RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 IGHV3-43DP0DP04 118 aa9.62□□□□□ -0.87
NPHP4-202ENST00000378161 LINC01559Q495D7 138 aa9.62□□□□□ -0.87
NPHP4-202ENST00000378161 CXXC4Q9H2H0 198 aa9.62□□□□□ -0.87
NPHP4-202ENST00000378161 ZNF441Q8N8Z8 693 aa9.62□□□□□ -0.87
NPHP4-202ENST00000378161 C11orf1Q9H5F2 150 aa9.62□□□□□ -0.87
NPHP4-202ENST00000378161 A0A087WX48 190 aa9.62□□□□□ -0.87
NPHP4-202ENST00000378161 MPV17P39210 176 aa9.62□□□□□ -0.87
NPHP4-202ENST00000378161 HRCT1Q6UXD1 115 aa9.62□□□□□ -0.87
NPHP4-202ENST00000378161 PRNTQ86SH4 94 aa9.62□□□□□ -0.87
NPHP4-202ENST00000378161 TCF19Q9Y242 345 aa9.62□□□□□ -0.87
NPHP4-202ENST00000378161 KIAA1549Q9HCM3 1950 aa9.62□□□□□ -0.87
NPHP4-202ENST00000378161 TRPM7Q96QT4 1865 aa9.62□□□□□ -0.87
NPHP4-202ENST00000378161 THSD7BQ9C0I4 1608 aa9.62□□□□□ -0.87
NPHP4-202ENST00000378161 LOC107984640A0A0U1RRK4 108 aa9.61□□□□□ -0.87
NPHP4-202ENST00000378161 CD24P25063 80 aa9.61□□□□□ -0.87
NPHP4-202ENST00000378161 NABP1Q96AH0 204 aa9.61□□□□□ -0.87
NPHP4-202ENST00000378161 CDIP1Q9H305 208 aa9.61□□□□□ -0.87
NPHP4-202ENST00000378161 ATXN8Q156A1 80 aa9.61□□□□□ -0.87
NPHP4-202ENST00000378161 PLXNA4Q9HCM2 1894 aa9.61□□□□□ -0.87
NPHP4-202ENST00000378161 TRAV4A0A0B4J268 109 aa9.61□□□□□ -0.87
NPHP4-202ENST00000378161 LEPP41159 167 aa9.61□□□□□ -0.87
NPHP4-202ENST00000378161 TMEM170BQ5T4T1 132 aa9.61□□□□□ -0.87
NPHP4-202ENST00000378161 DLL3Q9NYJ7 618 aa9.61□□□□□ -0.87
NPHP4-202ENST00000378161 SIGLEC9Q9Y336 463 aa9.61□□□□□ -0.87
NPHP4-202ENST00000378161 IGKV1-5P01602 117 aa9.61□□□□□ -0.87
NPHP4-202ENST00000378161 PCOLCEQ15113 449 aa9.61□□□□□ -0.87
NPHP4-202ENST00000378161 PRR30Q53SZ7 412 aaPredicted RBP9.61□□□□□ -0.87
NPHP4-202ENST00000378161 Q6Q795 121 aa9.61□□□□□ -0.87
NPHP4-202ENST00000378161 MRPL32Q9BYC8 188 aaKnown RBP9.61□□□□□ -0.87
NPHP4-202ENST00000378161 C21orf62Q9NYP8 219 aa9.61□□□□□ -0.87
NPHP4-202ENST00000378161 FANCMQ8IYD8 2048 aa9.6□□□□□ -0.87
NPHP4-202ENST00000378161 ZNF815PA8K554 130 aa9.6□□□□□ -0.87
NPHP4-202ENST00000378161 K7EMI3 77 aa9.6□□□□□ -0.87
NPHP4-202ENST00000378161 ZIC3O60481 467 aa9.6□□□□□ -0.87
NPHP4-202ENST00000378161 LYZL6O75951 148 aa9.6□□□□□ -0.87
NPHP4-202ENST00000378161 LINC00271P0C7V0 271 aa9.6□□□□□ -0.87
NPHP4-202ENST00000378161 FXYD7P58549 80 aa9.6□□□□□ -0.87
NPHP4-202ENST00000378161 ABHD12Q8N2K0 398 aa9.6□□□□□ -0.87
NPHP4-202ENST00000378161 C3orf22Q8N5N4 141 aa9.6□□□□□ -0.87
NPHP4-202ENST00000378161 NFAM1Q8NET5 270 aaPredicted RBP9.6□□□□□ -0.87
NPHP4-202ENST00000378161 MAGEA5P43359 124 aa9.6□□□□□ -0.87
NPHP4-202ENST00000378161 FAM214BQ7L5A3 538 aa9.6□□□□□ -0.87
NPHP4-202ENST00000378161 DRAM1Q8N682 238 aa9.6□□□□□ -0.87
NPHP4-202ENST00000378161 CHCHD2Q9Y6H1 151 aaPredicted RBP9.6□□□□□ -0.87
NPHP4-202ENST00000378161 PHF3Q92576 2039 aaKnown RBP9.6□□□□□ -0.87
NPHP4-202ENST00000378161 IGLV3-12A0A075B6K2 115 aa9.6□□□□□ -0.87
NPHP4-202ENST00000378161 F8WDY8 70 aa9.6□□□□□ -0.87
NPHP4-202ENST00000378161 IFI27P40305 119 aaPredicted RBP9.6□□□□□ -0.87
NPHP4-202ENST00000378161 VKORC1Q9BQB6 163 aa9.6□□□□□ -0.87
NPHP4-202ENST00000378161 NPIPB11E5RHQ5 1161 aa9.59□□□□□ -0.87
NPHP4-202ENST00000378161 SYNGR3O43761 229 aa9.59□□□□□ -0.87
NPHP4-202ENST00000378161 CD7P09564 240 aa9.59□□□□□ -0.87
NPHP4-202ENST00000378161 TREML4Q6UXN2 200 aa9.59□□□□□ -0.87
NPHP4-202ENST00000378161 SRXN1Q9BYN0 137 aa9.59□□□□□ -0.87
NPHP4-202ENST00000378161 PLXNA2O75051 1894 aa9.59□□□□□ -0.87
NPHP4-202ENST00000378161 IGLV3-32A0A0A0MS00 114 aa9.59□□□□□ -0.87
NPHP4-202ENST00000378161 VWC2LB2RUY7 222 aa9.59□□□□□ -0.87
NPHP4-202ENST00000378161 NDUFC2O95298 119 aa9.59□□□□□ -0.87
NPHP4-202ENST00000378161 IGLC6P0CF74 106 aa9.59□□□□□ -0.87
NPHP4-202ENST00000378161 MYO7BQ6PIF6 2116 aa9.59□□□□□ -0.87
NPHP4-202ENST00000378161 FAM231DQ6ZW35 169 aa9.59□□□□□ -0.87
NPHP4-202ENST00000378161 TINCRA0A1B0GVN0 87 aa9.59□□□□□ -0.87
NPHP4-202ENST00000378161 DUSP14O95147 198 aaKnown RBP9.59□□□□□ -0.87
NPHP4-202ENST00000378161 SRD5A1P18405 259 aa9.59□□□□□ -0.87
NPHP4-202ENST00000378161 TICRRQ7Z2Z1 1910 aa9.59□□□□□ -0.87
NPHP4-202ENST00000378161 CDX4O14627 284 aaPredicted RBP9.59□□□□□ -0.88
NPHP4-202ENST00000378161 SLC25A48Q6ZT89 311 aaKnown RBP9.59□□□□□ -0.88
NPHP4-202ENST00000378161 MDP1Q86V88 176 aa9.59□□□□□ -0.88
NPHP4-202ENST00000378161 M0R1B8 84 aa9.58□□□□□ -0.88
NPHP4-202ENST00000378161 CLPSP04118 112 aa9.58□□□□□ -0.88
NPHP4-202ENST00000378161 CD3EP07766 207 aa9.58□□□□□ -0.88
NPHP4-202ENST00000378161 NUP37Q8NFH4 326 aa9.58□□□□□ -0.88
NPHP4-202ENST00000378161 TRAV13-1A0A0B4J241 112 aa9.58□□□□□ -0.88
NPHP4-202ENST00000378161 RSPO4Q2I0M5 234 aaPredicted RBP9.58□□□□□ -0.88
NPHP4-202ENST00000378161 MSRB2Q9Y3D2 182 aa9.58□□□□□ -0.88
NPHP4-202ENST00000378161 COX6A1P12074 109 aa9.58□□□□□ -0.88
NPHP4-202ENST00000378161 NPIPB3Q92617 1050 aa9.58□□□□□ -0.88
NPHP4-202ENST00000378161 LYZL4Q96KX0 146 aa9.58□□□□□ -0.88
NPHP4-202ENST00000378161 ACP1P24666 158 aa9.57□□□□□ -0.88
NPHP4-202ENST00000378161 RND1Q92730 232 aa9.57□□□□□ -0.88
NPHP4-202ENST00000378161 DIDO1Q9BTC0 2240 aaKnown RBP9.57□□□□□ -0.88
NPHP4-202ENST00000378161 NBASA2RRP1 2371 aa9.57□□□□□ -0.88
NPHP4-202ENST00000378161 TRAV17A0A0B4J275 112 aa9.57□□□□□ -0.88
NPHP4-202ENST00000378161 WIPF1O43516 503 aa9.57□□□□□ -0.88
NPHP4-202ENST00000378161 MYOD1P15172 320 aa9.57□□□□□ -0.88
NPHP4-202ENST00000378161 Q6ZS92 163 aa9.57□□□□□ -0.88
NPHP4-202ENST00000378161 C1orf210Q8IVY1 113 aa9.57□□□□□ -0.88
NPHP4-202ENST00000378161 SPRY3O43610 288 aa9.57□□□□□ -0.88
NPHP4-202ENST00000378161 CECR9P0C854 216 aa9.57□□□□□ -0.88
NPHP4-202ENST00000378161 C2orf83Q53S99 150 aa9.57□□□□□ -0.88
NPHP4-202ENST00000378161 LYPD6Q86Y78 171 aa9.57□□□□□ -0.88
NPHP4-202ENST00000378161 LGALS1P09382 135 aaKnown RBP9.56□□□□□ -0.88
NPHP4-202ENST00000378161 DKK2Q9UBU2 259 aa9.56□□□□□ -0.88
NPHP4-202ENST00000378161 PATE3B3GLJ2 98 aa9.56□□□□□ -0.88
NPHP4-202ENST00000378161 D6R8Y8 96 aa9.56□□□□□ -0.88
NPHP4-202ENST00000378161 AGFG2O95081 481 aa9.56□□□□□ -0.88
NPHP4-202ENST00000378161 C1orf195Q5TG92 126 aa9.56□□□□□ -0.88
NPHP4-202ENST00000378161 FAM168AQ92567 244 aa9.56□□□□□ -0.88
NPHP4-202ENST00000378161 PRNDQ9UKY0 176 aa9.56□□□□□ -0.88
NPHP4-202ENST00000378161 ACACAQ13085 2346 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms