RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 TEPPQ6URK8 271 aa13.92□□□□□ -0.18
TRAPPC3-204ENST00000373166 TMEM182Q6ZP80 229 aaPredicted RBP13.92□□□□□ -0.18
TRAPPC3-204ENST00000373166 NRARPQ7Z6K4 114 aa13.92□□□□□ -0.18
TRAPPC3-204ENST00000373166 GGACTQ9BVM4 153 aa13.92□□□□□ -0.18
TRAPPC3-204ENST00000373166 ZNF98A6NK75 572 aa13.91□□□□□ -0.18
TRAPPC3-204ENST00000373166 LINC00869P0C866 280 aa13.91□□□□□ -0.18
TRAPPC3-204ENST00000373166 PSMB3P49720 205 aa13.91□□□□□ -0.18
TRAPPC3-204ENST00000373166 RAP2BP61225 183 aa13.91□□□□□ -0.18
TRAPPC3-204ENST00000373166 SLC25A32Q9H2D1 315 aa13.91□□□□□ -0.18
TRAPPC3-204ENST00000373166 DOK5Q9P104 306 aa13.91□□□□□ -0.18
TRAPPC3-204ENST00000373166 INMT-MINDY4F8WBC2 141 aa13.9□□□□□ -0.18
TRAPPC3-204ENST00000373166 MEOX2P50222 304 aa13.9□□□□□ -0.18
TRAPPC3-204ENST00000373166 SLC38A11Q08AI6 406 aa13.9□□□□□ -0.18
TRAPPC3-204ENST00000373166 ARL16Q0P5N6 197 aa13.9□□□□□ -0.18
TRAPPC3-204ENST00000373166 S100A7AQ86SG5 101 aa13.9□□□□□ -0.18
TRAPPC3-204ENST00000373166 ZNF546Q86UE3 836 aa13.9□□□□□ -0.18
TRAPPC3-204ENST00000373166 GPR82Q96P67 336 aa13.9□□□□□ -0.18
TRAPPC3-204ENST00000373166 HIGD1AQ9Y241 93 aa13.9□□□□□ -0.18
TRAPPC3-204ENST00000373166 DNAH17Q9UFH2 4485 aa13.89□□□□□ -0.19
TRAPPC3-204ENST00000373166 A0A1B0GVY2 172 aa13.89□□□□□ -0.19
TRAPPC3-204ENST00000373166 GOSR2O14653 212 aa13.89□□□□□ -0.19
TRAPPC3-204ENST00000373166 HYPMO75409 117 aa13.89□□□□□ -0.19
TRAPPC3-204ENST00000373166 OR5G3P0C626 314 aa13.89□□□□□ -0.19
TRAPPC3-204ENST00000373166 RAB32Q13637 225 aa13.89□□□□□ -0.19
TRAPPC3-204ENST00000373166 Q8NAQ8 132 aa13.89□□□□□ -0.19
TRAPPC3-204ENST00000373166 LINC00052Q96N35 136 aa13.89□□□□□ -0.19
TRAPPC3-204ENST00000373166 H3BRN7 92 aa13.88□□□□□ -0.19
TRAPPC3-204ENST00000373166 ISLRO14498 428 aa13.88□□□□□ -0.19
TRAPPC3-204ENST00000373166 SOCS3O14543 225 aa13.88□□□□□ -0.19
TRAPPC3-204ENST00000373166 CST7O76096 145 aa13.88□□□□□ -0.19
TRAPPC3-204ENST00000373166 C4BPBP20851 252 aa13.88□□□□□ -0.19
TRAPPC3-204ENST00000373166 PLP1P60201 277 aa13.88□□□□□ -0.19
TRAPPC3-204ENST00000373166 NUTF2P61970 127 aaKnown RBP13.88□□□□□ -0.19
TRAPPC3-204ENST00000373166 STX12Q86Y82 276 aa13.88□□□□□ -0.19
TRAPPC3-204ENST00000373166 SCRT1Q9BWW7 348 aa13.88□□□□□ -0.19
TRAPPC3-204ENST00000373166 SLC25A39Q9BZJ4 359 aaPredicted RBP13.88□□□□□ -0.19
TRAPPC3-204ENST00000373166 C11orf1Q9H5F2 150 aa13.88□□□□□ -0.19
TRAPPC3-204ENST00000373166 LYRM2Q9NU23 88 aaPredicted RBP13.88□□□□□ -0.19
TRAPPC3-204ENST00000373166 IGHV4-4A0A075B6R2 117 aa13.87□□□□□ -0.19
TRAPPC3-204ENST00000373166 TRAV10A0A0B4J240 114 aa13.87□□□□□ -0.19
TRAPPC3-204ENST00000373166 FAM24AA6NFZ4 105 aa13.87□□□□□ -0.19
TRAPPC3-204ENST00000373166 HLA-DRB4P13762 266 aa13.87□□□□□ -0.19
TRAPPC3-204ENST00000373166 HLA-DMBP28068 263 aa13.87□□□□□ -0.19
TRAPPC3-204ENST00000373166 IL15RAQ13261 267 aa13.87□□□□□ -0.19
TRAPPC3-204ENST00000373166 PXDC1Q5TGL8 231 aa13.87□□□□□ -0.19
TRAPPC3-204ENST00000373166 C16orf92Q96LL3 132 aa13.87□□□□□ -0.19
TRAPPC3-204ENST00000373166 SHANK2-AS3Q9BTD1 123 aa13.87□□□□□ -0.19
TRAPPC3-204ENST00000373166 ARL6Q9H0F7 186 aa13.87□□□□□ -0.19
TRAPPC3-204ENST00000373166 HLA-DRB4X5D2U9 266 aa13.87□□□□□ -0.19
TRAPPC3-204ENST00000373166 H3BMM0 161 aa13.86□□□□□ -0.19
TRAPPC3-204ENST00000373166 AGPAT2O15120 278 aa13.86□□□□□ -0.19
TRAPPC3-204ENST00000373166 SULT1A1P50225 295 aa13.86□□□□□ -0.19
TRAPPC3-204ENST00000373166 HBG1P69891 147 aa13.86□□□□□ -0.19
TRAPPC3-204ENST00000373166 HBG2P69892 147 aa13.86□□□□□ -0.19
TRAPPC3-204ENST00000373166 RAB31Q13636 194 aa13.86□□□□□ -0.19
TRAPPC3-204ENST00000373166 FOXI2Q6ZQN5 318 aa13.86□□□□□ -0.19
TRAPPC3-204ENST00000373166 MARVELD1Q9BSK0 173 aa13.86□□□□□ -0.19
TRAPPC3-204ENST00000373166 RSG1Q9BU20 258 aa13.86□□□□□ -0.19
TRAPPC3-204ENST00000373166 UQCC1Q9NVA1 299 aa13.86□□□□□ -0.19
TRAPPC3-204ENST00000373166 RNF24Q9Y225 148 aa13.86□□□□□ -0.19
TRAPPC3-204ENST00000373166 DYNC1H1Q14204 4646 aaKnown RBP13.86□□□□□ -0.19
TRAPPC3-204ENST00000373166 IGHV4-28A0A0C4DH34 117 aa13.85□□□□□ -0.19
TRAPPC3-204ENST00000373166 IGSF23A1L1A6 192 aa13.85□□□□□ -0.19
TRAPPC3-204ENST00000373166 PRSS29PA6NIE9 313 aa13.85□□□□□ -0.19
TRAPPC3-204ENST00000373166 SIX6O95475 246 aa13.85□□□□□ -0.19
TRAPPC3-204ENST00000373166 GIG44P09565 113 aaPredicted RBP13.85□□□□□ -0.19
TRAPPC3-204ENST00000373166 RBMY1A1P0DJD3 496 aaKnown RBP13.85□□□□□ -0.19
TRAPPC3-204ENST00000373166 RBMY1CP0DJD4 496 aa13.85□□□□□ -0.19
TRAPPC3-204ENST00000373166 MIFP14174 115 aa13.85□□□□□ -0.19
TRAPPC3-204ENST00000373166 RPL7P18124 248 aaKnown RBP13.85□□□□□ -0.19
TRAPPC3-204ENST00000373166 RBMY1FQ15415 496 aaKnown RBP13.85□□□□□ -0.19
TRAPPC3-204ENST00000373166 Q6ZTC4 211 aa13.85□□□□□ -0.19
TRAPPC3-204ENST00000373166 UHRF2Q96PU4 802 aa13.85□□□□□ -0.19
TRAPPC3-204ENST00000373166 C1QTNF4Q9BXJ3 329 aa13.85□□□□□ -0.19
TRAPPC3-204ENST00000373166 SAV1Q9H4B6 383 aaPredicted RBP13.85□□□□□ -0.19
TRAPPC3-204ENST00000373166 DNAH11Q96DT5 4516 aa13.85□□□□□ -0.19
TRAPPC3-204ENST00000373166 ABCA13Q86UQ4 5058 aa13.85□□□□□ -0.19
TRAPPC3-204ENST00000373166 AGRNO00468 2067 aa13.84□□□□□ -0.19
TRAPPC3-204ENST00000373166 RLN2P04090 185 aa13.84□□□□□ -0.19
TRAPPC3-204ENST00000373166 S100A11P31949 105 aa13.84□□□□□ -0.19
TRAPPC3-204ENST00000373166 SPATA31B1PQ5VZV4 182 aa13.84□□□□□ -0.19
TRAPPC3-204ENST00000373166 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.84□□□□□ -0.19
TRAPPC3-204ENST00000373166 TMEM252Q8N6L7 170 aa13.84□□□□□ -0.19
TRAPPC3-204ENST00000373166 MGST2Q99735 147 aa13.84□□□□□ -0.19
TRAPPC3-204ENST00000373166 RNF126Q9BV68 326 aa13.84□□□□□ -0.19
TRAPPC3-204ENST00000373166 NMES1Q9C002 83 aa13.84□□□□□ -0.19
TRAPPC3-204ENST00000373166 ARV1Q9H2C2 271 aa13.84□□□□□ -0.19
TRAPPC3-204ENST00000373166 RPRMQ9NS64 109 aa13.84□□□□□ -0.19
TRAPPC3-204ENST00000373166 UBE2L5PA0A1B0GUS4 154 aa13.83□□□□□ -0.2
TRAPPC3-204ENST00000373166 SSNA1O43805 119 aa13.83□□□□□ -0.2
TRAPPC3-204ENST00000373166 COX7A2P2O60397 106 aa13.83□□□□□ -0.2
TRAPPC3-204ENST00000373166 CAMLGP49069 296 aa13.83□□□□□ -0.2
TRAPPC3-204ENST00000373166 CYCSP99999 105 aaKnown RBP13.83□□□□□ -0.2
TRAPPC3-204ENST00000373166 EBLN2Q6P2I7 272 aa13.83□□□□□ -0.2
TRAPPC3-204ENST00000373166 CLEC5AQ9NY25 188 aa13.83□□□□□ -0.2
TRAPPC3-204ENST00000373166 WDR83OSQ9Y284 106 aa13.83□□□□□ -0.2
TRAPPC3-204ENST00000373166 PKD1P98161 4303 aa13.82□□□□□ -0.2
TRAPPC3-204ENST00000373166 P0DMU3 169 aa13.82□□□□□ -0.2
TRAPPC3-204ENST00000373166 FAM231AP0DMU4 169 aa13.82□□□□□ -0.2
TRAPPC3-204ENST00000373166 FAM231CP0DMU5 169 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms