RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 ELOVL1Q9BW60 279 aa12.96□□□□□ -0.33
PHGDH-202ENST00000369409 RPS10P5Q9NQ39 176 aa12.96□□□□□ -0.33
PHGDH-202ENST00000369409 SERTAD4Q9NUC0 356 aa12.96□□□□□ -0.33
PHGDH-202ENST00000369409 ZNF586Q9NXT0 402 aa12.96□□□□□ -0.33
PHGDH-202ENST00000369409 HIST1H1EP10412 219 aaKnown RBP12.95□□□□□ -0.34
PHGDH-202ENST00000369409 CRYBB3P26998 211 aa12.95□□□□□ -0.34
PHGDH-202ENST00000369409 RHEBQ15382 184 aa12.95□□□□□ -0.34
PHGDH-202ENST00000369409 TEX38Q6PEX7 206 aa12.95□□□□□ -0.34
PHGDH-202ENST00000369409 CBLN2Q8IUK8 224 aa12.95□□□□□ -0.34
PHGDH-202ENST00000369409 OR4F17Q8NGA8 305 aa12.95□□□□□ -0.34
PHGDH-202ENST00000369409 OR5B12Q96R08 314 aa12.95□□□□□ -0.34
PHGDH-202ENST00000369409 SDF2L1Q9HCN8 221 aa12.95□□□□□ -0.34
PHGDH-202ENST00000369409 HIVEP2P31629 2446 aa12.95□□□□□ -0.34
PHGDH-202ENST00000369409 CLPSL1A2RUU4 121 aa12.95□□□□□ -0.34
PHGDH-202ENST00000369409 DNASE2O00115 360 aaPredicted RBP12.95□□□□□ -0.34
PHGDH-202ENST00000369409 MRPS12O15235 138 aaKnown RBP12.95□□□□□ -0.34
PHGDH-202ENST00000369409 RPLP1P05386 114 aaKnown RBP12.95□□□□□ -0.34
PHGDH-202ENST00000369409 RPL15P61313 204 aaKnown RBP12.95□□□□□ -0.34
PHGDH-202ENST00000369409 PNRC1Q12796 327 aaPredicted RBP12.95□□□□□ -0.34
PHGDH-202ENST00000369409 CUBNO60494 3623 aa12.94□□□□□ -0.34
PHGDH-202ENST00000369409 ZNF207O43670 478 aaKnown RBP12.94□□□□□ -0.34
PHGDH-202ENST00000369409 IGLC2P0DOY2 106 aa12.94□□□□□ -0.34
PHGDH-202ENST00000369409 FOXE3Q13461 319 aa12.94□□□□□ -0.34
PHGDH-202ENST00000369409 ADIRFQ15847 76 aa12.94□□□□□ -0.34
PHGDH-202ENST00000369409 TMEM241Q24JQ0 296 aa12.94□□□□□ -0.34
PHGDH-202ENST00000369409 MYCNOSP40205 109 aa12.93□□□□□ -0.34
PHGDH-202ENST00000369409 Q6ZSV7 163 aa12.93□□□□□ -0.34
PHGDH-202ENST00000369409 Q9H3A6 140 aa12.93□□□□□ -0.34
PHGDH-202ENST00000369409 CDC42EP3Q9UKI2 254 aa12.93□□□□□ -0.34
PHGDH-202ENST00000369409 ELANEP08246 267 aa12.93□□□□□ -0.34
PHGDH-202ENST00000369409 S100A7P31151 101 aa12.93□□□□□ -0.34
PHGDH-202ENST00000369409 Q71RC1 249 aaPredicted RBP12.93□□□□□ -0.34
PHGDH-202ENST00000369409 OR8I2Q8N0Y5 310 aa12.93□□□□□ -0.34
PHGDH-202ENST00000369409 C17orf77Q96MU5 243 aa12.93□□□□□ -0.34
PHGDH-202ENST00000369409 METTL26Q96S19 204 aa12.93□□□□□ -0.34
PHGDH-202ENST00000369409 TRBV20OR9-2A0A075B6H5 130 aa12.92□□□□□ -0.34
PHGDH-202ENST00000369409 TRBV19A0A075B6N1 114 aa12.92□□□□□ -0.34
PHGDH-202ENST00000369409 CLDN34H7C241 214 aa12.92□□□□□ -0.34
PHGDH-202ENST00000369409 NDUFA4O00483 81 aa12.92□□□□□ -0.34
PHGDH-202ENST00000369409 RPL7P18124 248 aaKnown RBP12.92□□□□□ -0.34
PHGDH-202ENST00000369409 RPL35P42766 123 aaKnown RBP12.92□□□□□ -0.34
PHGDH-202ENST00000369409 RPL23P62829 140 aaKnown RBP12.92□□□□□ -0.34
PHGDH-202ENST00000369409 GNG5P63218 68 aa12.92□□□□□ -0.34
PHGDH-202ENST00000369409 FAM209BQ5JX69 171 aa12.92□□□□□ -0.34
PHGDH-202ENST00000369409 UNQ9165/PRO28630Q6UXU0 137 aa12.92□□□□□ -0.34
PHGDH-202ENST00000369409 C2CD4CQ8TF44 421 aa12.92□□□□□ -0.34
PHGDH-202ENST00000369409 PEF1Q9UBV8 284 aaKnown RBP12.92□□□□□ -0.34
PHGDH-202ENST00000369409 RNF24Q9Y225 148 aa12.92□□□□□ -0.34
PHGDH-202ENST00000369409 IGHV3OR16-13A0A075B7E8 117 aa12.91□□□□□ -0.34
PHGDH-202ENST00000369409 IGHV3-49A0A0A0MS15 119 aa12.91□□□□□ -0.34
PHGDH-202ENST00000369409 IGHV3-74A0A0B4J1X5 117 aa12.91□□□□□ -0.34
PHGDH-202ENST00000369409 IGHV3-66A0A0C4DH42 116 aa12.91□□□□□ -0.34
PHGDH-202ENST00000369409 PGPA6NDG6 321 aa12.91□□□□□ -0.34
PHGDH-202ENST00000369409 PGPEP1LA6NFU8 196 aa12.91□□□□□ -0.34
PHGDH-202ENST00000369409 SLC17A3O00476 420 aa12.91□□□□□ -0.34
PHGDH-202ENST00000369409 SLC25A5P05141 298 aaKnown RBP12.91□□□□□ -0.34
PHGDH-202ENST00000369409 MYOZ3Q8TDC0 251 aa12.91□□□□□ -0.34
PHGDH-202ENST00000369409 ZNF418Q8TF45 676 aaPredicted RBP12.91□□□□□ -0.34
PHGDH-202ENST00000369409 PEX7O00628 323 aa12.91□□□□□ -0.34
PHGDH-202ENST00000369409 BUB3O43684 328 aa12.91□□□□□ -0.34
PHGDH-202ENST00000369409 GGCTO75223 188 aaKnown RBP12.91□□□□□ -0.34
PHGDH-202ENST00000369409 APOHP02749 345 aaPredicted RBP12.91□□□□□ -0.34
PHGDH-202ENST00000369409 KLHDC1Q8N7A1 406 aa12.91□□□□□ -0.34
PHGDH-202ENST00000369409 RPH3ALQ9UNE2 315 aa12.91□□□□□ -0.34
PHGDH-202ENST00000369409 RNASE1P07998 156 aaKnown RBP12.9□□□□□ -0.34
PHGDH-202ENST00000369409 CD99P14209 185 aa12.9□□□□□ -0.34
PHGDH-202ENST00000369409 EXOC3-AS1Q8N2X6 119 aa12.9□□□□□ -0.34
PHGDH-202ENST00000369409 RNF152Q8N8N0 203 aa12.9□□□□□ -0.34
PHGDH-202ENST00000369409 OTORQ9NRC9 128 aa12.9□□□□□ -0.34
PHGDH-202ENST00000369409 AURKAIP1Q9NWT8 199 aaPredicted RBP12.9□□□□□ -0.34
PHGDH-202ENST00000369409 B4DEV8 164 aa12.89□□□□□ -0.35
PHGDH-202ENST00000369409 HILS1P60008 231 aa12.89□□□□□ -0.35
PHGDH-202ENST00000369409 LINC01551Q86U37 167 aa12.89□□□□□ -0.35
PHGDH-202ENST00000369409 C5orf17Q8NAS9 161 aa12.89□□□□□ -0.35
PHGDH-202ENST00000369409 TMEM190Q8WZ59 177 aa12.89□□□□□ -0.35
PHGDH-202ENST00000369409 TCEAL7Q9BRU2 100 aa12.89□□□□□ -0.35
PHGDH-202ENST00000369409 HELTA6NFD8 242 aa12.89□□□□□ -0.35
PHGDH-202ENST00000369409 CRYBA1P05813 215 aa12.89□□□□□ -0.35
PHGDH-202ENST00000369409 LGALS1P09382 135 aaKnown RBP12.89□□□□□ -0.35
PHGDH-202ENST00000369409 ATF4P18848 351 aaPredicted RBP12.89□□□□□ -0.35
PHGDH-202ENST00000369409 CENPWQ5EE01 88 aa12.89□□□□□ -0.35
PHGDH-202ENST00000369409 SIGLEC15Q6ZMC9 328 aa12.89□□□□□ -0.35
PHGDH-202ENST00000369409 SMCO4Q9NRQ5 59 aa12.89□□□□□ -0.35
PHGDH-202ENST00000369409 EPDR1Q9UM22 224 aa12.89□□□□□ -0.35
PHGDH-202ENST00000369409 A0A087WWC5 75 aa12.88□□□□□ -0.35
PHGDH-202ENST00000369409 ZNF320A2RRD8 509 aa12.88□□□□□ -0.35
PHGDH-202ENST00000369409 C9JCJ5 164 aa12.88□□□□□ -0.35
PHGDH-202ENST00000369409 INAFM1C9JVW0 142 aa12.88□□□□□ -0.35
PHGDH-202ENST00000369409 CNN1P51911 297 aaKnown RBP12.88□□□□□ -0.35
PHGDH-202ENST00000369409 PDE6HQ13956 83 aa12.88□□□□□ -0.35
PHGDH-202ENST00000369409 HIST1H2BAQ96A08 127 aa12.88□□□□□ -0.35
PHGDH-202ENST00000369409 UBE2E2Q96LR5 201 aa12.88□□□□□ -0.35
PHGDH-202ENST00000369409 LINC00479Q96M42 142 aa12.88□□□□□ -0.35
PHGDH-202ENST00000369409 SMAD5-AS1Q9Y6J3 95 aa12.88□□□□□ -0.35
PHGDH-202ENST00000369409 U3KQE9 123 aa12.88□□□□□ -0.35
PHGDH-202ENST00000369409 FLNBO75369 2602 aaKnown RBP12.88□□□□□ -0.35
PHGDH-202ENST00000369409 NF1P21359 2839 aa12.87□□□□□ -0.35
PHGDH-202ENST00000369409 GNG4P50150 75 aa12.87□□□□□ -0.35
PHGDH-202ENST00000369409 RNF212Q495C1 297 aa12.87□□□□□ -0.35
PHGDH-202ENST00000369409 ISOC2Q96AB3 205 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms