RNA–Protein interactions for RNA: ENST00000378307.9

RAB4B-202, Transcript of RAB4B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB4B, Length 890 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4B-202ENST00000378307 AGPAT2O15120 278 aa11.14□□□□□ -0.63
RAB4B-202ENST00000378307 HYPMO75409 117 aa11.14□□□□□ -0.63
RAB4B-202ENST00000378307 OR5G3P0C626 314 aa11.14□□□□□ -0.63
RAB4B-202ENST00000378307 ID1P41134 155 aa11.14□□□□□ -0.63
RAB4B-202ENST00000378307 GALR1P47211 349 aa11.14□□□□□ -0.63
RAB4B-202ENST00000378307 BCAP31P51572 246 aa11.14□□□□□ -0.63
RAB4B-202ENST00000378307 CAV2P51636 162 aa11.14□□□□□ -0.63
RAB4B-202ENST00000378307 FXYD7P58549 80 aa11.14□□□□□ -0.63
RAB4B-202ENST00000378307 SELENOTP62341 195 aa11.14□□□□□ -0.63
RAB4B-202ENST00000378307 CEMP1Q6PRD7 247 aaPredicted RBP11.14□□□□□ -0.63
RAB4B-202ENST00000378307 TMEM217Q8N7C4 229 aa11.14□□□□□ -0.63
RAB4B-202ENST00000378307 GGACTQ9BVM4 153 aa11.14□□□□□ -0.63
RAB4B-202ENST00000378307 ARL6Q9H0F7 186 aa11.14□□□□□ -0.63
RAB4B-202ENST00000378307 XCL2Q9UBD3 114 aa11.14□□□□□ -0.63
RAB4B-202ENST00000378307 KMT2AQ03164 3969 aa11.14□□□□□ -0.63
RAB4B-202ENST00000378307 IGHV4-28A0A0C4DH34 117 aa11.13□□□□□ -0.63
RAB4B-202ENST00000378307 S100A10P60903 97 aa11.13□□□□□ -0.63
RAB4B-202ENST00000378307 TMEM41BQ5BJD5 291 aa11.13□□□□□ -0.63
RAB4B-202ENST00000378307 FOXI2Q6ZQN5 318 aa11.13□□□□□ -0.63
RAB4B-202ENST00000378307 ZNF709Q8N972 641 aa11.13□□□□□ -0.63
RAB4B-202ENST00000378307 C16orf92Q96LL3 132 aa11.13□□□□□ -0.63
RAB4B-202ENST00000378307 ELOA3CA0A087WX78 387 aaPredicted RBP11.12□□□□□ -0.63
RAB4B-202ENST00000378307 INMT-MINDY4F8WBC2 141 aa11.12□□□□□ -0.63
RAB4B-202ENST00000378307 MRPS12O15235 138 aaKnown RBP11.12□□□□□ -0.63
RAB4B-202ENST00000378307 PRB4P10163 310 aaPredicted RBP11.12□□□□□ -0.63
RAB4B-202ENST00000378307 RAP2BP61225 183 aa11.12□□□□□ -0.63
RAB4B-202ENST00000378307 MORN5Q5VZ52 161 aa11.12□□□□□ -0.63
RAB4B-202ENST00000378307 RNF182Q8N6D2 247 aa11.12□□□□□ -0.63
RAB4B-202ENST00000378307 TMEM252Q8N6L7 170 aa11.12□□□□□ -0.63
RAB4B-202ENST00000378307 C11orf45Q8TAV5 145 aa11.12□□□□□ -0.63
RAB4B-202ENST00000378307 PHLDA1Q8WV24 401 aaPredicted RBP11.12□□□□□ -0.63
RAB4B-202ENST00000378307 SLC35B3Q9H1N7 401 aa11.12□□□□□ -0.63
RAB4B-202ENST00000378307 ARV1Q9H2C2 271 aa11.12□□□□□ -0.63
RAB4B-202ENST00000378307 BATF3Q9NR55 127 aa11.12□□□□□ -0.63
RAB4B-202ENST00000378307 LYRM2Q9NU23 88 aaPredicted RBP11.12□□□□□ -0.63
RAB4B-202ENST00000378307 A0A0J9YX75 114 aa11.11□□□□□ -0.63
RAB4B-202ENST00000378307 NUPR2A6NF83 97 aa11.11□□□□□ -0.63
RAB4B-202ENST00000378307 GOSR2O14653 212 aa11.11□□□□□ -0.63
RAB4B-202ENST00000378307 HLA-DMBP28068 263 aa11.11□□□□□ -0.63
RAB4B-202ENST00000378307 MEOX2P50222 304 aa11.11□□□□□ -0.63
RAB4B-202ENST00000378307 FAM78BQ5VT40 261 aa11.11□□□□□ -0.63
RAB4B-202ENST00000378307 OR4B1Q8NGF8 309 aa11.11□□□□□ -0.63
RAB4B-202ENST00000378307 TMEM37Q8WXS4 190 aa11.11□□□□□ -0.63
RAB4B-202ENST00000378307 GPR82Q96P67 336 aa11.11□□□□□ -0.63
RAB4B-202ENST00000378307 MARVELD1Q9BSK0 173 aa11.11□□□□□ -0.63
RAB4B-202ENST00000378307 GPN1Q9HCN4 374 aaPredicted RBP11.11□□□□□ -0.63
RAB4B-202ENST00000378307 H0YIZ8 118 aa11.1□□□□□ -0.63
RAB4B-202ENST00000378307 SNRPCP09234 159 aaKnown RBP11.1□□□□□ -0.63
RAB4B-202ENST00000378307 ZNF705DP0CH99 300 aaPredicted RBP11.1□□□□□ -0.63
RAB4B-202ENST00000378307 ZNF705BP0CI00 300 aaPredicted RBP11.1□□□□□ -0.63
RAB4B-202ENST00000378307 MIFP14174 115 aa11.1□□□□□ -0.63
RAB4B-202ENST00000378307 PVALBP20472 110 aaPredicted RBP11.1□□□□□ -0.63
RAB4B-202ENST00000378307 SULT1A1P50225 295 aa11.1□□□□□ -0.63
RAB4B-202ENST00000378307 FGL1Q08830 312 aa11.1□□□□□ -0.63
RAB4B-202ENST00000378307 VWC2Q2TAL6 325 aa11.1□□□□□ -0.63
RAB4B-202ENST00000378307 MIC13Q5XKP0 118 aa11.1□□□□□ -0.63
RAB4B-202ENST00000378307 LINC00305Q7Z4B0 112 aa11.1□□□□□ -0.63
RAB4B-202ENST00000378307 ZNF546Q86UE3 836 aa11.1□□□□□ -0.63
RAB4B-202ENST00000378307 RPRMQ9NS64 109 aa11.1□□□□□ -0.63
RAB4B-202ENST00000378307 JTBO76095 146 aa11.09□□□□□ -0.63
RAB4B-202ENST00000378307 RPL7P18124 248 aaKnown RBP11.09□□□□□ -0.63
RAB4B-202ENST00000378307 CAMLGP49069 296 aa11.09□□□□□ -0.63
RAB4B-202ENST00000378307 NUTF2P61970 127 aaKnown RBP11.09□□□□□ -0.63
RAB4B-202ENST00000378307 CLUHP3Q96NS8 147 aa11.09□□□□□ -0.63
RAB4B-202ENST00000378307 UQCC1Q9NVA1 299 aa11.09□□□□□ -0.63
RAB4B-202ENST00000378307 OR5AC2Q9NZP5 309 aa11.09□□□□□ -0.63
RAB4B-202ENST00000378307 WDR83OSQ9Y284 106 aa11.09□□□□□ -0.63
RAB4B-202ENST00000378307 EPPK1P58107 5090 aaKnown RBP11.08□□□□□ -0.64
RAB4B-202ENST00000378307 A0A087X0K7 114 aa11.08□□□□□ -0.64
RAB4B-202ENST00000378307 A8MTW9 85 aa11.08□□□□□ -0.64
RAB4B-202ENST00000378307 PRAF2O60831 178 aa11.08□□□□□ -0.64
RAB4B-202ENST00000378307 H2BFSP57053 126 aa11.08□□□□□ -0.64
RAB4B-202ENST00000378307 PRR20EP86478 221 aa11.08□□□□□ -0.64
RAB4B-202ENST00000378307 PRR20CP86479 221 aa11.08□□□□□ -0.64
RAB4B-202ENST00000378307 PRR20DP86480 221 aa11.08□□□□□ -0.64
RAB4B-202ENST00000378307 PRR20BP86481 221 aa11.08□□□□□ -0.64
RAB4B-202ENST00000378307 PRR20AP86496 221 aa11.08□□□□□ -0.64
RAB4B-202ENST00000378307 NHLH2Q02577 135 aa11.08□□□□□ -0.64
RAB4B-202ENST00000378307 SAMD13Q5VXD3 122 aa11.08□□□□□ -0.64
RAB4B-202ENST00000378307 EBLN2Q6P2I7 272 aa11.08□□□□□ -0.64
RAB4B-202ENST00000378307 AMTNQ6UX39 209 aa11.08□□□□□ -0.64
RAB4B-202ENST00000378307 ZNF705AQ6ZN79 300 aaPredicted RBP11.08□□□□□ -0.64
RAB4B-202ENST00000378307 C1QTNF4Q9BXJ3 329 aa11.08□□□□□ -0.64
RAB4B-202ENST00000378307 NMES1Q9C002 83 aa11.08□□□□□ -0.64
RAB4B-202ENST00000378307 CELA1Q9UNI1 258 aa11.08□□□□□ -0.64
RAB4B-202ENST00000378307 TRAV5A0A0B4J249 113 aa11.07□□□□□ -0.64
RAB4B-202ENST00000378307 UBE2L5PA0A1B0GUS4 154 aa11.07□□□□□ -0.64
RAB4B-202ENST00000378307 ZNF705FA8MVS1 300 aaPredicted RBP11.07□□□□□ -0.64
RAB4B-202ENST00000378307 CXCL3P19876 107 aa11.07□□□□□ -0.64
RAB4B-202ENST00000378307 S100A7P31151 101 aa11.07□□□□□ -0.64
RAB4B-202ENST00000378307 S100A11P31949 105 aa11.07□□□□□ -0.64
RAB4B-202ENST00000378307 PSG9Q00887 426 aa11.07□□□□□ -0.64
RAB4B-202ENST00000378307 OPCMLQ14982 345 aa11.07□□□□□ -0.64
RAB4B-202ENST00000378307 LRRC37A5PQ49AS3 106 aa11.07□□□□□ -0.64
RAB4B-202ENST00000378307 PXDC1Q5TGL8 231 aa11.07□□□□□ -0.64
RAB4B-202ENST00000378307 SPATA31B1PQ5VZV4 182 aa11.07□□□□□ -0.64
RAB4B-202ENST00000378307 C1orf158Q8N1D5 194 aa11.07□□□□□ -0.64
RAB4B-202ENST00000378307 LINC00476Q8WZB0 136 aa11.07□□□□□ -0.64
RAB4B-202ENST00000378307 IGHV3OR16-12A0A075B7B8 117 aa11.06□□□□□ -0.64
RAB4B-202ENST00000378307 H3BTX0 84 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms