RNA–Protein interactions for RNA: ENST00000374180.3

HDHD3-202, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-202ENST00000374180 COX7A2P2O60397 106 aa11.86□□□□□ -0.51
HDHD3-202ENST00000374180 RPL29P47914 159 aaKnown RBP11.86□□□□□ -0.51
HDHD3-202ENST00000374180 DEFB131AP59861 70 aa11.86□□□□□ -0.51
HDHD3-202ENST00000374180 LGALSLQ3ZCW2 172 aaPredicted RBP11.86□□□□□ -0.51
HDHD3-202ENST00000374180 MIC13Q5XKP0 118 aa11.86□□□□□ -0.51
HDHD3-202ENST00000374180 LEMD1Q68G75 181 aa11.86□□□□□ -0.51
HDHD3-202ENST00000374180 PATE2Q6UY27 113 aa11.86□□□□□ -0.51
HDHD3-202ENST00000374180 GPR82Q96P67 336 aa11.86□□□□□ -0.51
HDHD3-202ENST00000374180 UHRF2Q96PU4 802 aa11.86□□□□□ -0.51
HDHD3-202ENST00000374180 ATP5SQ99766 215 aa11.86□□□□□ -0.51
HDHD3-202ENST00000374180 SHANK2-AS3Q9BTD1 123 aa11.86□□□□□ -0.51
HDHD3-202ENST00000374180 SCRT1Q9BWW7 348 aa11.86□□□□□ -0.51
HDHD3-202ENST00000374180 ELOA3CA0A087WX78 387 aaPredicted RBP11.85□□□□□ -0.51
HDHD3-202ENST00000374180 LOC102724200A0A096LPH7 203 aaPredicted RBP11.85□□□□□ -0.51
HDHD3-202ENST00000374180 ZNF688P0C7X2 276 aa11.85□□□□□ -0.51
HDHD3-202ENST00000374180 GALR1P47211 349 aa11.85□□□□□ -0.51
HDHD3-202ENST00000374180 PRR20EP86478 221 aa11.85□□□□□ -0.51
HDHD3-202ENST00000374180 PRR20CP86479 221 aa11.85□□□□□ -0.51
HDHD3-202ENST00000374180 PRR20DP86480 221 aa11.85□□□□□ -0.51
HDHD3-202ENST00000374180 PRR20BP86481 221 aa11.85□□□□□ -0.51
HDHD3-202ENST00000374180 PRR20AP86496 221 aa11.85□□□□□ -0.51
HDHD3-202ENST00000374180 OPCMLQ14982 345 aa11.85□□□□□ -0.51
HDHD3-202ENST00000374180 ZNF124Q15973 351 aa11.85□□□□□ -0.51
HDHD3-202ENST00000374180 ZNF680Q8NEM1 530 aa11.85□□□□□ -0.51
HDHD3-202ENST00000374180 SLC25A32Q9H2D1 315 aa11.85□□□□□ -0.51
HDHD3-202ENST00000374180 DNAJC4Q9NNZ3 241 aa11.85□□□□□ -0.51
HDHD3-202ENST00000374180 RNF24Q9Y225 148 aa11.85□□□□□ -0.51
HDHD3-202ENST00000374180 LINC00862A6NCI5 91 aa11.84□□□□□ -0.51
HDHD3-202ENST00000374180 HMSDA8MTL9 139 aa11.84□□□□□ -0.51
HDHD3-202ENST00000374180 RAB14P61106 215 aa11.84□□□□□ -0.51
HDHD3-202ENST00000374180 B2MP61769 119 aa11.84□□□□□ -0.51
HDHD3-202ENST00000374180 SNRPD3P62318 126 aaKnown RBP11.84□□□□□ -0.51
HDHD3-202ENST00000374180 LINC00305Q7Z4B0 112 aa11.84□□□□□ -0.51
HDHD3-202ENST00000374180 ZNF709Q8N972 641 aa11.84□□□□□ -0.51
HDHD3-202ENST00000374180 TMEM37Q8WXS4 190 aa11.84□□□□□ -0.51
HDHD3-202ENST00000374180 RSG1Q9BU20 258 aa11.84□□□□□ -0.51
HDHD3-202ENST00000374180 NPCDR1Q9BY65 106 aa11.84□□□□□ -0.51
HDHD3-202ENST00000374180 SMIM3Q9BZL3 60 aa11.84□□□□□ -0.51
HDHD3-202ENST00000374180 WDR61Q9GZS3 305 aaKnown RBP11.84□□□□□ -0.51
HDHD3-202ENST00000374180 ZMAT4Q9H898 229 aa11.84□□□□□ -0.51
HDHD3-202ENST00000374180 SLC39A9Q9NUM3 307 aa11.84□□□□□ -0.51
HDHD3-202ENST00000374180 PXMP4Q9Y6I8 212 aa11.84□□□□□ -0.51
HDHD3-202ENST00000374180 C10orf113Q5VZT2 155 aa11.83□□□□□ -0.52
HDHD3-202ENST00000374180 OR1L4Q8NGR5 311 aa11.83□□□□□ -0.52
HDHD3-202ENST00000374180 SEPSECSQ9HD40 501 aaKnown RBP11.83□□□□□ -0.52
HDHD3-202ENST00000374180 G3V3Q6 166 aa11.83□□□□□ -0.52
HDHD3-202ENST00000374180 IFNA5P01569 189 aa11.83□□□□□ -0.52
HDHD3-202ENST00000374180 RPL7P18124 248 aaKnown RBP11.83□□□□□ -0.52
HDHD3-202ENST00000374180 ID1P41134 155 aa11.83□□□□□ -0.52
HDHD3-202ENST00000374180 PSMG4Q5JS54 123 aa11.83□□□□□ -0.52
HDHD3-202ENST00000374180 CLLU1Q5K131 121 aa11.83□□□□□ -0.52
HDHD3-202ENST00000374180 SCGB1C1Q8TD33 95 aa11.83□□□□□ -0.52
HDHD3-202ENST00000374180 PFDN5Q99471 154 aa11.83□□□□□ -0.52
HDHD3-202ENST00000374180 TM2D3Q9BRN9 247 aa11.83□□□□□ -0.52
HDHD3-202ENST00000374180 RPL35AP18077 110 aaKnown RBP11.82□□□□□ -0.52
HDHD3-202ENST00000374180 MEOX2P50222 304 aa11.82□□□□□ -0.52
HDHD3-202ENST00000374180 SAMD13Q5VXD3 122 aa11.82□□□□□ -0.52
HDHD3-202ENST00000374180 INO80EQ8NBZ0 244 aaPredicted RBP11.82□□□□□ -0.52
HDHD3-202ENST00000374180 AQP10Q96PS8 301 aa11.82□□□□□ -0.52
HDHD3-202ENST00000374180 U3KQK5 164 aa11.82□□□□□ -0.52
HDHD3-202ENST00000374180 FXYD6-FXYD2A0A087WZ82 144 aa11.81□□□□□ -0.52
HDHD3-202ENST00000374180 C17orf112F2Z3M2 114 aa11.81□□□□□ -0.52
HDHD3-202ENST00000374180 ATF4P18848 351 aaPredicted RBP11.81□□□□□ -0.52
HDHD3-202ENST00000374180 APOC4P55056 127 aa11.81□□□□□ -0.52
HDHD3-202ENST00000374180 LINC00052Q96N35 136 aa11.81□□□□□ -0.52
HDHD3-202ENST00000374180 SPATA25Q9BR10 227 aa11.81□□□□□ -0.52
HDHD3-202ENST00000374180 WFDC1Q9HC57 220 aa11.81□□□□□ -0.52
HDHD3-202ENST00000374180 KCNIP2Q9NS61 270 aa11.81□□□□□ -0.52
HDHD3-202ENST00000374180 HUWE1Q7Z6Z7 4374 aaKnown RBP11.8□□□□□ -0.52
HDHD3-202ENST00000374180 STAB2Q8WWQ8 2551 aa11.8□□□□□ -0.52
HDHD3-202ENST00000374180 ISLRO14498 428 aa11.8□□□□□ -0.52
HDHD3-202ENST00000374180 PSMB3P49720 205 aa11.8□□□□□ -0.52
HDHD3-202ENST00000374180 STHQ8IWL8 128 aa11.8□□□□□ -0.52
HDHD3-202ENST00000374180 GATAD1Q8WUU5 269 aa11.8□□□□□ -0.52
HDHD3-202ENST00000374180 C16orf92Q96LL3 132 aa11.8□□□□□ -0.52
HDHD3-202ENST00000374180 TENM3Q9P273 2699 aa11.8□□□□□ -0.52
HDHD3-202ENST00000374180 KIR2DL5BA0A0G2JN68 375 aa11.79□□□□□ -0.52
HDHD3-202ENST00000374180 KIR2DL5BA0A0G2JPC4 375 aa11.79□□□□□ -0.52
HDHD3-202ENST00000374180 KNCNA6PVL3 124 aa11.79□□□□□ -0.52
HDHD3-202ENST00000374180 SOCS3O14543 225 aa11.79□□□□□ -0.52
HDHD3-202ENST00000374180 MORN5Q5VZ52 161 aa11.79□□□□□ -0.52
HDHD3-202ENST00000374180 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.79□□□□□ -0.52
HDHD3-202ENST00000374180 BPIFA4PQ86YQ2 179 aa11.79□□□□□ -0.52
HDHD3-202ENST00000374180 KIR2DL5AQ8N109 375 aa11.79□□□□□ -0.52
HDHD3-202ENST00000374180 KIR2DL5BQ8NHK3 375 aa11.79□□□□□ -0.52
HDHD3-202ENST00000374180 C17orf77Q96MU5 243 aa11.79□□□□□ -0.52
HDHD3-202ENST00000374180 RCHY1Q96PM5 261 aa11.79□□□□□ -0.52
HDHD3-202ENST00000374180 TNFSF18Q9UNG2 199 aa11.79□□□□□ -0.52
HDHD3-202ENST00000374180 UBE2CO00762 179 aa11.78□□□□□ -0.52
HDHD3-202ENST00000374180 ACTL10Q5JWF8 245 aa11.78□□□□□ -0.52
HDHD3-202ENST00000374180 PARD6GQ9BYG4 376 aaPredicted RBP11.78□□□□□ -0.52
HDHD3-202ENST00000374180 CSTL1Q9H114 145 aa11.78□□□□□ -0.52
HDHD3-202ENST00000374180 TRAV5A0A0B4J249 113 aa11.77□□□□□ -0.52
HDHD3-202ENST00000374180 CXCL2P19875 107 aa11.77□□□□□ -0.52
HDHD3-202ENST00000374180 ZNF266Q14584 549 aa11.77□□□□□ -0.52
HDHD3-202ENST00000374180 GCSAMLQ5JQS6 135 aa11.77□□□□□ -0.52
HDHD3-202ENST00000374180 LRRC20Q8TCA0 184 aa11.77□□□□□ -0.52
HDHD3-202ENST00000374180 A0A087X0K7 114 aa11.76□□□□□ -0.53
HDHD3-202ENST00000374180 MRPS12O15235 138 aaKnown RBP11.76□□□□□ -0.53
HDHD3-202ENST00000374180 FAM78BQ5VT40 261 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms