RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 RPL7P18124 248 aaKnown RBP11.03□□□□□ -0.64
COL9A1-204ENST00000370496 ATF4P18848 351 aaPredicted RBP11.03□□□□□ -0.64
COL9A1-204ENST00000370496 DEFB131AP59861 70 aa11.03□□□□□ -0.64
COL9A1-204ENST00000370496 SBSPONQ8IVN8 264 aa11.03□□□□□ -0.64
COL9A1-204ENST00000370496 SCGB1C1Q8TD33 95 aa11.03□□□□□ -0.64
COL9A1-204ENST00000370496 AQP10Q96PS8 301 aa11.03□□□□□ -0.64
COL9A1-204ENST00000370496 LOC102724200A0A096LPH7 203 aaPredicted RBP11.02□□□□□ -0.65
COL9A1-204ENST00000370496 RBMY1BA6NDE4 496 aaKnown RBP11.02□□□□□ -0.65
COL9A1-204ENST00000370496 RBMY1EA6NEQ0 496 aaKnown RBP11.02□□□□□ -0.65
COL9A1-204ENST00000370496 RBMY1DP0C7P1 496 aaKnown RBP11.02□□□□□ -0.65
COL9A1-204ENST00000370496 MEOX2P50222 304 aa11.02□□□□□ -0.65
COL9A1-204ENST00000370496 ZNF124Q15973 351 aa11.02□□□□□ -0.65
COL9A1-204ENST00000370496 PSMG4Q5JS54 123 aa11.02□□□□□ -0.65
COL9A1-204ENST00000370496 SAMD13Q5VXD3 122 aa11.02□□□□□ -0.65
COL9A1-204ENST00000370496 PATE2Q6UY27 113 aa11.02□□□□□ -0.65
COL9A1-204ENST00000370496 CHAC2Q8WUX2 184 aa11.02□□□□□ -0.65
COL9A1-204ENST00000370496 CITED4Q96RK1 184 aa11.02□□□□□ -0.65
COL9A1-204ENST00000370496 PLA2G2EQ9NZK7 142 aa11.02□□□□□ -0.65
COL9A1-204ENST00000370496 NHLRC4P0CG21 123 aaPredicted RBP11.01□□□□□ -0.65
COL9A1-204ENST00000370496 ID1P41134 155 aa11.01□□□□□ -0.65
COL9A1-204ENST00000370496 ZNF266Q14584 549 aa11.01□□□□□ -0.65
COL9A1-204ENST00000370496 TMEM37Q8WXS4 190 aa11.01□□□□□ -0.65
COL9A1-204ENST00000370496 RSG1Q9BU20 258 aa11.01□□□□□ -0.65
COL9A1-204ENST00000370496 ZMAT4Q9H898 229 aa11.01□□□□□ -0.65
COL9A1-204ENST00000370496 DNAJC4Q9NNZ3 241 aa11.01□□□□□ -0.65
COL9A1-204ENST00000370496 RPL35AP18077 110 aaKnown RBP11□□□□□ -0.65
COL9A1-204ENST00000370496 PSMB3P49720 205 aa11□□□□□ -0.65
COL9A1-204ENST00000370496 APOC4P55056 127 aa11□□□□□ -0.65
COL9A1-204ENST00000370496 HAGHQ16775 308 aa11□□□□□ -0.65
COL9A1-204ENST00000370496 C16orf92Q96LL3 132 aa11□□□□□ -0.65
COL9A1-204ENST00000370496 TNFSF18Q9UNG2 199 aa11□□□□□ -0.65
COL9A1-204ENST00000370496 TGP01266 2768 aa10.99□□□□□ -0.65
COL9A1-204ENST00000370496 RNF222A6NCQ9 220 aa10.99□□□□□ -0.65
COL9A1-204ENST00000370496 G3V3Q6 166 aa10.99□□□□□ -0.65
COL9A1-204ENST00000370496 SMLR1H3BR10 107 aa10.99□□□□□ -0.65
COL9A1-204ENST00000370496 ARPC5O15511 151 aa10.99□□□□□ -0.65
COL9A1-204ENST00000370496 BPIFA4PQ86YQ2 179 aa10.99□□□□□ -0.65
COL9A1-204ENST00000370496 STHQ8IWL8 128 aa10.99□□□□□ -0.65
COL9A1-204ENST00000370496 GATAD1Q8WUU5 269 aa10.99□□□□□ -0.65
COL9A1-204ENST00000370496 LINC00052Q96N35 136 aa10.99□□□□□ -0.65
COL9A1-204ENST00000370496 SPATA25Q9BR10 227 aa10.99□□□□□ -0.65
COL9A1-204ENST00000370496 PARD6GQ9BYG4 376 aaPredicted RBP10.99□□□□□ -0.65
COL9A1-204ENST00000370496 WFDC1Q9HC57 220 aa10.99□□□□□ -0.65
COL9A1-204ENST00000370496 SEPSECSQ9HD40 501 aaKnown RBP10.99□□□□□ -0.65
COL9A1-204ENST00000370496 ISLRO14498 428 aa10.98□□□□□ -0.65
COL9A1-204ENST00000370496 SOCS3O14543 225 aa10.98□□□□□ -0.65
COL9A1-204ENST00000370496 GCSAMLQ5JQS6 135 aa10.98□□□□□ -0.65
COL9A1-204ENST00000370496 FFAR4Q5NUL3 377 aa10.98□□□□□ -0.65
COL9A1-204ENST00000370496 MORN5Q5VZ52 161 aa10.98□□□□□ -0.65
COL9A1-204ENST00000370496 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.98□□□□□ -0.65
COL9A1-204ENST00000370496 LINC00322Q6ZN03 302 aaPredicted RBP10.98□□□□□ -0.65
COL9A1-204ENST00000370496 Q6ZNX1 250 aa10.98□□□□□ -0.65
COL9A1-204ENST00000370496 TM2D3Q9BRN9 247 aa10.98□□□□□ -0.65
COL9A1-204ENST00000370496 hCG_2014768A0A024R1R8 64 aa10.97□□□□□ -0.65
COL9A1-204ENST00000370496 ACTL10Q5JWF8 245 aa10.97□□□□□ -0.65
COL9A1-204ENST00000370496 FAM78BQ5VT40 261 aa10.97□□□□□ -0.65
COL9A1-204ENST00000370496 LRRC20Q8TCA0 184 aa10.97□□□□□ -0.65
COL9A1-204ENST00000370496 A0A087X0K7 114 aa10.96□□□□□ -0.65
COL9A1-204ENST00000370496 KNCNA6PVL3 124 aa10.96□□□□□ -0.65
COL9A1-204ENST00000370496 LCN15Q6UWW0 184 aa10.96□□□□□ -0.65
COL9A1-204ENST00000370496 HSD17B11Q8NBQ5 300 aa10.96□□□□□ -0.65
COL9A1-204ENST00000370496 U3KQK5 164 aa10.96□□□□□ -0.65
COL9A1-204ENST00000370496 BORCS7-ASMTA0A0B4J1R7 106 aa10.95□□□□□ -0.66
COL9A1-204ENST00000370496 TRAV5A0A0B4J249 113 aa10.95□□□□□ -0.66
COL9A1-204ENST00000370496 KIR2DL5BA0A0G2JN68 375 aa10.95□□□□□ -0.66
COL9A1-204ENST00000370496 KIR2DL5BA0A0G2JPC4 375 aa10.95□□□□□ -0.66
COL9A1-204ENST00000370496 KIR2DL5AQ8N109 375 aa10.95□□□□□ -0.66
COL9A1-204ENST00000370496 KIR2DL5BQ8NHK3 375 aa10.95□□□□□ -0.66
COL9A1-204ENST00000370496 RCHY1Q96PM5 261 aa10.95□□□□□ -0.66
COL9A1-204ENST00000370496 MRPL32Q9BYC8 188 aaKnown RBP10.95□□□□□ -0.66
COL9A1-204ENST00000370496 MFFQ9GZY8 342 aa10.95□□□□□ -0.66
COL9A1-204ENST00000370496 RETNQ9HD89 108 aa10.95□□□□□ -0.66
COL9A1-204ENST00000370496 RPRMQ9NS64 109 aa10.95□□□□□ -0.66
COL9A1-204ENST00000370496 TIMM9Q9Y5J7 89 aa10.95□□□□□ -0.66
COL9A1-204ENST00000370496 COL7A1Q02388 2944 aa10.95□□□□□ -0.66
COL9A1-204ENST00000370496 MRPS12O15235 138 aaKnown RBP10.94□□□□□ -0.66
COL9A1-204ENST00000370496 SNRPCP09234 159 aaKnown RBP10.94□□□□□ -0.66
COL9A1-204ENST00000370496 CXCL2P19875 107 aa10.94□□□□□ -0.66
COL9A1-204ENST00000370496 RNF182Q8N6D2 247 aa10.94□□□□□ -0.66
COL9A1-204ENST00000370496 C17orf77Q96MU5 243 aa10.94□□□□□ -0.66
COL9A1-204ENST00000370496 FUT9Q9Y231 359 aa10.94□□□□□ -0.66
COL9A1-204ENST00000370496 DNAH9Q9NYC9 4486 aa10.94□□□□□ -0.66
COL9A1-204ENST00000370496 H3BTX0 84 aa10.93□□□□□ -0.66
COL9A1-204ENST00000370496 UBE2CO00762 179 aa10.93□□□□□ -0.66
COL9A1-204ENST00000370496 CA1P00915 261 aaPredicted RBP10.93□□□□□ -0.66
COL9A1-204ENST00000370496 IGLC2P0DOY2 106 aa10.93□□□□□ -0.66
COL9A1-204ENST00000370496 RHOBP62745 196 aa10.93□□□□□ -0.66
COL9A1-204ENST00000370496 DEFB135Q30KP9 77 aa10.93□□□□□ -0.66
COL9A1-204ENST00000370496 SPATA31B1PQ5VZV4 182 aa10.93□□□□□ -0.66
COL9A1-204ENST00000370496 RPL7L1Q6DKI1 246 aaKnown RBP10.93□□□□□ -0.66
COL9A1-204ENST00000370496 FOXI2Q6ZQN5 318 aa10.93□□□□□ -0.66
COL9A1-204ENST00000370496 MIR17HGQ75NE6 70 aa10.93□□□□□ -0.66
COL9A1-204ENST00000370496 TRPT1Q86TN4 253 aaKnown RBP10.93□□□□□ -0.66
COL9A1-204ENST00000370496 ZNF738Q8NE65 137 aa10.93□□□□□ -0.66
COL9A1-204ENST00000370496 SLC50A1Q9BRV3 221 aa10.93□□□□□ -0.66
COL9A1-204ENST00000370496 SLC25A2Q9BXI2 301 aa10.93□□□□□ -0.66
COL9A1-204ENST00000370496 OR7C2O60412 319 aa10.92□□□□□ -0.66
COL9A1-204ENST00000370496 HLA-DRB4P13762 266 aa10.92□□□□□ -0.66
COL9A1-204ENST00000370496 ATP6V0CP27449 155 aa10.92□□□□□ -0.66
COL9A1-204ENST00000370496 DEFB1P60022 68 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms