RNA–Protein interactions for RNA: ENST00000376724.6

TRIM40-206, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRIM40, Length 2,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-206ENST00000376724 NUTF2P61970 127 aaKnown RBP10.07□□□□□ -0.8
TRIM40-206ENST00000376724 ELOBQ15370 118 aa10.07□□□□□ -0.8
TRIM40-206ENST00000376724 ZNF329Q86UD4 541 aa10.07□□□□□ -0.8
TRIM40-206ENST00000376724 SHANK2-AS3Q9BTD1 123 aa10.07□□□□□ -0.8
TRIM40-206ENST00000376724 GPR61Q9BZJ8 451 aa10.07□□□□□ -0.8
TRIM40-206ENST00000376724 PRRC2AP48634 2157 aaKnown RBP10.07□□□□□ -0.8
TRIM40-206ENST00000376724 H3BRN7 92 aa10.06□□□□□ -0.8
TRIM40-206ENST00000376724 HIST1H2BKO60814 126 aa10.06□□□□□ -0.8
TRIM40-206ENST00000376724 HIST1H2BJP06899 126 aa10.06□□□□□ -0.8
TRIM40-206ENST00000376724 HIST1H2BOP23527 126 aa10.06□□□□□ -0.8
TRIM40-206ENST00000376724 HIST1H2BBP33778 126 aa10.06□□□□□ -0.8
TRIM40-206ENST00000376724 HIST1H2BDP58876 126 aa10.06□□□□□ -0.8
TRIM40-206ENST00000376724 HIST1H2BCP62807 126 aa10.06□□□□□ -0.8
TRIM40-206ENST00000376724 HIST2H2BEQ16778 126 aa10.06□□□□□ -0.8
TRIM40-206ENST00000376724 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.06□□□□□ -0.8
TRIM40-206ENST00000376724 OCC1Q8TAD7 63 aa10.06□□□□□ -0.8
TRIM40-206ENST00000376724 HIST1H2BHQ93079 126 aa10.06□□□□□ -0.8
TRIM40-206ENST00000376724 HIST1H2BNQ99877 126 aa10.06□□□□□ -0.8
TRIM40-206ENST00000376724 HIST1H2BMQ99879 126 aa10.06□□□□□ -0.8
TRIM40-206ENST00000376724 CTDSP1Q9GZU7 261 aa10.06□□□□□ -0.8
TRIM40-206ENST00000376724 RPH3ALQ9UNE2 315 aa10.06□□□□□ -0.8
TRIM40-206ENST00000376724 HELZ2Q9BYK8 2649 aaKnown RBP10.06□□□□□ -0.8
TRIM40-206ENST00000376724 TGIF2-C20orf24A0A0A6YYL0 155 aa10.06□□□□□ -0.8
TRIM40-206ENST00000376724 PGPA6NDG6 321 aa10.06□□□□□ -0.8
TRIM40-206ENST00000376724 H7BYZ3 331 aa10.06□□□□□ -0.8
TRIM40-206ENST00000376724 TRGV3P03979 118 aa10.06□□□□□ -0.8
TRIM40-206ENST00000376724 IGF1P05019 195 aa10.06□□□□□ -0.8
TRIM40-206ENST00000376724 IER3P46695 156 aa10.06□□□□□ -0.8
TRIM40-206ENST00000376724 GNG5P63218 68 aa10.06□□□□□ -0.8
TRIM40-206ENST00000376724 ATP5G2Q06055 141 aa10.06□□□□□ -0.8
TRIM40-206ENST00000376724 C19orf54Q5BKX5 351 aa10.06□□□□□ -0.8
TRIM40-206ENST00000376724 EEF1AKMT3Q96AZ1 226 aa10.06□□□□□ -0.8
TRIM40-206ENST00000376724 LINC00479Q96M42 142 aa10.06□□□□□ -0.8
TRIM40-206ENST00000376724 CCDC140Q96MF4 163 aa10.06□□□□□ -0.8
TRIM40-206ENST00000376724 TMEM242Q9NWH2 141 aa10.06□□□□□ -0.8
TRIM40-206ENST00000376724 SLC25A5P05141 298 aaKnown RBP10.05□□□□□ -0.8
TRIM40-206ENST00000376724 CXCL1P09341 107 aa10.05□□□□□ -0.8
TRIM40-206ENST00000376724 GNG4P50150 75 aa10.05□□□□□ -0.8
TRIM40-206ENST00000376724 CRIP2P52943 208 aaPredicted RBP10.05□□□□□ -0.8
TRIM40-206ENST00000376724 KLK9Q2XQG4 91 aa10.05□□□□□ -0.8
TRIM40-206ENST00000376724 CENPWQ5EE01 88 aa10.05□□□□□ -0.8
TRIM40-206ENST00000376724 ZNF586Q9NXT0 402 aa10.05□□□□□ -0.8
TRIM40-206ENST00000376724 KLK9Q9UKQ9 250 aa10.05□□□□□ -0.8
TRIM40-206ENST00000376724 A8MWP6 167 aa10.04□□□□□ -0.8
TRIM40-206ENST00000376724 TPPP2P59282 170 aa10.04□□□□□ -0.8
TRIM40-206ENST00000376724 GFI1BQ5VTD9 330 aa10.04□□□□□ -0.8
TRIM40-206ENST00000376724 BPIFA4PQ86YQ2 179 aa10.04□□□□□ -0.8
TRIM40-206ENST00000376724 TMEM14CQ9P0S9 112 aa10.04□□□□□ -0.8
TRIM40-206ENST00000376724 CBY1Q9Y3M2 126 aa10.04□□□□□ -0.8
TRIM40-206ENST00000376724 TRBV7-1A0A0A6YYK4 115 aa10.04□□□□□ -0.8
TRIM40-206ENST00000376724 TRAV34A0A0B4J273 112 aa10.04□□□□□ -0.8
TRIM40-206ENST00000376724 K7EN84 100 aa10.04□□□□□ -0.8
TRIM40-206ENST00000376724 FSHBP01225 129 aa10.04□□□□□ -0.8
TRIM40-206ENST00000376724 HIST1H1EP10412 219 aaKnown RBP10.04□□□□□ -0.8
TRIM40-206ENST00000376724 RAB4AP20338 218 aa10.04□□□□□ -0.8
TRIM40-206ENST00000376724 GALR1P47211 349 aa10.04□□□□□ -0.8
TRIM40-206ENST00000376724 TMEM95Q3KNT9 176 aa10.04□□□□□ -0.8
TRIM40-206ENST00000376724 IL17RELQ6ZVW7 336 aa10.04□□□□□ -0.8
TRIM40-206ENST00000376724 OR4F17Q8NGA8 305 aa10.04□□□□□ -0.8
TRIM40-206ENST00000376724 ANAPC16Q96DE5 110 aa10.04□□□□□ -0.8
TRIM40-206ENST00000376724 C17orf77Q96MU5 243 aa10.04□□□□□ -0.8
TRIM40-206ENST00000376724 NDUFAF3Q9BU61 184 aa10.04□□□□□ -0.8
TRIM40-206ENST00000376724 Q9H3A6 140 aa10.04□□□□□ -0.8
TRIM40-206ENST00000376724 C9JCJ5 164 aa10.03□□□□□ -0.8
TRIM40-206ENST00000376724 PPP5D1E7EU14 171 aa10.03□□□□□ -0.8
TRIM40-206ENST00000376724 PEX7O00628 323 aa10.03□□□□□ -0.8
TRIM40-206ENST00000376724 FABP4P15090 132 aa10.03□□□□□ -0.8
TRIM40-206ENST00000376724 MYCNOSP40205 109 aa10.03□□□□□ -0.8
TRIM40-206ENST00000376724 OR5I1Q13606 314 aa10.03□□□□□ -0.8
TRIM40-206ENST00000376724 S100A7AQ86SG5 101 aa10.03□□□□□ -0.8
TRIM40-206ENST00000376724 SFRP2Q96HF1 295 aa10.03□□□□□ -0.8
TRIM40-206ENST00000376724 SGK494Q96LW2 274 aa10.03□□□□□ -0.8
TRIM40-206ENST00000376724 OR5B12Q96R08 314 aa10.03□□□□□ -0.8
TRIM40-206ENST00000376724 RABAC1Q9UI14 185 aa10.03□□□□□ -0.8
TRIM40-206ENST00000376724 EPDR1Q9UM22 224 aa10.03□□□□□ -0.8
TRIM40-206ENST00000376724 ZNF469Q96JG9 3925 aaPredicted RBP10.03□□□□□ -0.8
TRIM40-206ENST00000376724 FAM223BA6NKX1 122 aa10.02□□□□□ -0.8
TRIM40-206ENST00000376724 TGOLN2O43493 480 aa10.02□□□□□ -0.8
TRIM40-206ENST00000376724 PF4V1P10720 104 aa10.02□□□□□ -0.8
TRIM40-206ENST00000376724 PPIFP30405 207 aaKnown RBP10.02□□□□□ -0.8
TRIM40-206ENST00000376724 CNN1P51911 297 aaKnown RBP10.02□□□□□ -0.8
TRIM40-206ENST00000376724 PDZD11Q5EBL8 140 aa10.02□□□□□ -0.8
TRIM40-206ENST00000376724 TOMM20LQ6UXN7 152 aa10.02□□□□□ -0.8
TRIM40-206ENST00000376724 LCNL1Q6ZST4 164 aa10.02□□□□□ -0.8
TRIM40-206ENST00000376724 FAM223AQ8IWN6 122 aa10.02□□□□□ -0.8
TRIM40-206ENST00000376724 EXOC3-AS1Q8N2X6 119 aa10.02□□□□□ -0.8
TRIM40-206ENST00000376724 ARL6IP6Q8N6S5 226 aa10.02□□□□□ -0.8
TRIM40-206ENST00000376724 NHLRC2Q8NBF2 726 aa10.02□□□□□ -0.8
TRIM40-206ENST00000376724 BMPR1BO00238 502 aa10.02□□□□□ -0.81
TRIM40-206ENST00000376724 HOXA3O43365 443 aaPredicted RBP10.02□□□□□ -0.81
TRIM40-206ENST00000376724 TRGC2P03986 189 aa10.02□□□□□ -0.81
TRIM40-206ENST00000376724 PRB4P10163 310 aaPredicted RBP10.02□□□□□ -0.81
TRIM40-206ENST00000376724 MGST1P10620 155 aaKnown RBP10.02□□□□□ -0.81
TRIM40-206ENST00000376724 RPL15P61313 204 aaKnown RBP10.02□□□□□ -0.81
TRIM40-206ENST00000376724 JOSD1Q15040 202 aaPredicted RBP10.02□□□□□ -0.81
TRIM40-206ENST00000376724 Q6YL49 198 aa10.02□□□□□ -0.81
TRIM40-206ENST00000376724 PACRGQ96M98 296 aaPredicted RBP10.02□□□□□ -0.81
TRIM40-206ENST00000376724 KLK15Q9H2R5 256 aa10.02□□□□□ -0.81
TRIM40-206ENST00000376724 ISLRO14498 428 aa10.01□□□□□ -0.81
TRIM40-206ENST00000376724 IGHV3-11P01762 117 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms