□ -0.18
SSU72-203ENST00000378725 RBMY1DP0C7P1 496 aaKnown RBP13.9□□□□□ -0.18
SSU72-203ENST00000378725 DEFB131AP59861 70 aa13.9□□□□□ -0.18
SSU72-203ENST00000378725 GCSAMLQ5JQS6 135 aa13.9□□□□□ -0.18
SSU72-203ENST00000378725 TAAR5O14804 337 aa13.89□□□□□ -0.19
SSU72-203ENST00000378725 MEOX2P50222 304 aa13.89□□□□□ -0.19
SSU72-203ENST00000378725 ZNF345Q14585 488 aa13.89□□□□□ -0.19
SSU72-203ENST00000378725 SAMD13Q5VXD3 122 aa13.89□□□□□ -0.19
SSU72-203ENST00000378725 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.89□□□□□ -0.19
SSU72-203ENST00000378725 APRG1Q8IVJ8 170 aa13.89□□□□□ -0.19
SSU72-203ENST00000378725 RFNGQ9Y644 331 aa13.89□□□□□ -0.19
SSU72-203ENST00000378725 A0A087X0K7 114 aa13.88□□□□□ -0.19
SSU72-203ENST00000378725 TRAV5A0A0B4J249 113 aa13.88□□□□□ -0.19
SSU72-203ENST00000378725 A0A1B0GVG6 124 aa13.88□□□□□ -0.19
SSU72-203ENST00000378725 ZNF688P0C7X2 276 aa13.88□□□□□ -0.19
SSU72-203ENST00000378725 SNRPD3P62318 126 aaKnown RBP13.88□□□□□ -0.19
SSU72-203ENST00000378725 FFAR4Q5NUL3 377 aa13.88□□□□□ -0.19
SSU72-203ENST00000378725 RPL7L1Q6DKI1 246 aaKnown RBP13.88□□□□□ -0.19
SSU72-203ENST00000378725 BPIFA4PQ86YQ2 179 aa13.88□□□□□ -0.19
SSU72-203ENST00000378725 KCNRGQ8N5I3 272 aa13.88□□□□□ -0.19
SSU72-203ENST00000378725 BORCS7-ASMTA0A0B4J1R7 106 aa13.87□□□□□ -0.19
SSU72-203ENST00000378725 ATF4P18848 351 aaPredicted RBP13.87□□□□□ -0.19
SSU72-203ENST00000378725 ID1P41134 155 aa13.87□□□□□ -0.19
SSU72-203ENST00000378725 PSMB3P49720 205 aa13.87□□□□□ -0.19
SSU72-203ENST00000378725 ZNF124Q15973 351 aa13.87□□□□□ -0.19
SSU72-203ENST00000378725 FAM78BQ5VT40 261 aa13.87□□□□□ -0.19
SSU72-203ENST00000378725 SBSPONQ8IVN8 264 aa13.87□□□□□ -0.19
SSU72-203ENST00000378725 PSMG3Q9BT73 122 aaPredicted RBP13.87□□□□□ -0.19
SSU72-203ENST00000378725 CYTL1Q9NRR1 136 aa13.87□□□□□ -0.19
SSU72-203ENST00000378725 A0A0D9SG52 128 aa13.86□□□□□ -0.19
SSU72-203ENST00000378725 ISLRO14498 428 aa13.86□□□□□ -0.19
SSU72-203ENST00000378725 JTBO76095 146 aa13.86□□□□□ -0.19
SSU72-203ENST00000378725 ATP6V0CP27449 155 aa13.86□□□□□ -0.19
SSU72-203ENST00000378725 PSMG4Q5JS54 123 aa13.86□□□□□ -0.19
SSU72-203ENST00000378725 HSD17B11Q8NBQ5 300 aa13.86□□□□□ -0.19
SSU72-203ENST00000378725 OR2G3Q8NGZ4 309 aa13.86□□□□□ -0.19
SSU72-203ENST00000378725 MRPL32Q9BYC8 188 aaKnown RBP13.86□□□□□ -0.19
SSU72-203ENST00000378725 TMEM14CQ9P0S9 112 aa13.86□□□□□ -0.19
SSU72-203ENST00000378725 LOC102724200A0A096LPH7 203 aaPredicted RBP13.85□□□□□ -0.19
SSU72-203ENST00000378725 NHLRC4P0CG21 123 aaPredicted RBP13.85□□□□□ -0.19
SSU72-203ENST00000378725 IGLC2P0DOY2 106 aa13.85□□□□□ -0.19
SSU72-203ENST00000378725 CXCL2P19875 107 aa13.85□□□□□ -0.19
SSU72-203ENST00000378725 HAGHQ16775 308 aa13.85□□□□□ -0.19
SSU72-203ENST00000378725 SPATA31B1PQ5VZV4 182 aa13.85□□□□□ -0.19
SSU72-203ENST00000378725 AKAP14Q86UN6 197 aa13.85□□□□□ -0.19
SSU72-203ENST00000378725 FAM167A-AS1Q96KT0 104 aa13.85□□□□□ -0.19
SSU72-203ENST00000378725 C16orf92Q96LL3 132 aa13.85□□□□□ -0.19
SSU72-203ENST00000378725 ASCL2Q99929 193 aa13.85□□□□□ -0.19
SSU72-203ENST00000378725 FUT9Q9Y231 359 aa13.85□□□□□ -0.19
SSU72-203ENST00000378725 PRKDCP78527 4128 aaKnown RBP13.85□□□□□ -0.19
SSU72-203ENST00000378725 TRAV8-2A0A0B4J237 113 aa13.84□□□□□ -0.19
SSU72-203ENST00000378725 C1QBP02746 253 aa13.84□□□□□ -0.19
SSU72-203ENST00000378725 M6PRP20645 277 aa13.84□□□□□ -0.19
SSU72-203ENST00000378725 SERF2P84101 59 aa13.84□□□□□ -0.19
SSU72-203ENST00000378725 ACOT6Q3I5F7 207 aaPredicted RBP13.84□□□□□ -0.19
SSU72-203ENST00000378725 MIR17HGQ75NE6 70 aa13.84□□□□□ -0.19
SSU72-203ENST00000378725 GNPNAT1Q96EK6 184 aaPredicted RBP13.84□□□□□ -0.19
SSU72-203ENST00000378725 ARPC5LQ9BPX5 153 aa13.84□□□□□ -0.19
SSU72-203ENST00000378725 SLC25A2Q9BXI2 301 aa13.84□□□□□ -0.19
SSU72-203ENST00000378725 HRH4Q9H3N8 390 aa13.84□□□□□ -0.19
SSU72-203ENST00000378725 H3BQ15 152 aa13.83□□□□□ -0.2
SSU72-203ENST00000378725 C20orf173Q96LM9 149 aa13.83□□□□□ -0.2
SSU72-203ENST00000378725 LINC00052Q96N35 136 aa13.83□□□□□ -0.2
SSU72-203ENST00000378725 RHOBP62745 196 aa13.82□□□□□ -0.2
SSU72-203ENST00000378725 GUK1Q16774 197 aa13.82□□□□□ -0.2
SSU72-203ENST00000378725 SAT2Q96F10 170 aaPredicted RBP13.82□□□□□ -0.2
SSU72-203ENST00000378725 TM2D3Q9BRN9 247 aa13.82□□□□□ -0.2
SSU72-203ENST00000378725 SH3BGRL3Q9H299 93 aa13.82□□□□□ -0.2
SSU72-203ENST00000378725 KIR2DL5BA0A0G2JN68 375 aa13.81□□□□□ -0.2
SSU72-203ENST00000378725 KIR2DL5BA0A0G2JPC4 375 aa13.81□□□□□ -0.2
SSU72-203ENST00000378725 KNCNA6PVL3 124 aa13.81□□□□□ -0.2
SSU72-203ENST00000378725 MBP02144 154 aa13.81□□□□□ -0.2
SSU72-203ENST00000378725 HIST1H1EP10412 219 aaKnown RBP13.81□□□□□ -0.2
SSU72-203ENST00000378725 LCN15Q6UWW0 184 aa13.81□□□□□ -0.2
SSU72-203ENST00000378725 TMUB2Q71RG4 321 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms