RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 TMUB1Q9BVT8 246 aa11.26□□□□□ -0.61
CLCNKA-202ENST00000375692 CFAP46Q8IYW2 2715 aa11.25□□□□□ -0.61
CLCNKA-202ENST00000375692 OR2T8A6NH00 312 aa11.25□□□□□ -0.61
CLCNKA-202ENST00000375692 LRRC10Q5BKY1 277 aa11.25□□□□□ -0.61
CLCNKA-202ENST00000375692 BVES-AS1Q5T3Y7 98 aa11.25□□□□□ -0.61
CLCNKA-202ENST00000375692 SLC25A34Q6PIV7 304 aa11.25□□□□□ -0.61
CLCNKA-202ENST00000375692 EXOC3-AS1Q8N2X6 119 aa11.25□□□□□ -0.61
CLCNKA-202ENST00000375692 IGSF10Q6WRI0 2623 aa11.25□□□□□ -0.61
CLCNKA-202ENST00000375692 CRYGCP07315 174 aa11.25□□□□□ -0.61
CLCNKA-202ENST00000375692 COL8A1P27658 744 aa11.25□□□□□ -0.61
CLCNKA-202ENST00000375692 MEF2CQ06413 473 aaPredicted RBP11.25□□□□□ -0.61
CLCNKA-202ENST00000375692 PRNTQ86SH4 94 aa11.25□□□□□ -0.61
CLCNKA-202ENST00000375692 VMA21Q3ZAQ7 101 aa11.24□□□□□ -0.61
CLCNKA-202ENST00000375692 FAM162BQ5T6X4 162 aa11.24□□□□□ -0.61
CLCNKA-202ENST00000375692 CCL17Q92583 94 aa11.24□□□□□ -0.61
CLCNKA-202ENST00000375692 ZNF492Q9P255 531 aa11.24□□□□□ -0.61
CLCNKA-202ENST00000375692 A0A087X0K7 114 aa11.24□□□□□ -0.61
CLCNKA-202ENST00000375692 CT83Q5H943 113 aa11.24□□□□□ -0.61
CLCNKA-202ENST00000375692 GOLT1AQ6ZVE7 132 aa11.24□□□□□ -0.61
CLCNKA-202ENST00000375692 SMIM12Q96EX1 92 aa11.24□□□□□ -0.61
CLCNKA-202ENST00000375692 TRGV9Q99603 122 aa11.24□□□□□ -0.61
CLCNKA-202ENST00000375692 NDFIP1Q9BT67 221 aa11.24□□□□□ -0.61
CLCNKA-202ENST00000375692 TMEM191AQ9H0A3 160 aa11.24□□□□□ -0.61
CLCNKA-202ENST00000375692 C1RLQ9NZP8 487 aa11.24□□□□□ -0.61
CLCNKA-202ENST00000375692 COL12A1Q99715 3063 aa11.24□□□□□ -0.61
CLCNKA-202ENST00000375692 SNAI2O43623 268 aa11.23□□□□□ -0.61
CLCNKA-202ENST00000375692 TMEM186Q96B77 213 aa11.23□□□□□ -0.61
CLCNKA-202ENST00000375692 MAP1LC3CQ9BXW4 147 aa11.23□□□□□ -0.61
CLCNKA-202ENST00000375692 SCRT2Q9NQ03 307 aa11.23□□□□□ -0.61
CLCNKA-202ENST00000375692 EPG5Q9HCE0 2579 aa11.23□□□□□ -0.61
CLCNKA-202ENST00000375692 TRAV30A0A087WSZ9 112 aa11.23□□□□□ -0.61
CLCNKA-202ENST00000375692 ZNF785A8K8V0 405 aa11.23□□□□□ -0.61
CLCNKA-202ENST00000375692 HSBP1L1C9JCN9 74 aa11.23□□□□□ -0.61
CLCNKA-202ENST00000375692 APOHP02749 345 aaPredicted RBP11.23□□□□□ -0.61
CLCNKA-202ENST00000375692 CDKN1BP46527 198 aa11.23□□□□□ -0.61
CLCNKA-202ENST00000375692 LYZP61626 148 aa11.23□□□□□ -0.61
CLCNKA-202ENST00000375692 Q86TA4 180 aa11.23□□□□□ -0.61
CLCNKA-202ENST00000375692 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.23□□□□□ -0.61
CLCNKA-202ENST00000375692 LIPFP07098 398 aa11.23□□□□□ -0.61
CLCNKA-202ENST00000375692 PSG1P11464 419 aa11.23□□□□□ -0.61
CLCNKA-202ENST00000375692 HTR1DP28221 377 aa11.23□□□□□ -0.61
CLCNKA-202ENST00000375692 AMMECR1LQ6DCA0 310 aa11.23□□□□□ -0.61
CLCNKA-202ENST00000375692 ETFRF1Q6IPR1 90 aa11.23□□□□□ -0.61
CLCNKA-202ENST00000375692 C8orf46Q8TAG6 207 aa11.23□□□□□ -0.61
CLCNKA-202ENST00000375692 ZC2HC1AQ96GY0 325 aa11.23□□□□□ -0.61
CLCNKA-202ENST00000375692 SOX21Q9Y651 276 aaPredicted RBP11.23□□□□□ -0.61
CLCNKA-202ENST00000375692 PPIAL4EA0A075B759 164 aa11.22□□□□□ -0.61
CLCNKA-202ENST00000375692 C17orf100A8MU93 164 aa11.22□□□□□ -0.61
CLCNKA-202ENST00000375692 PPIAL4DF5H284 164 aa11.22□□□□□ -0.61
CLCNKA-202ENST00000375692 OVOL3O00110 214 aa11.22□□□□□ -0.61
CLCNKA-202ENST00000375692 IGLV2-11P01706 119 aa11.22□□□□□ -0.61
CLCNKA-202ENST00000375692 PPIAL4FP0DN26 164 aa11.22□□□□□ -0.61
CLCNKA-202ENST00000375692 TNFRSF1AP19438 455 aa11.22□□□□□ -0.61
CLCNKA-202ENST00000375692 TMEM116Q8NCL8 245 aa11.22□□□□□ -0.61
CLCNKA-202ENST00000375692 GFRA4Q9GZZ7 299 aa11.22□□□□□ -0.61
CLCNKA-202ENST00000375692 CSMD1Q96PZ7 3565 aa11.22□□□□□ -0.61
CLCNKA-202ENST00000375692 ARMS2P0C7Q2 107 aa11.22□□□□□ -0.61
CLCNKA-202ENST00000375692 RPL27AP46776 148 aaKnown RBP11.22□□□□□ -0.61
CLCNKA-202ENST00000375692 RBPJQ06330 500 aa11.22□□□□□ -0.61
CLCNKA-202ENST00000375692 ADIPOQQ15848 244 aa11.22□□□□□ -0.61
CLCNKA-202ENST00000375692 C3orf36Q3SXR2 165 aa11.22□□□□□ -0.61
CLCNKA-202ENST00000375692 DEFB125Q8N687 156 aa11.22□□□□□ -0.61
CLCNKA-202ENST00000375692 NEU4Q8WWR8 484 aaPredicted RBP11.22□□□□□ -0.61
CLCNKA-202ENST00000375692 SRSF12Q8WXF0 261 aaKnown RBP11.22□□□□□ -0.61
CLCNKA-202ENST00000375692 C17orf77Q96MU5 243 aa11.22□□□□□ -0.61
CLCNKA-202ENST00000375692 CTSZQ9UBR2 303 aa11.22□□□□□ -0.61
CLCNKA-202ENST00000375692 NPIPB6E9PJ23 425 aa11.21□□□□□ -0.61
CLCNKA-202ENST00000375692 HAX1O00165 279 aa11.21□□□□□ -0.61
CLCNKA-202ENST00000375692 NDUFB3O43676 98 aa11.21□□□□□ -0.61
CLCNKA-202ENST00000375692 WFDC8Q8IUA0 241 aa11.21□□□□□ -0.61
CLCNKA-202ENST00000375692 TEX45Q8NA69 505 aa11.21□□□□□ -0.61
CLCNKA-202ENST00000375692 HIGD1AQ9Y241 93 aa11.21□□□□□ -0.61
CLCNKA-202ENST00000375692 SPTBN1Q01082 2364 aaKnown RBP11.21□□□□□ -0.62
CLCNKA-202ENST00000375692 NCR2O95944 276 aa11.21□□□□□ -0.62
CLCNKA-202ENST00000375692 OR5AL1P0C617 328 aa11.21□□□□□ -0.62
CLCNKA-202ENST00000375692 RHOGP84095 191 aa11.21□□□□□ -0.62
CLCNKA-202ENST00000375692 CDSNQ15517 529 aa11.21□□□□□ -0.62
CLCNKA-202ENST00000375692 PET117Q6UWS5 81 aa11.21□□□□□ -0.62
CLCNKA-202ENST00000375692 TPPP3Q9BW30 176 aa11.21□□□□□ -0.62
CLCNKA-202ENST00000375692 MALRD1Q5VYJ5 2156 aa11.2□□□□□ -0.62
CLCNKA-202ENST00000375692 TMEM178BH3BS89 294 aa11.2□□□□□ -0.62
CLCNKA-202ENST00000375692 LDLRAD2Q5SZI1 272 aa11.2□□□□□ -0.62
CLCNKA-202ENST00000375692 HIVEP3Q5T1R4 2406 aa11.2□□□□□ -0.62
CLCNKA-202ENST00000375692 CCL21O00585 134 aa11.2□□□□□ -0.62
CLCNKA-202ENST00000375692 FAM106CPP0CH98 169 aa11.2□□□□□ -0.62
CLCNKA-202ENST00000375692 LOXP28300 417 aaPredicted RBP11.2□□□□□ -0.62
CLCNKA-202ENST00000375692 MC5RP33032 325 aa11.2□□□□□ -0.62
CLCNKA-202ENST00000375692 FAM106AQ4KMX7 169 aa11.2□□□□□ -0.62
CLCNKA-202ENST00000375692 ANKRD39Q53RE8 183 aa11.2□□□□□ -0.62
CLCNKA-202ENST00000375692 LINC00311Q8N616 119 aa11.2□□□□□ -0.62
CLCNKA-202ENST00000375692 VKORC1Q9BQB6 163 aa11.2□□□□□ -0.62
CLCNKA-202ENST00000375692 SLC25A39Q9BZJ4 359 aaPredicted RBP11.2□□□□□ -0.62
CLCNKA-202ENST00000375692 OTORQ9NRC9 128 aa11.2□□□□□ -0.62
CLCNKA-202ENST00000375692 HLA-DRB1P01911 266 aa11.19□□□□□ -0.62
CLCNKA-202ENST00000375692 LGALS7P47929 136 aa11.19□□□□□ -0.62
CLCNKA-202ENST00000375692 ARF6P62330 175 aa11.19□□□□□ -0.62
CLCNKA-202ENST00000375692 PVRIGQ6DKI7 326 aa11.19□□□□□ -0.62
CLCNKA-202ENST00000375692 C12orf54Q6X4T0 127 aa11.19□□□□□ -0.62
CLCNKA-202ENST00000375692 HSPB8Q9UJY1 196 aa11.19□□□□□ -0.62
CLCNKA-202ENST00000375692 A0A1B0GUT8 65 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms