RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 A0A1W2PRE2 83 aa18.33■□□□□ 0.52
SNX3-203ENST00000368979 OR4F5Q8NH21 305 aa18.33■□□□□ 0.52
SNX3-203ENST00000368979 TMEM190Q8WZ59 177 aa18.33■□□□□ 0.52
SNX3-203ENST00000368979 OR4F4Q96R69 305 aa18.33■□□□□ 0.52
SNX3-203ENST00000368979 NSD1Q96L73 2696 aaPredicted RBP18.32■□□□□ 0.52
SNX3-203ENST00000368979 CRYBB3P26998 211 aa18.32■□□□□ 0.52
SNX3-203ENST00000368979 CDX1P47902 265 aaPredicted RBP18.32■□□□□ 0.52
SNX3-203ENST00000368979 METTL26Q96S19 204 aa18.32■□□□□ 0.52
SNX3-203ENST00000368979 U3KQE9 123 aa18.32■□□□□ 0.52
SNX3-203ENST00000368979 TMEM250H0YL14 139 aa18.31■□□□□ 0.52
SNX3-203ENST00000368979 NBEAP1P0C6P0 100 aa18.31■□□□□ 0.52
SNX3-203ENST00000368979 HIST1H1EP10412 219 aaKnown RBP18.31■□□□□ 0.52
SNX3-203ENST00000368979 C20orf24Q9BUV8 137 aa18.31■□□□□ 0.52
SNX3-203ENST00000368979 BUB3O43684 328 aa18.3■□□□□ 0.52
SNX3-203ENST00000368979 PDE6DO43924 150 aa18.3■□□□□ 0.52
SNX3-203ENST00000368979 IGLC2P0DOY2 106 aa18.3■□□□□ 0.52
SNX3-203ENST00000368979 FAM90A2PQ658T7 463 aa18.3■□□□□ 0.52
SNX3-203ENST00000368979 GPHB5Q86YW7 130 aa18.3■□□□□ 0.52
SNX3-203ENST00000368979 CCDC28AQ8IWP9 274 aa18.3■□□□□ 0.52
SNX3-203ENST00000368979 FN1P02751 2386 aaKnown RBP18.3■□□□□ 0.52
SNX3-203ENST00000368979 C2CD3Q4AC94 2353 aa18.3■□□□□ 0.52
SNX3-203ENST00000368979 GGTLC3B5MD39 225 aa18.29■□□□□ 0.52
SNX3-203ENST00000368979 H3BQ15 152 aa18.29■□□□□ 0.52
SNX3-203ENST00000368979 NPPCP23582 126 aa18.29■□□□□ 0.52
SNX3-203ENST00000368979 SOHLH1Q5JUK2 328 aa18.29■□□□□ 0.52
SNX3-203ENST00000368979 OR4F17Q8NGA8 305 aa18.29■□□□□ 0.52
SNX3-203ENST00000368979 ZNF586Q9NXT0 402 aa18.29■□□□□ 0.52
SNX3-203ENST00000368979 F6UZH7 168 aa18.28■□□□□ 0.52
SNX3-203ENST00000368979 ZNF207O43670 478 aaKnown RBP18.28■□□□□ 0.52
SNX3-203ENST00000368979 APOC3P02656 99 aa18.28■□□□□ 0.52
SNX3-203ENST00000368979 SNRPCP09234 159 aaKnown RBP18.28■□□□□ 0.52
SNX3-203ENST00000368979 RPL7P18124 248 aaKnown RBP18.28■□□□□ 0.52
SNX3-203ENST00000368979 CEBPGP53567 150 aa18.28■□□□□ 0.52
SNX3-203ENST00000368979 C18orf65Q6ZTR6 163 aa18.28■□□□□ 0.52
SNX3-203ENST00000368979 BLNKQ8WV28 456 aa18.28■□□□□ 0.52
SNX3-203ENST00000368979 C4orf3Q8WVX3 66 aa18.28■□□□□ 0.52
SNX3-203ENST00000368979 WFDC12Q8WWY7 111 aa18.28■□□□□ 0.52
SNX3-203ENST00000368979 IGHV4OR15-8A0A075B7B6 117 aa18.28■□□□□ 0.52
SNX3-203ENST00000368979 A0A087WW49 117 aa18.28■□□□□ 0.52
SNX3-203ENST00000368979 APOHP02749 345 aaPredicted RBP18.28■□□□□ 0.52
SNX3-203ENST00000368979 NKX6-2Q9C056 277 aaPredicted RBP18.28■□□□□ 0.52
SNX3-203ENST00000368979 MYCNOSP40205 109 aa18.27■□□□□ 0.51
SNX3-203ENST00000368979 RPEL1Q2QD12 228 aa18.27■□□□□ 0.51
SNX3-203ENST00000368979 FAM106AQ4KMX7 169 aa18.27■□□□□ 0.51
SNX3-203ENST00000368979 C1orf194Q5T5A4 169 aa18.27■□□□□ 0.51
SNX3-203ENST00000368979 OR8I2Q8N0Y5 310 aa18.27■□□□□ 0.51
SNX3-203ENST00000368979 TRBV19A0A075B6N1 114 aa18.26■□□□□ 0.51
SNX3-203ENST00000368979 SRSF2Q01130 221 aaKnown RBP18.26■□□□□ 0.51
SNX3-203ENST00000368979 GUCA2BQ16661 112 aa18.26■□□□□ 0.51
SNX3-203ENST00000368979 C11orf52Q96A22 123 aa18.26■□□□□ 0.51
SNX3-203ENST00000368979 RNF114Q9Y508 228 aa18.26■□□□□ 0.51
SNX3-203ENST00000368979 SCO2A0A1W2PP80 73 aa18.25■□□□□ 0.51
SNX3-203ENST00000368979 ZNF320A2RRD8 509 aa18.25■□□□□ 0.51
SNX3-203ENST00000368979 H3BTX0 84 aa18.25■□□□□ 0.51
SNX3-203ENST00000368979 K7EMT4 169 aa18.25■□□□□ 0.51
SNX3-203ENST00000368979 RIPPLY3P57055 190 aa18.25■□□□□ 0.51
SNX3-203ENST00000368979 PROK1P58294 105 aa18.25■□□□□ 0.51
SNX3-203ENST00000368979 SUMO1P63165 101 aaKnown RBP18.25■□□□□ 0.51
SNX3-203ENST00000368979 GPR82Q96P67 336 aa18.25■□□□□ 0.51
SNX3-203ENST00000368979 SMAD5-AS1Q9Y6J3 95 aa18.25■□□□□ 0.51
SNX3-203ENST00000368979 NDUFB4O95168 129 aa18.24■□□□□ 0.51
SNX3-203ENST00000368979 CD28P10747 220 aa18.24■□□□□ 0.51
SNX3-203ENST00000368979 RANP62826 216 aaKnown RBP18.24■□□□□ 0.51
SNX3-203ENST00000368979 KHDC1LQ5JSQ8 128 aa18.24■□□□□ 0.51
SNX3-203ENST00000368979 ELOVL1Q9BW60 279 aa18.24■□□□□ 0.51
SNX3-203ENST00000368979 DAZ1Q9NQZ3 744 aaKnown RBP18.24■□□□□ 0.51
SNX3-203ENST00000368979 IGHV3-49A0A0A0MS15 119 aa18.23■□□□□ 0.51
SNX3-203ENST00000368979 IGHV3-66A0A0C4DH42 116 aa18.23■□□□□ 0.51
SNX3-203ENST00000368979 C16orf54Q6UWD8 224 aa18.23■□□□□ 0.51
SNX3-203ENST00000368979 REC114Q7Z4M0 266 aa18.23■□□□□ 0.51
SNX3-203ENST00000368979 C17orf77Q96MU5 243 aa18.23■□□□□ 0.51
SNX3-203ENST00000368979 PARLQ9H300 379 aa18.23■□□□□ 0.51
SNX3-203ENST00000368979 IGHV3OR16-13A0A075B7E8 117 aa18.23■□□□□ 0.51
SNX3-203ENST00000368979 IGHV3-74A0A0B4J1X5 117 aa18.23■□□□□ 0.51
SNX3-203ENST00000368979 HOXD3P31249 432 aaPredicted RBP18.23■□□□□ 0.51
SNX3-203ENST00000368979 PDE6HQ13956 83 aa18.23■□□□□ 0.51
SNX3-203ENST00000368979 SVBPQ8N300 66 aa18.23■□□□□ 0.51
SNX3-203ENST00000368979 KLHL30-AS1Q8NEE0 82 aa18.23■□□□□ 0.51
SNX3-203ENST00000368979 RPUSD4Q96CM3 377 aaKnown RBP18.23■□□□□ 0.51
SNX3-203ENST00000368979 Q9H3A6 140 aa18.23■□□□□ 0.51
SNX3-203ENST00000368979 UFC1Q9Y3C8 167 aa18.23■□□□□ 0.51
SNX3-203ENST00000368979 A0A087X0K7 114 aa18.22■□□□□ 0.51
SNX3-203ENST00000368979 HAX1O00165 279 aa18.22■□□□□ 0.51
SNX3-203ENST00000368979 LGALS9O00182 355 aa18.22■□□□□ 0.51
SNX3-203ENST00000368979 DEFB136Q30KP8 78 aa18.22■□□□□ 0.51
SNX3-203ENST00000368979 TM4SF20Q53R12 229 aa18.22■□□□□ 0.51
SNX3-203ENST00000368979 GLMPQ8WWB7 406 aa18.22■□□□□ 0.51
SNX3-203ENST00000368979 TCEAL7Q9BRU2 100 aa18.22■□□□□ 0.51
SNX3-203ENST00000368979 IGHV7-4-1A0A0J9YVY3 117 aa18.21■□□□□ 0.51
SNX3-203ENST00000368979 A8MWP6 167 aa18.21■□□□□ 0.51
SNX3-203ENST00000368979 LINC01619G3V211 115 aa18.21■□□□□ 0.51
SNX3-203ENST00000368979 SLC17A3O00476 420 aa18.21■□□□□ 0.51
SNX3-203ENST00000368979 HIST2H2BDQ6DRA6 164 aa18.21■□□□□ 0.51
SNX3-203ENST00000368979 SIGLEC15Q6ZMC9 328 aa18.21■□□□□ 0.51
SNX3-203ENST00000368979 OTORQ9NRC9 128 aa18.21■□□□□ 0.51
SNX3-203ENST00000368979 A0A1W2PS18 150 aa18.2■□□□□ 0.5
SNX3-203ENST00000368979 PGPA6NDG6 321 aa18.2■□□□□ 0.5
SNX3-203ENST00000368979 ZNF727A8MUV8 499 aa18.2■□□□□ 0.5
SNX3-203ENST00000368979 ATF4P18848 351 aaPredicted RBP18.2■□□□□ 0.5
SNX3-203ENST00000368979 GALR1P47211 349 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms