RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 TOMM20LQ6UXN7 152 aa6.85□□□□□ -1.31
SNRNP40-202ENST00000373720 CIARTQ8N365 385 aaPredicted RBP6.85□□□□□ -1.31
SNRNP40-202ENST00000373720 ZNF502Q8TBZ5 544 aa6.85□□□□□ -1.31
SNRNP40-202ENST00000373720 HIST1H2BLQ99880 126 aa6.85□□□□□ -1.31
SNRNP40-202ENST00000373720 RPP21Q9H633 154 aaKnown RBP6.85□□□□□ -1.31
SNRNP40-202ENST00000373720 NIT2Q9NQR4 276 aa6.85□□□□□ -1.31
SNRNP40-202ENST00000373720 FBXL7Q9UJT9 491 aa6.85□□□□□ -1.31
SNRNP40-202ENST00000373720 ATMQ13315 3056 aa6.85□□□□□ -1.31
SNRNP40-202ENST00000373720 C19orf71A6NCJ1 209 aa6.84□□□□□ -1.31
SNRNP40-202ENST00000373720 MRPS12O15235 138 aaKnown RBP6.84□□□□□ -1.31
SNRNP40-202ENST00000373720 OR2J3O76001 311 aa6.84□□□□□ -1.31
SNRNP40-202ENST00000373720 CTSGP08311 255 aa6.84□□□□□ -1.31
SNRNP40-202ENST00000373720 BMI1P35226 326 aa6.84□□□□□ -1.31
SNRNP40-202ENST00000373720 UQCRFS1P47985 274 aa6.84□□□□□ -1.31
SNRNP40-202ENST00000373720 TPPP2P59282 170 aa6.84□□□□□ -1.31
SNRNP40-202ENST00000373720 KLRD1Q13241 179 aa6.84□□□□□ -1.31
SNRNP40-202ENST00000373720 ASPHD1Q5U4P2 390 aa6.84□□□□□ -1.31
SNRNP40-202ENST00000373720 UNQ5815/PRO19632Q6UWF5 114 aa6.84□□□□□ -1.31
SNRNP40-202ENST00000373720 RBPMS2Q6ZRY4 209 aaKnown RBP6.84□□□□□ -1.31
SNRNP40-202ENST00000373720 GBGT1Q8N5D6 347 aa6.84□□□□□ -1.31
SNRNP40-202ENST00000373720 C5orf56Q8N8D9 126 aa6.84□□□□□ -1.31
SNRNP40-202ENST00000373720 NUDT10Q8NFP7 164 aa6.84□□□□□ -1.31
SNRNP40-202ENST00000373720 NUDT11Q96G61 164 aa6.84□□□□□ -1.31
SNRNP40-202ENST00000373720 ZNF414Q96IQ9 312 aa6.84□□□□□ -1.31
SNRNP40-202ENST00000373720 GPR61Q9BZJ8 451 aa6.84□□□□□ -1.31
SNRNP40-202ENST00000373720 MRPL18Q9H0U6 180 aaKnown RBP6.84□□□□□ -1.31
SNRNP40-202ENST00000373720 C7orf69Q9H7B7 122 aa6.84□□□□□ -1.31
SNRNP40-202ENST00000373720 SERTAD4Q9NUC0 356 aa6.84□□□□□ -1.31
SNRNP40-202ENST00000373720 BEX4Q9NWD9 120 aaPredicted RBP6.84□□□□□ -1.31
SNRNP40-202ENST00000373720 PPP1R14DQ9NXH3 145 aa6.84□□□□□ -1.31
SNRNP40-202ENST00000373720 ZNF586Q9NXT0 402 aa6.84□□□□□ -1.31
SNRNP40-202ENST00000373720 A8MWP6 167 aa6.83□□□□□ -1.32
SNRNP40-202ENST00000373720 SNURFLB1AK76 121 aa6.83□□□□□ -1.32
SNRNP40-202ENST00000373720 TSTD3H0UI37 97 aa6.83□□□□□ -1.32
SNRNP40-202ENST00000373720 C19orf84I3L1E1 186 aa6.83□□□□□ -1.32
SNRNP40-202ENST00000373720 EGR2P11161 476 aaPredicted RBP6.83□□□□□ -1.32
SNRNP40-202ENST00000373720 COX6B1P14854 86 aa6.83□□□□□ -1.32
SNRNP40-202ENST00000373720 PMCHP20382 165 aa6.83□□□□□ -1.32
SNRNP40-202ENST00000373720 ATP5G2Q06055 141 aa6.83□□□□□ -1.32
SNRNP40-202ENST00000373720 OR5I1Q13606 314 aa6.83□□□□□ -1.32
SNRNP40-202ENST00000373720 PSG3Q16557 428 aa6.83□□□□□ -1.32
SNRNP40-202ENST00000373720 MORN5Q5VZ52 161 aa6.83□□□□□ -1.32
SNRNP40-202ENST00000373720 C16orf54Q6UWD8 224 aa6.83□□□□□ -1.32
SNRNP40-202ENST00000373720 SIGLEC15Q6ZMC9 328 aa6.83□□□□□ -1.32
SNRNP40-202ENST00000373720 OR8I2Q8N0Y5 310 aa6.83□□□□□ -1.32
SNRNP40-202ENST00000373720 OR10D4PQ8NGN7 298 aa6.83□□□□□ -1.32
SNRNP40-202ENST00000373720 BLNKQ8WV28 456 aa6.83□□□□□ -1.32
SNRNP40-202ENST00000373720 BORCS7Q96B45 105 aa6.83□□□□□ -1.32
SNRNP40-202ENST00000373720 NOL4LQ96MY1 436 aaPredicted RBP6.83□□□□□ -1.32
SNRNP40-202ENST00000373720 NDFIP1Q9BT67 221 aa6.83□□□□□ -1.32
SNRNP40-202ENST00000373720 LENEPQ9Y5L5 61 aa6.83□□□□□ -1.32
SNRNP40-202ENST00000373720 SPENQ96T58 3664 aaKnown RBP6.83□□□□□ -1.32
SNRNP40-202ENST00000373720 TRAV41A0A0B4J266 112 aa6.82□□□□□ -1.32
SNRNP40-202ENST00000373720 A0A1W2PS18 150 aa6.82□□□□□ -1.32
SNRNP40-202ENST00000373720 PGPEP1LA6NFU8 196 aa6.82□□□□□ -1.32
SNRNP40-202ENST00000373720 DIRC3C9JPN6 131 aa6.82□□□□□ -1.32
SNRNP40-202ENST00000373720 IGHG2P01859 326 aa6.82□□□□□ -1.32
SNRNP40-202ENST00000373720 APCSP02743 223 aa6.82□□□□□ -1.32
SNRNP40-202ENST00000373720 FABP4P15090 132 aa6.82□□□□□ -1.32
SNRNP40-202ENST00000373720 HBBP68871 147 aa6.82□□□□□ -1.32
SNRNP40-202ENST00000373720 LOXL1Q08397 574 aaPredicted RBP6.82□□□□□ -1.32
SNRNP40-202ENST00000373720 KLF5Q13887 457 aaPredicted RBP6.82□□□□□ -1.32
SNRNP40-202ENST00000373720 LBHQ53QV2 105 aaPredicted RBP6.82□□□□□ -1.32
SNRNP40-202ENST00000373720 PRSS57Q6UWY2 283 aa6.82□□□□□ -1.32
SNRNP40-202ENST00000373720 TMEM136Q6ZRR5 245 aa6.82□□□□□ -1.32
SNRNP40-202ENST00000373720 C19orf35Q6ZS72 473 aa6.82□□□□□ -1.32
SNRNP40-202ENST00000373720 Q86TA4 180 aa6.82□□□□□ -1.32
SNRNP40-202ENST00000373720 LINC01356Q8N9X3 169 aa6.82□□□□□ -1.32
SNRNP40-202ENST00000373720 GATD1Q8NB37 220 aa6.82□□□□□ -1.32
SNRNP40-202ENST00000373720 METTL26Q96S19 204 aa6.82□□□□□ -1.32
SNRNP40-202ENST00000373720 RNASE7Q9H1E1 156 aaKnown RBP6.82□□□□□ -1.32
SNRNP40-202ENST00000373720 ABCA4P78363 2273 aa6.81□□□□□ -1.32
SNRNP40-202ENST00000373720 TRBV7-9A0A0J9YWB2 115 aa6.81□□□□□ -1.32
SNRNP40-202ENST00000373720 F8W735 103 aaPredicted RBP6.81□□□□□ -1.32
SNRNP40-202ENST00000373720 SLC17A3O00476 420 aa6.81□□□□□ -1.32
SNRNP40-202ENST00000373720 NDUFA4O00483 81 aa6.81□□□□□ -1.32
SNRNP40-202ENST00000373720 NDUFS7O75251 213 aa6.81□□□□□ -1.32
SNRNP40-202ENST00000373720 AMBPP02760 352 aa6.81□□□□□ -1.32
SNRNP40-202ENST00000373720 IER3P46695 156 aa6.81□□□□□ -1.32
SNRNP40-202ENST00000373720 PKIAP61925 76 aa6.81□□□□□ -1.32
SNRNP40-202ENST00000373720 RHOGP84095 191 aa6.81□□□□□ -1.32
SNRNP40-202ENST00000373720 RIGQ13278 110 aa6.81□□□□□ -1.32
SNRNP40-202ENST00000373720 C15orf32Q32M92 178 aa6.81□□□□□ -1.32
SNRNP40-202ENST00000373720 C19orf54Q5BKX5 351 aa6.81□□□□□ -1.32
SNRNP40-202ENST00000373720 PYY3Q5JQD4 70 aa6.81□□□□□ -1.32
SNRNP40-202ENST00000373720 BAGE3Q86Y29 109 aa6.81□□□□□ -1.32
SNRNP40-202ENST00000373720 KRTAP1-3Q8IUG1 177 aa6.81□□□□□ -1.32
SNRNP40-202ENST00000373720 DYNAPQ8N1N2 210 aa6.81□□□□□ -1.32
SNRNP40-202ENST00000373720 NHLRC2Q8NBF2 726 aa6.81□□□□□ -1.32
SNRNP40-202ENST00000373720 PSG8Q9UQ74 426 aa6.81□□□□□ -1.32
SNRNP40-202ENST00000373720 SPTBN4Q9H254 2564 aa6.81□□□□□ -1.32
SNRNP40-202ENST00000373720 TPRP12270 2363 aaKnown RBP6.81□□□□□ -1.32
SNRNP40-202ENST00000373720 LAMA5O15230 3695 aa6.81□□□□□ -1.32
SNRNP40-202ENST00000373720 A0A1B0GXF2 115 aa6.8□□□□□ -1.32
SNRNP40-202ENST00000373720 IFITM10A6NMD0 228 aa6.8□□□□□ -1.32
SNRNP40-202ENST00000373720 HIGD1CA8MV81 97 aa6.8□□□□□ -1.32
SNRNP40-202ENST00000373720 ATP6V0E1O15342 81 aa6.8□□□□□ -1.32
SNRNP40-202ENST00000373720 BUB3O43684 328 aa6.8□□□□□ -1.32
SNRNP40-202ENST00000373720 IGHV3-48P01763 117 aa6.8□□□□□ -1.32
SNRNP40-202ENST00000373720 CLEC3BP05452 202 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms