RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 ASCL2Q99929 193 aa8.37□□□□□ -1.07
HLA-DQA1-202ENST00000374949 MCRIP2Q9BUT9 160 aaKnown RBP8.37□□□□□ -1.07
HLA-DQA1-202ENST00000374949 PUS1Q9Y606 427 aaKnown RBP eCLIP8.37□□□□□ -1.07
HLA-DQA1-202ENST00000374949 EPPK1P58107 5090 aaKnown RBP8.37□□□□□ -1.07
HLA-DQA1-202ENST00000374949 TENM2Q9NT68 2774 aa8.36□□□□□ -1.07
HLA-DQA1-202ENST00000374949 TRAV5A0A0B4J249 113 aa8.36□□□□□ -1.07
HLA-DQA1-202ENST00000374949 ANKRD34BA5PLL1 514 aa8.36□□□□□ -1.07
HLA-DQA1-202ENST00000374949 PPP5D1E7EU14 171 aa8.36□□□□□ -1.07
HLA-DQA1-202ENST00000374949 ATP6V1G1O75348 118 aa8.36□□□□□ -1.07
HLA-DQA1-202ENST00000374949 IFNA1P01562 189 aa8.36□□□□□ -1.07
HLA-DQA1-202ENST00000374949 NHLRC4P0CG21 123 aaPredicted RBP8.36□□□□□ -1.07
HLA-DQA1-202ENST00000374949 PSMB3P49720 205 aa8.36□□□□□ -1.07
HLA-DQA1-202ENST00000374949 KHDC3LQ587J8 217 aa8.36□□□□□ -1.07
HLA-DQA1-202ENST00000374949 IQCF2Q8IXL9 164 aa8.36□□□□□ -1.07
HLA-DQA1-202ENST00000374949 STXBP6Q8NFX7 210 aa8.36□□□□□ -1.07
HLA-DQA1-202ENST00000374949 UBE2E2Q96LR5 201 aa8.36□□□□□ -1.07
HLA-DQA1-202ENST00000374949 EIF5A2Q9GZV4 153 aaKnown RBP8.36□□□□□ -1.07
HLA-DQA1-202ENST00000374949 TMPRSS5Q9H3S3 457 aa8.36□□□□□ -1.07
HLA-DQA1-202ENST00000374949 PEF1Q9UBV8 284 aaKnown RBP8.36□□□□□ -1.07
HLA-DQA1-202ENST00000374949 BIRC6Q9NR09 4857 aa8.36□□□□□ -1.07
HLA-DQA1-202ENST00000374949 DYNC2H1Q8NCM8 4307 aaKnown RBP8.35□□□□□ -1.07
HLA-DQA1-202ENST00000374949 C3orf84H3BNL1 204 aa8.35□□□□□ -1.07
HLA-DQA1-202ENST00000374949 BMPR1BO00238 502 aa8.35□□□□□ -1.07
HLA-DQA1-202ENST00000374949 GGCTO75223 188 aaKnown RBP8.35□□□□□ -1.07
HLA-DQA1-202ENST00000374949 ARL14EPLP0DKL9 152 aa8.35□□□□□ -1.07
HLA-DQA1-202ENST00000374949 GCHFRP30047 84 aa8.35□□□□□ -1.07
HLA-DQA1-202ENST00000374949 MYCNOSP40205 109 aa8.35□□□□□ -1.07
HLA-DQA1-202ENST00000374949 HAGHQ16775 308 aa8.35□□□□□ -1.07
HLA-DQA1-202ENST00000374949 DEFB136Q30KP8 78 aa8.35□□□□□ -1.07
HLA-DQA1-202ENST00000374949 TOMM20LQ6UXN7 152 aa8.35□□□□□ -1.07
HLA-DQA1-202ENST00000374949 PQLC2Q6ZP29 291 aa8.35□□□□□ -1.07
HLA-DQA1-202ENST00000374949 MYOZ3Q8TDC0 251 aa8.35□□□□□ -1.07
HLA-DQA1-202ENST00000374949 RAX2Q96IS3 184 aa8.35□□□□□ -1.07
HLA-DQA1-202ENST00000374949 UHRF2Q96PU4 802 aa8.35□□□□□ -1.07
HLA-DQA1-202ENST00000374949 SLC25A2Q9BXI2 301 aa8.35□□□□□ -1.07
HLA-DQA1-202ENST00000374949 SLC25A39Q9BZJ4 359 aaPredicted RBP8.35□□□□□ -1.07
HLA-DQA1-202ENST00000374949 SMDT1Q9H4I9 107 aa8.35□□□□□ -1.07
HLA-DQA1-202ENST00000374949 TREM1Q9NP99 234 aa8.35□□□□□ -1.07
HLA-DQA1-202ENST00000374949 GNG13Q9P2W3 67 aa8.35□□□□□ -1.07
HLA-DQA1-202ENST00000374949 RABAC1Q9UI14 185 aa8.35□□□□□ -1.07
HLA-DQA1-202ENST00000374949 RNF24Q9Y225 148 aa8.35□□□□□ -1.07
HLA-DQA1-202ENST00000374949 IGHV3-35A0A0C4DH35 117 aa8.34□□□□□ -1.07
HLA-DQA1-202ENST00000374949 NDUFA4O00483 81 aa8.34□□□□□ -1.07
HLA-DQA1-202ENST00000374949 OR7C2O60412 319 aa8.34□□□□□ -1.07
HLA-DQA1-202ENST00000374949 CD5P06127 495 aa8.34□□□□□ -1.07
HLA-DQA1-202ENST00000374949 S100A1P23297 94 aa8.34□□□□□ -1.07
HLA-DQA1-202ENST00000374949 TAGLN2P37802 199 aaKnown RBP8.34□□□□□ -1.07
HLA-DQA1-202ENST00000374949 CDX1P47902 265 aaPredicted RBP8.34□□□□□ -1.07
HLA-DQA1-202ENST00000374949 SRSF3P84103 164 aaKnown RBP8.34□□□□□ -1.07
HLA-DQA1-202ENST00000374949 USF2Q15853 346 aaPredicted RBP8.34□□□□□ -1.07
HLA-DQA1-202ENST00000374949 TOR2AQ5JU69 321 aa8.34□□□□□ -1.07
HLA-DQA1-202ENST00000374949 ZNF506Q5JVG8 444 aa8.34□□□□□ -1.07
HLA-DQA1-202ENST00000374949 MORN5Q5VZ52 161 aa8.34□□□□□ -1.07
HLA-DQA1-202ENST00000374949 ZNF414Q96IQ9 312 aa8.34□□□□□ -1.07
HLA-DQA1-202ENST00000374949 FAM167A-AS1Q96KT0 104 aa8.34□□□□□ -1.07
HLA-DQA1-202ENST00000374949 OR5B12Q96R08 314 aa8.34□□□□□ -1.07
HLA-DQA1-202ENST00000374949 RARRES2Q99969 163 aa8.34□□□□□ -1.07
HLA-DQA1-202ENST00000374949 SHANK2-AS3Q9BTD1 123 aa8.34□□□□□ -1.07
HLA-DQA1-202ENST00000374949 PAXXQ9BUH6 204 aa8.34□□□□□ -1.07
HLA-DQA1-202ENST00000374949 SCRT1Q9BWW7 348 aa8.34□□□□□ -1.07
HLA-DQA1-202ENST00000374949 OR51M1Q9H341 326 aa8.34□□□□□ -1.07
HLA-DQA1-202ENST00000374949 MANBALQ9NQG1 85 aa8.34□□□□□ -1.07
HLA-DQA1-202ENST00000374949 TMEM167BQ9NRX6 74 aa8.34□□□□□ -1.07
HLA-DQA1-202ENST00000374949 LOC102723971A0A1B0GUV8 181 aa8.33□□□□□ -1.08
HLA-DQA1-202ENST00000374949 H3BRN7 92 aa8.33□□□□□ -1.08
HLA-DQA1-202ENST00000374949 TRBV12-3P01733 135 aa8.33□□□□□ -1.08
HLA-DQA1-202ENST00000374949 LGALS1P09382 135 aaKnown RBP8.33□□□□□ -1.08
HLA-DQA1-202ENST00000374949 BCL2P10415 239 aa8.33□□□□□ -1.08
HLA-DQA1-202ENST00000374949 ICAM4Q14773 271 aa8.33□□□□□ -1.08
HLA-DQA1-202ENST00000374949 FAM106AQ4KMX7 169 aa8.33□□□□□ -1.08
HLA-DQA1-202ENST00000374949 SUN5Q8TC36 379 aa8.33□□□□□ -1.08
HLA-DQA1-202ENST00000374949 ZNF503Q96F45 646 aa8.33□□□□□ -1.08
HLA-DQA1-202ENST00000374949 TMEM231Q9H6L2 316 aa8.33□□□□□ -1.08
HLA-DQA1-202ENST00000374949 ZFAND3Q9H8U3 227 aa8.33□□□□□ -1.08
HLA-DQA1-202ENST00000374949 ZMAT5Q9UDW3 170 aaKnown RBP8.33□□□□□ -1.08
HLA-DQA1-202ENST00000374949 VAX2Q9UIW0 290 aa8.33□□□□□ -1.08
HLA-DQA1-202ENST00000374949 ZNF98A6NK75 572 aa8.32□□□□□ -1.08
HLA-DQA1-202ENST00000374949 I3L521 148 aa8.32□□□□□ -1.08
HLA-DQA1-202ENST00000374949 CCL24O00175 119 aa8.32□□□□□ -1.08
HLA-DQA1-202ENST00000374949 PAGE4O60829 102 aa8.32□□□□□ -1.08
HLA-DQA1-202ENST00000374949 HSPB1P04792 205 aaKnown RBP8.32□□□□□ -1.08
HLA-DQA1-202ENST00000374949 NPPCP23582 126 aa8.32□□□□□ -1.08
HLA-DQA1-202ENST00000374949 BPIFA4PQ86YQ2 179 aa8.32□□□□□ -1.08
HLA-DQA1-202ENST00000374949 GPHB5Q86YW7 130 aa8.32□□□□□ -1.08
HLA-DQA1-202ENST00000374949 RXFP4Q8TDU9 374 aa8.32□□□□□ -1.08
HLA-DQA1-202ENST00000374949 NARS2Q96I59 477 aaKnown RBP8.32□□□□□ -1.08
HLA-DQA1-202ENST00000374949 METTL26Q96S19 204 aa8.32□□□□□ -1.08
HLA-DQA1-202ENST00000374949 TMEM14CQ9P0S9 112 aa8.32□□□□□ -1.08
HLA-DQA1-202ENST00000374949 TMEM218A2RU14 115 aa8.31□□□□□ -1.08
HLA-DQA1-202ENST00000374949 KRBOX1C9JBD0 128 aa8.31□□□□□ -1.08
HLA-DQA1-202ENST00000374949 C9JQL5 133 aa8.31□□□□□ -1.08
HLA-DQA1-202ENST00000374949 NDUFS6O75380 124 aaKnown RBP8.31□□□□□ -1.08
HLA-DQA1-202ENST00000374949 OR10J4P0C629 311 aa8.31□□□□□ -1.08
HLA-DQA1-202ENST00000374949 CASC10Q5T4H9 136 aa8.31□□□□□ -1.08
HLA-DQA1-202ENST00000374949 C9orf66Q5T8R8 295 aa8.31□□□□□ -1.08
HLA-DQA1-202ENST00000374949 CST9LP1Q5W188 147 aa8.31□□□□□ -1.08
HLA-DQA1-202ENST00000374949 LEMD1Q68G75 181 aa8.31□□□□□ -1.08
HLA-DQA1-202ENST00000374949 MUC7Q8TAX7 377 aa8.31□□□□□ -1.08
HLA-DQA1-202ENST00000374949 FXYD5Q96DB9 178 aa8.31□□□□□ -1.08
HLA-DQA1-202ENST00000374949 TXNDC17Q9BRA2 123 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms