RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 RPEL1Q2QD12 228 aa5.08□□□□□ -1.6
CHD6-202ENST00000373222 TMEM155Q4W5P6 130 aa5.08□□□□□ -1.6
CHD6-202ENST00000373222 LRRC10Q5BKY1 277 aa5.08□□□□□ -1.6
CHD6-202ENST00000373222 IL17RELQ6ZVW7 336 aa5.08□□□□□ -1.6
CHD6-202ENST00000373222 LINC00305Q7Z4B0 112 aa5.08□□□□□ -1.6
CHD6-202ENST00000373222 TMEM167AQ8TBQ9 72 aa5.08□□□□□ -1.6
CHD6-202ENST00000373222 RAB1BQ9H0U4 201 aa5.08□□□□□ -1.6
CHD6-202ENST00000373222 GNB4Q9HAV0 340 aa5.08□□□□□ -1.6
CHD6-202ENST00000373222 IGHV1-69-2A0A0G2JMI3 117 aa5.07□□□□□ -1.6
CHD6-202ENST00000373222 FBLL1A6NHQ2 334 aaKnown RBP5.07□□□□□ -1.6
CHD6-202ENST00000373222 VWC2LB2RUY7 222 aa5.07□□□□□ -1.6
CHD6-202ENST00000373222 B5MCH6 92 aa5.07□□□□□ -1.6
CHD6-202ENST00000373222 COX7A2P2O60397 106 aa5.07□□□□□ -1.6
CHD6-202ENST00000373222 BRI3O95415 125 aa5.07□□□□□ -1.6
CHD6-202ENST00000373222 PAX1P15863 534 aa5.07□□□□□ -1.6
CHD6-202ENST00000373222 CRISP2P16562 243 aa5.07□□□□□ -1.6
CHD6-202ENST00000373222 ERHP84090 104 aaKnown RBP5.07□□□□□ -1.6
CHD6-202ENST00000373222 IQCJQ1A5X6 159 aa5.07□□□□□ -1.6
CHD6-202ENST00000373222 IBA57Q5T440 356 aaKnown RBP5.07□□□□□ -1.6
CHD6-202ENST00000373222 GDF5OSQ5U4N7 250 aa5.07□□□□□ -1.6
CHD6-202ENST00000373222 LINC00322Q6ZN03 302 aaPredicted RBP5.07□□□□□ -1.6
CHD6-202ENST00000373222 FAM19A2Q8N3H0 131 aa5.07□□□□□ -1.6
CHD6-202ENST00000373222 OR1B1Q8NGR6 318 aa5.07□□□□□ -1.6
CHD6-202ENST00000373222 CMTM2Q8TAZ6 248 aa5.07□□□□□ -1.6
CHD6-202ENST00000373222 HSPB9Q9BQS6 159 aa5.07□□□□□ -1.6
CHD6-202ENST00000373222 SSBP4Q9BWG4 385 aaPredicted RBP5.07□□□□□ -1.6
CHD6-202ENST00000373222 FBXL15Q9H469 300 aa5.07□□□□□ -1.6
CHD6-202ENST00000373222 FKBP11Q9NYL4 201 aa5.07□□□□□ -1.6
CHD6-202ENST00000373222 NAT8BQ9UHF3 227 aa5.07□□□□□ -1.6
CHD6-202ENST00000373222 WASHC3Q9Y3C0 194 aa5.07□□□□□ -1.6
CHD6-202ENST00000373222 POLQO75417 2590 aa5.07□□□□□ -1.6
CHD6-202ENST00000373222 MYO18BQ8IUG5 2567 aa5.07□□□□□ -1.6
CHD6-202ENST00000373222 ABCA2Q9BZC7 2435 aa5.07□□□□□ -1.6
CHD6-202ENST00000373222 USP9XQ93008 2570 aaPredicted RBP5.07□□□□□ -1.6
CHD6-202ENST00000373222 TRAV8-1A0A0A6YYK1 113 aa5.07□□□□□ -1.6
CHD6-202ENST00000373222 IGHV2-26A0A0B4J1V2 119 aa5.07□□□□□ -1.6
CHD6-202ENST00000373222 MT-CO2P00403 227 aa5.07□□□□□ -1.6
CHD6-202ENST00000373222 USF1P22415 310 aaPredicted RBP5.07□□□□□ -1.6
CHD6-202ENST00000373222 GPR6P46095 362 aaPredicted RBP5.07□□□□□ -1.6
CHD6-202ENST00000373222 MEF2CQ06413 473 aaPredicted RBP5.07□□□□□ -1.6
CHD6-202ENST00000373222 C10orf113Q5VZT2 155 aa5.07□□□□□ -1.6
CHD6-202ENST00000373222 ZNF329Q86UD4 541 aa5.07□□□□□ -1.6
CHD6-202ENST00000373222 PNKDQ8N490 385 aa5.07□□□□□ -1.6
CHD6-202ENST00000373222 FXYD5Q96DB9 178 aa5.07□□□□□ -1.6
CHD6-202ENST00000373222 UBTD1Q9HAC8 227 aa5.07□□□□□ -1.6
CHD6-202ENST00000373222 TMEM167BQ9NRX6 74 aa5.07□□□□□ -1.6
CHD6-202ENST00000373222 TCRBV4S1A1TA0A5B7 111 aa5.06□□□□□ -1.6
CHD6-202ENST00000373222 ZNF705FA8MVS1 300 aaPredicted RBP5.06□□□□□ -1.6
CHD6-202ENST00000373222 FAM229AH3BQW9 127 aa5.06□□□□□ -1.6
CHD6-202ENST00000373222 GATCO43716 136 aaKnown RBP5.06□□□□□ -1.6
CHD6-202ENST00000373222 GCGP01275 180 aa5.06□□□□□ -1.6
CHD6-202ENST00000373222 ZNF705DP0CH99 300 aaPredicted RBP5.06□□□□□ -1.6
CHD6-202ENST00000373222 ZNF705BP0CI00 300 aaPredicted RBP5.06□□□□□ -1.6
CHD6-202ENST00000373222 PPOXP50336 477 aa5.06□□□□□ -1.6
CHD6-202ENST00000373222 KLRD1Q13241 179 aa5.06□□□□□ -1.6
CHD6-202ENST00000373222 TIGITQ495A1 244 aa5.06□□□□□ -1.6
CHD6-202ENST00000373222 KLF17Q5JT82 389 aaPredicted RBP5.06□□□□□ -1.6
CHD6-202ENST00000373222 TOMM20LQ6UXN7 152 aa5.06□□□□□ -1.6
CHD6-202ENST00000373222 TMEM136Q6ZRR5 245 aa5.06□□□□□ -1.6
CHD6-202ENST00000373222 BAGE3Q86Y29 109 aa5.06□□□□□ -1.6
CHD6-202ENST00000373222 BAGE2Q86Y30 109 aa5.06□□□□□ -1.6
CHD6-202ENST00000373222 BTF3L4Q96K17 158 aa5.06□□□□□ -1.6
CHD6-202ENST00000373222 TBX15Q96SF7 602 aa5.06□□□□□ -1.6
CHD6-202ENST00000373222 TXNDC17Q9BRA2 123 aa5.06□□□□□ -1.6
CHD6-202ENST00000373222 PAXXQ9BUH6 204 aa5.06□□□□□ -1.6
CHD6-202ENST00000373222 TMEM133Q9H2Q1 129 aa5.06□□□□□ -1.6
CHD6-202ENST00000373222 NAGKQ9UJ70 344 aa5.06□□□□□ -1.6
CHD6-202ENST00000373222 AMMECR1Q9Y4X0 333 aaPredicted RBP5.06□□□□□ -1.6
CHD6-202ENST00000373222 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.06□□□□□ -1.61e-6■■■□□ 18.6
CHD6-202ENST00000373222 IGSF10Q6WRI0 2623 aa5.06□□□□□ -1.6
CHD6-202ENST00000373222 BMPR1BO00238 502 aa5.06□□□□□ -1.6
CHD6-202ENST00000373222 NBR2O15453 112 aa5.06□□□□□ -1.6
CHD6-202ENST00000373222 SRIP30626 198 aa5.06□□□□□ -1.6
CHD6-202ENST00000373222 COMPP49747 757 aaPredicted RBP5.06□□□□□ -1.6
CHD6-202ENST00000373222 SELENOTP62341 195 aa5.06□□□□□ -1.6
CHD6-202ENST00000373222 CX3CL1P78423 397 aa5.06□□□□□ -1.6
CHD6-202ENST00000373222 PDPNQ86YL7 162 aa5.06□□□□□ -1.6
CHD6-202ENST00000373222 VN1R17PQ8TDU5 208 aa5.06□□□□□ -1.6
CHD6-202ENST00000373222 TNFRSF19Q9NS68 423 aa5.06□□□□□ -1.6
CHD6-202ENST00000373222 ZNF835Q9Y2P0 537 aa5.06□□□□□ -1.6
CHD6-202ENST00000373222 PAM16Q9Y3D7 125 aa5.06□□□□□ -1.6
CHD6-202ENST00000373222 PIEZO1Q92508 2521 aa5.05□□□□□ -1.6
CHD6-202ENST00000373222 IGHV1-3A0A0C4DH29 117 aa5.05□□□□□ -1.6
CHD6-202ENST00000373222 A0A1W2PRE2 83 aa5.05□□□□□ -1.6
CHD6-202ENST00000373222 FNDC10F2Z333 226 aa5.05□□□□□ -1.6
CHD6-202ENST00000373222 M0QZ24 198 aa5.05□□□□□ -1.6
CHD6-202ENST00000373222 IGLV1-47P01700 117 aa5.05□□□□□ -1.6
CHD6-202ENST00000373222 SRD5A1P18405 259 aa5.05□□□□□ -1.6
CHD6-202ENST00000373222 PMCHP20382 165 aa5.05□□□□□ -1.6
CHD6-202ENST00000373222 TAS2R45P59539 299 aa5.05□□□□□ -1.6
CHD6-202ENST00000373222 CD300EQ496F6 205 aaPredicted RBP5.05□□□□□ -1.6
CHD6-202ENST00000373222 TPTE2P1Q5T6R2 138 aa5.05□□□□□ -1.6
CHD6-202ENST00000373222 TCF24Q7RTU0 167 aa5.05□□□□□ -1.6
CHD6-202ENST00000373222 C17orf77Q96MU5 243 aa5.05□□□□□ -1.6
CHD6-202ENST00000373222 SNHG12Q9BXW3 62 aa5.05□□□□□ -1.6
CHD6-202ENST00000373222 CSDC2Q9Y534 153 aaKnown RBP5.05□□□□□ -1.6
CHD6-202ENST00000373222 HILPDAQ9Y5L2 63 aa5.05□□□□□ -1.6
CHD6-202ENST00000373222 TNFRSF18Q9Y5U5 241 aa5.05□□□□□ -1.6
CHD6-202ENST00000373222 CSPG4Q6UVK1 2322 aa5.05□□□□□ -1.6
CHD6-202ENST00000373222 PGPA6NDG6 321 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms