RNA–Protein interactions for RNA: ENST00000370885.8

EXOSC1-202, Transcript of exosome component 1, humanhuman

TSL 3 BASIC

Gene EXOSC1, Length 718 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-202ENST00000370885 CCL20P78556 96 aa8.13□□□□□ -1.11
EXOSC1-202ENST00000370885 SERF2P84101 59 aa8.13□□□□□ -1.11
EXOSC1-202ENST00000370885 GUK1Q16774 197 aa8.13□□□□□ -1.11
EXOSC1-202ENST00000370885 BSXQ3C1V8 233 aa8.13□□□□□ -1.11
EXOSC1-202ENST00000370885 AKR1C8PQ5T2L2 129 aa8.13□□□□□ -1.11
EXOSC1-202ENST00000370885 FAM90A2PQ658T7 463 aa8.13□□□□□ -1.11
EXOSC1-202ENST00000370885 OR8G2PQ6IF36 304 aa8.13□□□□□ -1.11
EXOSC1-202ENST00000370885 TOMM20LQ6UXN7 152 aa8.13□□□□□ -1.11
EXOSC1-202ENST00000370885 OR10P1Q8NGE3 313 aa8.13□□□□□ -1.11
EXOSC1-202ENST00000370885 SUN5Q8TC36 379 aa8.13□□□□□ -1.11
EXOSC1-202ENST00000370885 TMEM170AQ8WVE7 144 aa8.13□□□□□ -1.11
EXOSC1-202ENST00000370885 MBD3L1Q8WWY6 194 aa8.13□□□□□ -1.11
EXOSC1-202ENST00000370885 TXN2Q99757 166 aa8.13□□□□□ -1.11
EXOSC1-202ENST00000370885 SPAG8Q99932 426 aaPredicted RBP8.13□□□□□ -1.11
EXOSC1-202ENST00000370885 RHPN1-AS1Q9BWJ2 59 aa8.13□□□□□ -1.11
EXOSC1-202ENST00000370885 GGTLC1Q9BX51 225 aa8.13□□□□□ -1.11
EXOSC1-202ENST00000370885 ZFAND3Q9H8U3 227 aa8.13□□□□□ -1.11
EXOSC1-202ENST00000370885 F8W036 122 aa8.12□□□□□ -1.11
EXOSC1-202ENST00000370885 NUPL2O15504 423 aaKnown RBP8.12□□□□□ -1.11
EXOSC1-202ENST00000370885 H2AFB1P0C5Y9 115 aa8.12□□□□□ -1.11
EXOSC1-202ENST00000370885 RPP30P78346 268 aaKnown RBP8.12□□□□□ -1.11
EXOSC1-202ENST00000370885 ERHP84090 104 aaKnown RBP8.12□□□□□ -1.11
EXOSC1-202ENST00000370885 BTN1A1Q13410 526 aa8.12□□□□□ -1.11
EXOSC1-202ENST00000370885 SMUG1Q53HV7 270 aa8.12□□□□□ -1.11
EXOSC1-202ENST00000370885 APRG1Q8IVJ8 170 aa8.12□□□□□ -1.11
EXOSC1-202ENST00000370885 RSG1Q9BU20 258 aa8.12□□□□□ -1.11
EXOSC1-202ENST00000370885 RPRMQ9NS64 109 aa8.12□□□□□ -1.11
EXOSC1-202ENST00000370885 DNAH10Q8IVF4 4471 aa8.11□□□□□ -1.11
EXOSC1-202ENST00000370885 IGKV3-7A0A075B6H7 116 aa8.11□□□□□ -1.11
EXOSC1-202ENST00000370885 IGHV3-66A0A0C4DH42 116 aa8.11□□□□□ -1.11
EXOSC1-202ENST00000370885 DNASE2O00115 360 aaPredicted RBP8.11□□□□□ -1.11
EXOSC1-202ENST00000370885 YIF1AO95070 293 aa8.11□□□□□ -1.11
EXOSC1-202ENST00000370885 SFTA3P0C7M3 94 aa8.11□□□□□ -1.11
EXOSC1-202ENST00000370885 TFPI2P48307 235 aa8.11□□□□□ -1.11
EXOSC1-202ENST00000370885 SVBPQ8N300 66 aa8.11□□□□□ -1.11
EXOSC1-202ENST00000370885 GBGT1Q8N5D6 347 aa8.11□□□□□ -1.11
EXOSC1-202ENST00000370885 FAM24BQ8N5W8 94 aa8.11□□□□□ -1.11
EXOSC1-202ENST00000370885 TMEM116Q8NCL8 245 aa8.11□□□□□ -1.11
EXOSC1-202ENST00000370885 GGACTQ9BVM4 153 aa8.11□□□□□ -1.11
EXOSC1-202ENST00000370885 SMDT1Q9H4I9 107 aa8.11□□□□□ -1.11
EXOSC1-202ENST00000370885 VSIRQ9H7M9 311 aa8.11□□□□□ -1.11
EXOSC1-202ENST00000370885 UBE2L5PA0A1B0GUS4 154 aa8.1□□□□□ -1.11
EXOSC1-202ENST00000370885 RBFOX3A6NFN3 312 aa8.1□□□□□ -1.11
EXOSC1-202ENST00000370885 PRSS46E5RG02 174 aa8.1□□□□□ -1.11
EXOSC1-202ENST00000370885 GNG7O60262 68 aa8.1□□□□□ -1.11
EXOSC1-202ENST00000370885 HBE1P02100 147 aa8.1□□□□□ -1.11
EXOSC1-202ENST00000370885 RPL35AP18077 110 aaKnown RBP8.1□□□□□ -1.11
EXOSC1-202ENST00000370885 RELQ04864 619 aaPredicted RBP8.1□□□□□ -1.11
EXOSC1-202ENST00000370885 ZNF726P1Q15940 193 aa8.1□□□□□ -1.11
EXOSC1-202ENST00000370885 TMEM41BQ5BJD5 291 aa8.1□□□□□ -1.11
EXOSC1-202ENST00000370885 SFT2D1Q8WV19 159 aa8.1□□□□□ -1.11
EXOSC1-202ENST00000370885 PBDC1Q9BVG4 233 aa8.1□□□□□ -1.11
EXOSC1-202ENST00000370885 NKX6-2Q9C056 277 aaPredicted RBP8.1□□□□□ -1.11
EXOSC1-202ENST00000370885 HEYLQ9NQ87 328 aaPredicted RBP8.1□□□□□ -1.11
EXOSC1-202ENST00000370885 WDR83OSQ9Y284 106 aa8.1□□□□□ -1.11
EXOSC1-202ENST00000370885 PUS1Q9Y606 427 aaKnown RBP eCLIP8.1□□□□□ -1.11
EXOSC1-202ENST00000370885 KMT2AQ03164 3969 aa8.09□□□□□ -1.11
EXOSC1-202ENST00000370885 IFNA10P01566 189 aa8.09□□□□□ -1.11
EXOSC1-202ENST00000370885 IGKV1-17P01599 117 aa8.09□□□□□ -1.11
EXOSC1-202ENST00000370885 FGF7P21781 194 aa8.09□□□□□ -1.11
EXOSC1-202ENST00000370885 HOXA1P49639 335 aaPredicted RBP8.09□□□□□ -1.11
EXOSC1-202ENST00000370885 ATP5IP56385 69 aaPredicted RBP8.09□□□□□ -1.11
EXOSC1-202ENST00000370885 RAB2AP61019 212 aa8.09□□□□□ -1.11
EXOSC1-202ENST00000370885 DLK1P80370 383 aa8.09□□□□□ -1.11
EXOSC1-202ENST00000370885 DEFB135Q30KP9 77 aa8.09□□□□□ -1.11
EXOSC1-202ENST00000370885 ZNF506Q5JVG8 444 aa8.09□□□□□ -1.11
EXOSC1-202ENST00000370885 RARRES2Q99969 163 aa8.09□□□□□ -1.11
EXOSC1-202ENST00000370885 EIF5A2Q9GZV4 153 aaKnown RBP8.09□□□□□ -1.11
EXOSC1-202ENST00000370885 MAP6D1Q9H9H5 199 aa8.09□□□□□ -1.11
EXOSC1-202ENST00000370885 AGRNO00468 2067 aa8.09□□□□□ -1.11
EXOSC1-202ENST00000370885 A0A0J9YWU9 116 aa8.08□□□□□ -1.12
EXOSC1-202ENST00000370885 A0A1B0GV50 99 aa8.08□□□□□ -1.12
EXOSC1-202ENST00000370885 OR4C46A6NHA9 309 aa8.08□□□□□ -1.12
EXOSC1-202ENST00000370885 CLN5O75503 358 aa8.08□□□□□ -1.12
EXOSC1-202ENST00000370885 SNAPINO95295 136 aa8.08□□□□□ -1.12
EXOSC1-202ENST00000370885 SRP19P09132 144 aaKnown RBP8.08□□□□□ -1.12
EXOSC1-202ENST00000370885 NPBWR1P48145 328 aa8.08□□□□□ -1.12
EXOSC1-202ENST00000370885 PPT1P50897 306 aa8.08□□□□□ -1.12
EXOSC1-202ENST00000370885 RAB11AP62491 216 aa8.08□□□□□ -1.12
EXOSC1-202ENST00000370885 PMS2P11Q13670 270 aa8.08□□□□□ -1.12
EXOSC1-202ENST00000370885 TIGITQ495A1 244 aa8.08□□□□□ -1.12
EXOSC1-202ENST00000370885 ZNF600Q6ZNG1 722 aa8.08□□□□□ -1.12
EXOSC1-202ENST00000370885 TCF24Q7RTU0 167 aa8.08□□□□□ -1.12
EXOSC1-202ENST00000370885 WFDC3Q8IUB2 231 aa8.08□□□□□ -1.12
EXOSC1-202ENST00000370885 OR4X1Q8NH49 305 aa8.08□□□□□ -1.12
EXOSC1-202ENST00000370885 SLC35B3Q9H1N7 401 aa8.08□□□□□ -1.12
EXOSC1-202ENST00000370885 LOC102723971A0A1B0GUV8 181 aa8.07□□□□□ -1.12
EXOSC1-202ENST00000370885 FAM74A7A6NL05 159 aa8.07□□□□□ -1.12
EXOSC1-202ENST00000370885 SPRY2O43597 315 aa8.07□□□□□ -1.12
EXOSC1-202ENST00000370885 MBP02144 154 aa8.07□□□□□ -1.12
EXOSC1-202ENST00000370885 ICAM4Q14773 271 aa8.07□□□□□ -1.12
EXOSC1-202ENST00000370885 FAM74A3Q4VXF1 159 aa8.07□□□□□ -1.12
EXOSC1-202ENST00000370885 Q6ZWC4 215 aa8.07□□□□□ -1.12
EXOSC1-202ENST00000370885 SSX7Q7RTT5 188 aa8.07□□□□□ -1.12
EXOSC1-202ENST00000370885 RPP25LQ8N5L8 163 aaKnown RBP8.07□□□□□ -1.12
EXOSC1-202ENST00000370885 CLRN3Q8NCR9 226 aa8.07□□□□□ -1.12
EXOSC1-202ENST00000370885 SLC24A4Q8NFF2 622 aa8.07□□□□□ -1.12
EXOSC1-202ENST00000370885 IL17DQ8TAD2 202 aa8.07□□□□□ -1.12
EXOSC1-202ENST00000370885 RNF183Q96D59 192 aa8.07□□□□□ -1.12
EXOSC1-202ENST00000370885 NPCDR1Q9BY65 106 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms