RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 ZC2HC1BQ5TFG8 222 aa7.1□□□□□ -1.27
UBR4-201ENST00000375218 LCNL1Q6ZST4 164 aa7.1□□□□□ -1.27
UBR4-201ENST00000375218 SH2D6Q7Z4S9 175 aa7.1□□□□□ -1.27
UBR4-201ENST00000375218 NEURL3Q96EH8 262 aa7.1□□□□□ -1.27
UBR4-201ENST00000375218 PLA2G12AQ9BZM1 189 aa7.1□□□□□ -1.27
UBR4-201ENST00000375218 LINC01619G3V211 115 aa7.1□□□□□ -1.27
UBR4-201ENST00000375218 OPRM1P35372 400 aa7.1□□□□□ -1.27
UBR4-201ENST00000375218 Q6Q795 121 aa7.1□□□□□ -1.27
UBR4-201ENST00000375218 CLEC19AQ6UXS0 136 aa7.1□□□□□ -1.27
UBR4-201ENST00000375218 UNQ9165/PRO28630Q6UXU0 137 aa7.1□□□□□ -1.27
UBR4-201ENST00000375218 SCGB1D4Q6XE38 83 aa7.1□□□□□ -1.27
UBR4-201ENST00000375218 RNF182Q8N6D2 247 aa7.1□□□□□ -1.27
UBR4-201ENST00000375218 PRELID3AQ96N28 172 aa7.1□□□□□ -1.27
UBR4-201ENST00000375218 PMCHL2Q9BQD1 86 aa7.1□□□□□ -1.27
UBR4-201ENST00000375218 GABARAPL1Q9H0R8 117 aa7.1□□□□□ -1.27
UBR4-201ENST00000375218 MAP1AP78559 2803 aaPredicted RBP7.09□□□□□ -1.27
UBR4-201ENST00000375218 H3BMG7 143 aa7.09□□□□□ -1.27
UBR4-201ENST00000375218 SLC48A1Q6P1K1 146 aa7.09□□□□□ -1.27
UBR4-201ENST00000375218 OR5C1Q8NGR4 320 aa7.09□□□□□ -1.27
UBR4-201ENST00000375218 OR8S1Q8NH09 359 aa7.09□□□□□ -1.27
UBR4-201ENST00000375218 MUCL1Q96DR8 90 aa7.09□□□□□ -1.27
UBR4-201ENST00000375218 AMELYQ99218 206 aa7.09□□□□□ -1.27
UBR4-201ENST00000375218 CEP295Q9C0D2 2601 aa7.09□□□□□ -1.27
UBR4-201ENST00000375218 C9orf118A6NHY6 69 aa7.09□□□□□ -1.27
UBR4-201ENST00000375218 TMEM262E9PQX1 116 aa7.09□□□□□ -1.27
UBR4-201ENST00000375218 HMGA2P52926 109 aa7.09□□□□□ -1.27
UBR4-201ENST00000375218 ERVK-16P61578 105 aa7.09□□□□□ -1.27
UBR4-201ENST00000375218 DAD1P61803 113 aa7.09□□□□□ -1.27
UBR4-201ENST00000375218 DEFB123Q8N688 67 aa7.09□□□□□ -1.27
UBR4-201ENST00000375218 OTOSQ8NHW6 89 aa7.09□□□□□ -1.27
UBR4-201ENST00000375218 IGFBPL1Q8WX77 278 aa7.09□□□□□ -1.27
UBR4-201ENST00000375218 FLNCQ14315 2725 aa7.09□□□□□ -1.27
UBR4-201ENST00000375218 IGKV3D-11A0A0A0MRZ8 115 aa7.09□□□□□ -1.28
UBR4-201ENST00000375218 TRAV4A0A0B4J268 109 aa7.09□□□□□ -1.28
UBR4-201ENST00000375218 FAM229AH3BQW9 127 aa7.09□□□□□ -1.28
UBR4-201ENST00000375218 PYYP10082 97 aa7.09□□□□□ -1.28
UBR4-201ENST00000375218 PLGLB1Q02325 96 aa7.09□□□□□ -1.28
UBR4-201ENST00000375218 BVES-AS1Q5T3Y7 98 aa7.09□□□□□ -1.28
UBR4-201ENST00000375218 MORN5Q5VZ52 161 aa7.09□□□□□ -1.28
UBR4-201ENST00000375218 ZNF501Q96CX3 271 aaPredicted RBP7.09□□□□□ -1.28
UBR4-201ENST00000375218 RITA1Q96K30 269 aa7.09□□□□□ -1.28
UBR4-201ENST00000375218 LY6LH3BQJ8 138 aa7.08□□□□□ -1.28
UBR4-201ENST00000375218 K7ERJ3 54 aa7.08□□□□□ -1.28
UBR4-201ENST00000375218 UQCRQO14949 82 aa7.08□□□□□ -1.28
UBR4-201ENST00000375218 NDUFB6O95139 128 aa7.08□□□□□ -1.28
UBR4-201ENST00000375218 TMEM258P61165 79 aa7.08□□□□□ -1.28
UBR4-201ENST00000375218 COA6Q5JTJ3 125 aaKnown RBP7.08□□□□□ -1.28
UBR4-201ENST00000375218 STPG1Q5TH74 334 aa7.08□□□□□ -1.28
UBR4-201ENST00000375218 MAPKAPK5-AS1Q8N8E1 139 aa7.08□□□□□ -1.28
UBR4-201ENST00000375218 C19orf25Q9UFG5 118 aaPredicted RBP7.08□□□□□ -1.28
UBR4-201ENST00000375218 TRAV1-1A0A0B4J248 108 aa7.08□□□□□ -1.28
UBR4-201ENST00000375218 F8W1H4 67 aa7.08□□□□□ -1.28
UBR4-201ENST00000375218 H0YGG7 62 aa7.08□□□□□ -1.28
UBR4-201ENST00000375218 GABARAPL2P60520 117 aa7.08□□□□□ -1.28
UBR4-201ENST00000375218 IGLV3-21P80748 117 aaPredicted RBP7.08□□□□□ -1.28
UBR4-201ENST00000375218 Q6ZRU5 148 aa7.08□□□□□ -1.28
UBR4-201ENST00000375218 PRNTQ86SH4 94 aa7.08□□□□□ -1.28
UBR4-201ENST00000375218 C1orf174Q8IYL3 243 aa7.08□□□□□ -1.28
UBR4-201ENST00000375218 ZFHX2Q9C0A1 2572 aaPredicted RBP7.08□□□□□ -1.28
UBR4-201ENST00000375218 ZNF79Q15937 498 aa7.08□□□□□ -1.28
UBR4-201ENST00000375218 RPRMQ9NS64 109 aa7.08□□□□□ -1.28
UBR4-201ENST00000375218 URB1O60287 2271 aaKnown RBP7.07□□□□□ -1.28
UBR4-201ENST00000375218 HMSDA8MTL9 139 aa7.07□□□□□ -1.28
UBR4-201ENST00000375218 UMAD1C9J7I0 102 aa7.07□□□□□ -1.28
UBR4-201ENST00000375218 FOXI1Q12951 378 aa7.07□□□□□ -1.28
UBR4-201ENST00000375218 ELOBQ15370 118 aa7.07□□□□□ -1.28
UBR4-201ENST00000375218 DCANP1Q8TF63 244 aa7.07□□□□□ -1.28
UBR4-201ENST00000375218 TIMM17AQ99595 171 aa7.07□□□□□ -1.28
UBR4-201ENST00000375218 Q9HAA7 133 aa7.07□□□□□ -1.28
UBR4-201ENST00000375218 TRAV8-3A0A0A6YYJ7 113 aa7.07□□□□□ -1.28
UBR4-201ENST00000375218 PRR32B1ATL7 298 aa7.07□□□□□ -1.28
UBR4-201ENST00000375218 J3QRE1 110 aa7.07□□□□□ -1.28
UBR4-201ENST00000375218 FCGR3AP08637 254 aa7.07□□□□□ -1.28
UBR4-201ENST00000375218 WFDC2Q14508 124 aa7.07□□□□□ -1.28
UBR4-201ENST00000375218 ZNF491Q8N8L2 437 aa7.07□□□□□ -1.28
UBR4-201ENST00000375218 AVPP01185 164 aa7.07□□□□□ -1.28
UBR4-201ENST00000375218 MPV17LQ2QL34 196 aa7.07□□□□□ -1.28
UBR4-201ENST00000375218 DEFB133Q30KQ1 61 aa7.07□□□□□ -1.28
UBR4-201ENST00000375218 C16orf47Q6ZP98 133 aaPredicted RBP7.07□□□□□ -1.28
UBR4-201ENST00000375218 C11orf53Q8IXP5 236 aa7.07□□□□□ -1.28
UBR4-201ENST00000375218 CCL17Q92583 94 aa7.07□□□□□ -1.28
UBR4-201ENST00000375218 CHCHD5Q9BSY4 110 aa7.07□□□□□ -1.28
UBR4-201ENST00000375218 V9GYH0 126 aa7.07□□□□□ -1.28
UBR4-201ENST00000375218 WI2-2373I1.2A0A1W2PRP0 233 aa7.06□□□□□ -1.28
UBR4-201ENST00000375218 DIRC3C9JPN6 131 aa7.06□□□□□ -1.28
UBR4-201ENST00000375218 DUSP14O95147 198 aaKnown RBP7.06□□□□□ -1.28
UBR4-201ENST00000375218 TNFP01375 233 aa7.06□□□□□ -1.28
UBR4-201ENST00000375218 COL10A1Q03692 680 aa7.06□□□□□ -1.28
UBR4-201ENST00000375218 CKLFQ9UBR5 152 aa7.06□□□□□ -1.28
UBR4-201ENST00000375218 SOCS1O15524 211 aa7.06□□□□□ -1.28
UBR4-201ENST00000375218 SRSF9Q13242 221 aaKnown RBP eCLIP7.06□□□□□ -1.28
UBR4-201ENST00000375218 RFLNBQ8N5W9 214 aa7.06□□□□□ -1.28
UBR4-201ENST00000375218 OR52N5Q8NH56 324 aa7.06□□□□□ -1.28
UBR4-201ENST00000375218 LSM10Q969L4 123 aaKnown RBP7.06□□□□□ -1.28
UBR4-201ENST00000375218 CACNA1GO43497 2377 aa7.06□□□□□ -1.28
UBR4-201ENST00000375218 HMGN2P05204 90 aaKnown RBP7.06□□□□□ -1.28
UBR4-201ENST00000375218 WDR38Q5JTN6 314 aa7.06□□□□□ -1.28
UBR4-201ENST00000375218 LINC00114Q6XXX2 140 aa7.06□□□□□ -1.28
UBR4-201ENST00000375218 MGST3O14880 152 aa7.05□□□□□ -1.28
UBR4-201ENST00000375218 IGKV3-11P04433 115 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms