RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 OR2D3Q8NGH3 330 aa18.76■□□□□ 0.59
CDK9-201ENST00000373264 KCNS1Q96KK3 526 aa18.76■□□□□ 0.59
CDK9-201ENST00000373264 RNF224P0DH78 156 aa18.76■□□□□ 0.59
CDK9-201ENST00000373264 Q8N976 141 aa18.76■□□□□ 0.59
CDK9-201ENST00000373264 NPBQ8NG41 125 aa18.76■□□□□ 0.59
CDK9-201ENST00000373264 PGLYRP4Q96LB8 373 aa18.76■□□□□ 0.59
CDK9-201ENST00000373264 FANCD2OSQ96PS1 177 aa18.76■□□□□ 0.59
CDK9-201ENST00000373264 KIR2DL5BA0A0G2JN68 375 aa18.75■□□□□ 0.59
CDK9-201ENST00000373264 KIR2DL5BA0A0G2JPC4 375 aa18.75■□□□□ 0.59
CDK9-201ENST00000373264 NTF3P20783 257 aa18.75■□□□□ 0.59
CDK9-201ENST00000373264 KIR2DL5AQ8N109 375 aa18.75■□□□□ 0.59
CDK9-201ENST00000373264 RPP21Q9H633 154 aaKnown RBP18.75■□□□□ 0.59
CDK9-201ENST00000373264 ZNF785A8K8V0 405 aa18.75■□□□□ 0.59
CDK9-201ENST00000373264 FMC1Q96HJ9 113 aa18.75■□□□□ 0.59
CDK9-201ENST00000373264 C19orf71A6NCJ1 209 aa18.74■□□□□ 0.59
CDK9-201ENST00000373264 Q86TA4 180 aa18.74■□□□□ 0.59
CDK9-201ENST00000373264 WIPF2Q8TF74 440 aaPredicted RBP18.74■□□□□ 0.59
CDK9-201ENST00000373264 PRSS22Q9GZN4 317 aa18.74■□□□□ 0.59
CDK9-201ENST00000373264 M0R1W7 72 aa18.74■□□□□ 0.59
CDK9-201ENST00000373264 FCGR2BP31994 310 aaPredicted RBP18.74■□□□□ 0.59
CDK9-201ENST00000373264 CEACAM3P40198 252 aa18.74■□□□□ 0.59
CDK9-201ENST00000373264 RNF125Q96EQ8 232 aa18.74■□□□□ 0.59
CDK9-201ENST00000373264 SHANK2-AS3Q9BTD1 123 aa18.74■□□□□ 0.59
CDK9-201ENST00000373264 IGHV3OR16-8A0A075B7F1 116 aa18.73■□□□□ 0.59
CDK9-201ENST00000373264 NIT1Q86X76 327 aa18.73■□□□□ 0.59
CDK9-201ENST00000373264 OTORQ9NRC9 128 aa18.73■□□□□ 0.59
CDK9-201ENST00000373264 F8W735 103 aaPredicted RBP18.73■□□□□ 0.59
CDK9-201ENST00000373264 M0QZ24 198 aa18.73■□□□□ 0.59
CDK9-201ENST00000373264 M0R3E3 92 aa18.73■□□□□ 0.59
CDK9-201ENST00000373264 P01737 135 aa18.73■□□□□ 0.59
CDK9-201ENST00000373264 HOXB4P17483 251 aaPredicted RBP18.73■□□□□ 0.59
CDK9-201ENST00000373264 TEX43Q6ZNM6 134 aa18.73■□□□□ 0.59
CDK9-201ENST00000373264 ZNF324O75467 553 aaPredicted RBP18.72■□□□□ 0.59
CDK9-201ENST00000373264 COX19Q49B96 90 aa18.72■□□□□ 0.59
CDK9-201ENST00000373264 NEU4Q8WWR8 484 aaPredicted RBP18.72■□□□□ 0.59
CDK9-201ENST00000373264 TMEM14CQ9P0S9 112 aa18.72■□□□□ 0.59
CDK9-201ENST00000373264 TRBV19A0A075B6N1 114 aa18.72■□□□□ 0.59
CDK9-201ENST00000373264 A0A1B0GXF2 115 aa18.72■□□□□ 0.59
CDK9-201ENST00000373264 H3BRN7 92 aa18.72■□□□□ 0.59
CDK9-201ENST00000373264 FAM120AOSQ5T036 256 aa18.72■□□□□ 0.59
CDK9-201ENST00000373264 UBTD1Q9HAC8 227 aa18.72■□□□□ 0.59
CDK9-201ENST00000373264 UQCRFS1P47985 274 aa18.71■□□□□ 0.59
CDK9-201ENST00000373264 FOXA3P55318 350 aaPredicted RBP18.71■□□□□ 0.59
CDK9-201ENST00000373264 ARPC1AQ92747 370 aa18.71■□□□□ 0.59
CDK9-201ENST00000373264 SNHG12Q9BXW3 62 aa18.71■□□□□ 0.59
CDK9-201ENST00000373264 IGHV3-35A0A0C4DH35 117 aa18.71■□□□□ 0.58
CDK9-201ENST00000373264 GNG7O60262 68 aa18.71■□□□□ 0.58
CDK9-201ENST00000373264 IGLC2P0DOY2 106 aa18.71■□□□□ 0.58
CDK9-201ENST00000373264 IGLV11-55A0A075B6I3 123 aa18.7■□□□□ 0.58
CDK9-201ENST00000373264 SIGLEC15Q6ZMC9 328 aa18.7■□□□□ 0.58
CDK9-201ENST00000373264 ALKBH7Q9BT30 221 aaPredicted RBP18.7■□□□□ 0.58
CDK9-201ENST00000373264 NDUFB8O95169 186 aa18.69■□□□□ 0.58
CDK9-201ENST00000373264 DTX2Q86UW9 622 aa18.69■□□□□ 0.58
CDK9-201ENST00000373264 DIRC3C9JPN6 131 aa18.69■□□□□ 0.58
CDK9-201ENST00000373264 MRPS12O15235 138 aaKnown RBP18.69■□□□□ 0.58
CDK9-201ENST00000373264 OR2J3O76001 311 aa18.69■□□□□ 0.58
CDK9-201ENST00000373264 HLA-DRB1P01911 266 aa18.69■□□□□ 0.58
CDK9-201ENST00000373264 ZC2HC1AQ96GY0 325 aa18.69■□□□□ 0.58
CDK9-201ENST00000373264 SRSF8Q9BRL6 282 aaKnown RBP18.69■□□□□ 0.58
CDK9-201ENST00000373264 BPIFA4PQ86YQ2 179 aa18.68■□□□□ 0.58
CDK9-201ENST00000373264 SH2D7A6NKC9 451 aaPredicted RBP18.68■□□□□ 0.58
CDK9-201ENST00000373264 C3orf79P0CE67 100 aa18.68■□□□□ 0.58
CDK9-201ENST00000373264 COL8A1P27658 744 aa18.68■□□□□ 0.58
CDK9-201ENST00000373264 Q56UQ5 140 aa18.68■□□□□ 0.58
CDK9-201ENST00000373264 ZNF562Q6V9R5 426 aa18.68■□□□□ 0.58
CDK9-201ENST00000373264 DAZAP1Q96EP5 407 aaKnown RBP18.68■□□□□ 0.58
CDK9-201ENST00000373264 OR2T8A6NH00 312 aa18.67■□□□□ 0.58
CDK9-201ENST00000373264 C19orf84I3L1E1 186 aa18.67■□□□□ 0.58
CDK9-201ENST00000373264 PMCHL1Q16048 86 aa18.67■□□□□ 0.58
CDK9-201ENST00000373264 LCN12Q6JVE5 192 aa18.67■□□□□ 0.58
CDK9-201ENST00000373264 ZNF705AQ6ZN79 300 aaPredicted RBP18.67■□□□□ 0.58
CDK9-201ENST00000373264 WI2-2373I1.2A0A1W2PRP0 233 aa18.67■□□□□ 0.58
CDK9-201ENST00000373264 EGR2P11161 476 aaPredicted RBP18.67■□□□□ 0.58
CDK9-201ENST00000373264 RASL11AQ6T310 242 aa18.67■□□□□ 0.58
CDK9-201ENST00000373264 ATOH7Q8N100 152 aa18.67■□□□□ 0.58
CDK9-201ENST00000373264 URB1-AS1Q96HZ7 61 aa18.67■□□□□ 0.58
CDK9-201ENST00000373264 ZNF414Q96IQ9 312 aa18.67■□□□□ 0.58
CDK9-201ENST00000373264 CHRDL1Q9BU40 450 aa18.67■□□□□ 0.58
CDK9-201ENST00000373264 A8MWL6 223 aa18.66■□□□□ 0.58
CDK9-201ENST00000373264 HBBP68871 147 aa18.66■□□□□ 0.58
CDK9-201ENST00000373264 RNASEKQ6P5S7 137 aaKnown RBP18.66■□□□□ 0.58
CDK9-201ENST00000373264 Q8N6K4 173 aa18.66■□□□□ 0.58
CDK9-201ENST00000373264 OR4F17Q8NGA8 305 aa18.66■□□□□ 0.58
CDK9-201ENST00000373264 C2orf88Q9BSF0 95 aa18.66■□□□□ 0.58
CDK9-201ENST00000373264 VAMP8Q9BV40 100 aa18.66■□□□□ 0.58
CDK9-201ENST00000373264 ZNF492Q9P255 531 aa18.66■□□□□ 0.58
CDK9-201ENST00000373264 TMEM11P17152 192 aa18.66■□□□□ 0.58
CDK9-201ENST00000373264 SMIM12Q96EX1 92 aa18.66■□□□□ 0.58
CDK9-201ENST00000373264 LPAR2Q9HBW0 351 aa18.66■□□□□ 0.58
CDK9-201ENST00000373264 SIRPDQ9H106 197 aa18.65■□□□□ 0.58
CDK9-201ENST00000373264 OVOL3O00110 214 aa18.65■□□□□ 0.58
CDK9-201ENST00000373264 IGFL4Q6B9Z1 124 aa18.65■□□□□ 0.58
CDK9-201ENST00000373264 IGHV7-81A0A0B4J1V7 117 aa18.64■□□□□ 0.58
CDK9-201ENST00000373264 CRIP1P50238 77 aa18.64■□□□□ 0.58
CDK9-201ENST00000373264 MAJINQ3KP22 176 aa18.64■□□□□ 0.58
CDK9-201ENST00000373264 AJUBAQ96IF1 538 aa18.64■□□□□ 0.58
CDK9-201ENST00000373264 C8orf49Q96NF6 230 aa18.64■□□□□ 0.58
CDK9-201ENST00000373264 NPIPB5A8MRT5 1133 aa18.64■□□□□ 0.57
CDK9-201ENST00000373264 C21orf62Q9NYP8 219 aa18.64■□□□□ 0.57
CDK9-201ENST00000373264 MFAP4P55083 255 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms