RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 LINC01356Q8N9X3 169 aa4.27□□□□□ -1.73
SMNDC1-202ENST00000369603 THAP8Q8NA92 274 aa4.27□□□□□ -1.73
SMNDC1-202ENST00000369603 FAM110DQ8TAY7 271 aaPredicted RBP4.27□□□□□ -1.73
SMNDC1-202ENST00000369603 TSKUQ8WUA8 353 aa4.27□□□□□ -1.73
SMNDC1-202ENST00000369603 SCRT1Q9BWW7 348 aa4.27□□□□□ -1.73
SMNDC1-202ENST00000369603 C11orf1Q9H5F2 150 aa4.27□□□□□ -1.73
SMNDC1-202ENST00000369603 ADAMTS20P59510 1910 aa4.27□□□□□ -1.73
SMNDC1-202ENST00000369603 DYSFO75923 2080 aa4.27□□□□□ -1.73
SMNDC1-202ENST00000369603 IGHV3OR16-13A0A075B7E8 117 aa4.27□□□□□ -1.73
SMNDC1-202ENST00000369603 IGHV3-74A0A0B4J1X5 117 aa4.27□□□□□ -1.73
SMNDC1-202ENST00000369603 IGHV1-69DA0A0B4J2H0 117 aa4.27□□□□□ -1.73
SMNDC1-202ENST00000369603 PMS2P5A8MQ11 134 aa4.27□□□□□ -1.73
SMNDC1-202ENST00000369603 NPIPB5A8MRT5 1133 aa4.27□□□□□ -1.73
SMNDC1-202ENST00000369603 H3BUX3 64 aa4.27□□□□□ -1.73
SMNDC1-202ENST00000369603 IGHV1-69P01742 117 aa4.27□□□□□ -1.73
SMNDC1-202ENST00000369603 NPSP0C0P6 89 aa4.27□□□□□ -1.73
SMNDC1-202ENST00000369603 ERASQ7Z444 233 aa4.27□□□□□ -1.73
SMNDC1-202ENST00000369603 SHANK2-AS3Q9BTD1 123 aa4.27□□□□□ -1.73
SMNDC1-202ENST00000369603 LSM4Q9Y4Z0 139 aaKnown RBP4.27□□□□□ -1.73
SMNDC1-202ENST00000369603 ARHGAP21Q5T5U3 1957 aa4.26□□□□□ -1.73
SMNDC1-202ENST00000369603 SH2D7A6NKC9 451 aaPredicted RBP4.26□□□□□ -1.73
SMNDC1-202ENST00000369603 CGB1A6NKQ9 187 aa4.26□□□□□ -1.73
SMNDC1-202ENST00000369603 FABP5P3A8MUU1 101 aa4.26□□□□□ -1.73
SMNDC1-202ENST00000369603 INS-IGF2F8WCM5 200 aa4.26□□□□□ -1.73
SMNDC1-202ENST00000369603 P0C879 139 aa4.26□□□□□ -1.73
SMNDC1-202ENST00000369603 KLF17Q5JT82 389 aaPredicted RBP4.26□□□□□ -1.73
SMNDC1-202ENST00000369603 SYT8Q8NBV8 401 aa4.26□□□□□ -1.73
SMNDC1-202ENST00000369603 ST6GALNAC6Q969X2 333 aa4.26□□□□□ -1.73
SMNDC1-202ENST00000369603 ALKBH7Q9BT30 221 aaPredicted RBP4.26□□□□□ -1.73
SMNDC1-202ENST00000369603 ACACBO00763 2458 aa4.26□□□□□ -1.73
SMNDC1-202ENST00000369603 TNRC6AQ8NDV7 1962 aaKnown RBP4.26□□□□□ -1.73
SMNDC1-202ENST00000369603 J3QR89 54 aa4.26□□□□□ -1.73
SMNDC1-202ENST00000369603 ZNF207O43670 478 aaKnown RBP4.26□□□□□ -1.73
SMNDC1-202ENST00000369603 NDUFB8O95169 186 aa4.26□□□□□ -1.73
SMNDC1-202ENST00000369603 PRSS1P07477 247 aa4.26□□□□□ -1.73
SMNDC1-202ENST00000369603 CNTFRP26992 372 aa4.26□□□□□ -1.73
SMNDC1-202ENST00000369603 FCER1GP30273 86 aa4.26□□□□□ -1.73
SMNDC1-202ENST00000369603 RPL24P83731 157 aaKnown RBP4.26□□□□□ -1.73
SMNDC1-202ENST00000369603 DIAPH2-AS1Q14236 149 aa4.26□□□□□ -1.73
SMNDC1-202ENST00000369603 SLC25A34Q6PIV7 304 aa4.26□□□□□ -1.73
SMNDC1-202ENST00000369603 C12orf54Q6X4T0 127 aa4.26□□□□□ -1.73
SMNDC1-202ENST00000369603 OR4X2Q8NGF9 303 aa4.26□□□□□ -1.73
SMNDC1-202ENST00000369603 C5orf30Q96GV9 206 aa4.26□□□□□ -1.73
SMNDC1-202ENST00000369603 KCNS1Q96KK3 526 aa4.26□□□□□ -1.73
SMNDC1-202ENST00000369603 MAP1LC3AQ9H492 121 aa4.26□□□□□ -1.73
SMNDC1-202ENST00000369603 PHLDA3Q9Y5J5 127 aa4.26□□□□□ -1.73
SMNDC1-202ENST00000369603 IGHV3-49A0A0A0MS15 119 aa4.26□□□□□ -1.73
SMNDC1-202ENST00000369603 LEPROTL1O95214 131 aa4.26□□□□□ -1.73
SMNDC1-202ENST00000369603 HIST1H1AQ02539 215 aaPredicted RBP4.26□□□□□ -1.73
SMNDC1-202ENST00000369603 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.26□□□□□ -1.73
SMNDC1-202ENST00000369603 TMEM219Q86XT9 240 aa4.26□□□□□ -1.73
SMNDC1-202ENST00000369603 C11orf52Q96A22 123 aa4.26□□□□□ -1.73
SMNDC1-202ENST00000369603 IGLC7A0M8Q6 106 aa4.25□□□□□ -1.73
SMNDC1-202ENST00000369603 IGHV3-11P01762 117 aa4.25□□□□□ -1.73
SMNDC1-202ENST00000369603 SP5Q6BEB4 398 aaPredicted RBP4.25□□□□□ -1.73
SMNDC1-202ENST00000369603 BRD3OSQ6XYD6 125 aa4.25□□□□□ -1.73
SMNDC1-202ENST00000369603 ZNF114Q8NC26 417 aa4.25□□□□□ -1.73
SMNDC1-202ENST00000369603 OR10AG1Q8NH19 301 aa4.25□□□□□ -1.73
SMNDC1-202ENST00000369603 ITLN2Q8WWU7 325 aaPredicted RBP4.25□□□□□ -1.73
SMNDC1-202ENST00000369603 TPSG1Q9NRR2 321 aa4.25□□□□□ -1.73
SMNDC1-202ENST00000369603 IGHV3OR16-8A0A075B7F1 116 aa4.25□□□□□ -1.73
SMNDC1-202ENST00000369603 IGHV3-66A0A0C4DH42 116 aa4.25□□□□□ -1.73
SMNDC1-202ENST00000369603 GAGE10A6NGK3 116 aa4.25□□□□□ -1.73
SMNDC1-202ENST00000369603 J3QLI3 93 aa4.25□□□□□ -1.73
SMNDC1-202ENST00000369603 ZNF324O75467 553 aaPredicted RBP4.25□□□□□ -1.73
SMNDC1-202ENST00000369603 IGLV1-47P01700 117 aa4.25□□□□□ -1.73
SMNDC1-202ENST00000369603 MGPP08493 103 aa4.25□□□□□ -1.73
SMNDC1-202ENST00000369603 PAX1P15863 534 aa4.25□□□□□ -1.73
SMNDC1-202ENST00000369603 BTF3P20290 206 aaKnown RBP4.25□□□□□ -1.73
SMNDC1-202ENST00000369603 UQCRFS1P47985 274 aa4.25□□□□□ -1.73
SMNDC1-202ENST00000369603 ZNF329Q86UD4 541 aa4.25□□□□□ -1.73
SMNDC1-202ENST00000369603 ODF3L1Q8IXM7 274 aa4.25□□□□□ -1.73
SMNDC1-202ENST00000369603 FER1L6-AS1Q8NA97 138 aa4.25□□□□□ -1.73
SMNDC1-202ENST00000369603 NUDT10Q8NFP7 164 aa4.25□□□□□ -1.73
SMNDC1-202ENST00000369603 MYOZ3Q8TDC0 251 aa4.25□□□□□ -1.73
SMNDC1-202ENST00000369603 NUDT11Q96G61 164 aa4.25□□□□□ -1.73
SMNDC1-202ENST00000369603 TMEM14CQ9P0S9 112 aa4.25□□□□□ -1.73
SMNDC1-202ENST00000369603 TNRC6BQ9UPQ9 1833 aaKnown RBP4.25□□□□□ -1.73
SMNDC1-202ENST00000369603 FAM208BQ5VWN6 2430 aa4.25□□□□□ -1.73
SMNDC1-202ENST00000369603 OVOL1O14753 267 aa4.25□□□□□ -1.73
SMNDC1-202ENST00000369603 NUDT3O95989 172 aa4.25□□□□□ -1.73
SMNDC1-202ENST00000369603 FOXA3P55318 350 aaPredicted RBP4.25□□□□□ -1.73
SMNDC1-202ENST00000369603 TCTAP57738 103 aa4.25□□□□□ -1.73
SMNDC1-202ENST00000369603 FAM159AQ6UWV7 190 aa4.25□□□□□ -1.73
SMNDC1-202ENST00000369603 ARL6IP6Q8N6S5 226 aa4.25□□□□□ -1.73
SMNDC1-202ENST00000369603 NEU1Q99519 415 aa4.25□□□□□ -1.73
SMNDC1-202ENST00000369603 C20orf144Q9BQM9 153 aa4.25□□□□□ -1.73
SMNDC1-202ENST00000369603 PRORYQ9H606 182 aa4.25□□□□□ -1.73
SMNDC1-202ENST00000369603 AP5S1Q9NUS5 200 aa4.25□□□□□ -1.73
SMNDC1-202ENST00000369603 KIAA1549Q9HCM3 1950 aa4.25□□□□□ -1.73
SMNDC1-202ENST00000369603 A6NDN8 102 aa4.25□□□□□ -1.73
SMNDC1-202ENST00000369603 PPP1R17O96001 155 aa4.25□□□□□ -1.73
SMNDC1-202ENST00000369603 OR10J3Q5JRS4 329 aa4.25□□□□□ -1.73
SMNDC1-202ENST00000369603 SIGLEC15Q6ZMC9 328 aa4.25□□□□□ -1.73
SMNDC1-202ENST00000369603 TMEM136Q6ZRR5 245 aa4.25□□□□□ -1.73
SMNDC1-202ENST00000369603 ZNF418Q8TF45 676 aaPredicted RBP4.25□□□□□ -1.73
SMNDC1-202ENST00000369603 TMEM70Q9BUB7 260 aa4.25□□□□□ -1.73
SMNDC1-202ENST00000369603 PEMTQ9UBM1 199 aa4.25□□□□□ -1.73
SMNDC1-202ENST00000369603 TLN1Q9Y490 2541 aaKnown RBP4.24□□□□□ -1.73
SMNDC1-202ENST00000369603 CHD7Q9P2D1 2997 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms