RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 C1orf194Q5T5A4 169 aa10.42□□□□□ -0.74
TPM3-211ENST00000368531 S100A7AQ86SG5 101 aa10.42□□□□□ -0.74
TPM3-211ENST00000368531 SPAG8Q99932 426 aaPredicted RBP10.42□□□□□ -0.74
TPM3-211ENST00000368531 SH3BGRL3Q9H299 93 aa10.42□□□□□ -0.74
TPM3-211ENST00000368531 MS4A6AQ9H2W1 248 aa10.42□□□□□ -0.74
TPM3-211ENST00000368531 CYTL1Q9NRR1 136 aa10.42□□□□□ -0.74
TPM3-211ENST00000368531 UBQLN2Q9UHD9 624 aa10.42□□□□□ -0.74
TPM3-211ENST00000368531 PKD1L1Q8TDX9 2849 aa10.41□□□□□ -0.74
TPM3-211ENST00000368531 BCL2L11O43521 198 aa10.41□□□□□ -0.74
TPM3-211ENST00000368531 JTBO76095 146 aa10.41□□□□□ -0.74
TPM3-211ENST00000368531 CD5P06127 495 aa10.41□□□□□ -0.74
TPM3-211ENST00000368531 SNRPCP09234 159 aaKnown RBP10.41□□□□□ -0.74
TPM3-211ENST00000368531 CD81P60033 236 aa10.41□□□□□ -0.74
TPM3-211ENST00000368531 FAM78BQ5VT40 261 aa10.41□□□□□ -0.74
TPM3-211ENST00000368531 GTSCR1Q86UQ5 136 aa10.41□□□□□ -0.74
TPM3-211ENST00000368531 GATAD1Q8WUU5 269 aa10.41□□□□□ -0.74
TPM3-211ENST00000368531 ZNF471Q9BX82 626 aaPredicted RBP10.41□□□□□ -0.74
TPM3-211ENST00000368531 TIMM9Q9Y5J7 89 aa10.41□□□□□ -0.74
TPM3-211ENST00000368531 OR4C46A6NHA9 309 aa10.4□□□□□ -0.74
TPM3-211ENST00000368531 EIF3GO75821 320 aaKnown RBP eCLIP10.4□□□□□ -0.74
TPM3-211ENST00000368531 GALR1P47211 349 aa10.4□□□□□ -0.74
TPM3-211ENST00000368531 NKX2-5P52952 324 aaPredicted RBP10.4□□□□□ -0.74
TPM3-211ENST00000368531 ACOT6Q3I5F7 207 aaPredicted RBP10.4□□□□□ -0.74
TPM3-211ENST00000368531 DEFB121Q5J5C9 76 aa10.4□□□□□ -0.74
TPM3-211ENST00000368531 SPATA31B1PQ5VZV4 182 aa10.4□□□□□ -0.74
TPM3-211ENST00000368531 MIR17HGQ75NE6 70 aa10.4□□□□□ -0.74
TPM3-211ENST00000368531 SMAD5-AS1Q9Y6J3 95 aa10.4□□□□□ -0.74
TPM3-211ENST00000368531 K7EIL1 84 aa10.39□□□□□ -0.75
TPM3-211ENST00000368531 RPL7P18124 248 aaKnown RBP10.39□□□□□ -0.75
TPM3-211ENST00000368531 ATF4P18848 351 aaPredicted RBP10.39□□□□□ -0.75
TPM3-211ENST00000368531 RAB2AP61019 212 aa10.39□□□□□ -0.75
TPM3-211ENST00000368531 FAM122CQ6P4D5 195 aa10.39□□□□□ -0.75
TPM3-211ENST00000368531 Q8N1Y9 231 aa10.39□□□□□ -0.75
TPM3-211ENST00000368531 FAM24BQ8N5W8 94 aa10.39□□□□□ -0.75
TPM3-211ENST00000368531 OR2G3Q8NGZ4 309 aa10.39□□□□□ -0.75
TPM3-211ENST00000368531 GNPNAT1Q96EK6 184 aaPredicted RBP10.39□□□□□ -0.75
TPM3-211ENST00000368531 PSMG3Q9BT73 122 aaPredicted RBP10.39□□□□□ -0.75
TPM3-211ENST00000368531 WFDC10AQ9H1F0 79 aa10.39□□□□□ -0.75
TPM3-211ENST00000368531 SEPSECSQ9HD40 501 aaKnown RBP10.39□□□□□ -0.75
TPM3-211ENST00000368531 H3BTX0 84 aa10.38□□□□□ -0.75
TPM3-211ENST00000368531 K7EQG2 157 aa10.38□□□□□ -0.75
TPM3-211ENST00000368531 OR10G4Q8NGN3 311 aa10.38□□□□□ -0.75
TPM3-211ENST00000368531 OR10G9Q8NGN4 311 aa10.38□□□□□ -0.75
TPM3-211ENST00000368531 OR10G7Q8NGN6 311 aa10.38□□□□□ -0.75
TPM3-211ENST00000368531 MRAPQ8TCY5 172 aa10.38□□□□□ -0.75
TPM3-211ENST00000368531 GPR82Q96P67 336 aa10.38□□□□□ -0.75
TPM3-211ENST00000368531 NRN1Q9NPD7 142 aa10.38□□□□□ -0.75
TPM3-211ENST00000368531 RNF24Q9Y225 148 aa10.38□□□□□ -0.75
TPM3-211ENST00000368531 A0A1W2PPV4 95 aa10.37□□□□□ -0.75
TPM3-211ENST00000368531 OR11H12B2RN74 326 aa10.37□□□□□ -0.75
TPM3-211ENST00000368531 HMGB3O15347 200 aaKnown RBP10.37□□□□□ -0.75
TPM3-211ENST00000368531 ZNF688P0C7X2 276 aa10.37□□□□□ -0.75
TPM3-211ENST00000368531 M6PRP20645 277 aa10.37□□□□□ -0.75
TPM3-211ENST00000368531 RHOBP62745 196 aa10.37□□□□□ -0.75
TPM3-211ENST00000368531 BPIFA4PQ86YQ2 179 aa10.37□□□□□ -0.75
TPM3-211ENST00000368531 C9orf62Q8N4C0 152 aa10.37□□□□□ -0.75
TPM3-211ENST00000368531 DEFB125Q8N687 156 aa10.37□□□□□ -0.75
TPM3-211ENST00000368531 DCANP1Q8TF63 244 aa10.37□□□□□ -0.75
TPM3-211ENST00000368531 C17orf77Q96MU5 243 aa10.37□□□□□ -0.75
TPM3-211ENST00000368531 FUT9Q9Y231 359 aa10.37□□□□□ -0.75
TPM3-211ENST00000368531 CMYA5Q8N3K9 4069 aa10.37□□□□□ -0.75
TPM3-211ENST00000368531 PYYP10082 97 aa10.36□□□□□ -0.75
TPM3-211ENST00000368531 DEFB131AP59861 70 aa10.36□□□□□ -0.75
TPM3-211ENST00000368531 SERF2P84101 59 aa10.36□□□□□ -0.75
TPM3-211ENST00000368531 ZNF124Q15973 351 aa10.36□□□□□ -0.75
TPM3-211ENST00000368531 IGFL4Q6B9Z1 124 aa10.36□□□□□ -0.75
TPM3-211ENST00000368531 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.36□□□□□ -0.75
TPM3-211ENST00000368531 APRG1Q8IVJ8 170 aa10.36□□□□□ -0.75
TPM3-211ENST00000368531 C16orf92Q96LL3 132 aa10.36□□□□□ -0.75
TPM3-211ENST00000368531 LINC00052Q96N35 136 aa10.36□□□□□ -0.75
TPM3-211ENST00000368531 SLC25A2Q9BXI2 301 aa10.36□□□□□ -0.75
TPM3-211ENST00000368531 MRPL32Q9BYC8 188 aaKnown RBP10.36□□□□□ -0.75
TPM3-211ENST00000368531 TRAV2A0A0B4J234 112 aa10.35□□□□□ -0.75
TPM3-211ENST00000368531 MRPS12O15235 138 aaKnown RBP10.35□□□□□ -0.75
TPM3-211ENST00000368531 SPP1P10451 314 aa10.35□□□□□ -0.75
TPM3-211ENST00000368531 TPT1P13693 172 aaKnown RBP10.35□□□□□ -0.75
TPM3-211ENST00000368531 EIF5AP63241 154 aaKnown RBP10.35□□□□□ -0.75
TPM3-211ENST00000368531 ODF3L2Q3SX64 289 aa10.35□□□□□ -0.75
TPM3-211ENST00000368531 TMEM41BQ5BJD5 291 aa10.35□□□□□ -0.75
TPM3-211ENST00000368531 PSMG4Q5JS54 123 aa10.35□□□□□ -0.75
TPM3-211ENST00000368531 AKR1C8PQ5T2L2 129 aa10.35□□□□□ -0.75
TPM3-211ENST00000368531 LRRC20Q8TCA0 184 aa10.35□□□□□ -0.75
TPM3-211ENST00000368531 FAM167A-AS1Q96KT0 104 aa10.35□□□□□ -0.75
TPM3-211ENST00000368531 TUBA4BQ9H853 241 aa10.35□□□□□ -0.75
TPM3-211ENST00000368531 MAP6D1Q9H9H5 199 aa10.35□□□□□ -0.75
TPM3-211ENST00000368531 RPRMQ9NS64 109 aa10.35□□□□□ -0.75
TPM3-211ENST00000368531 C19orf73Q9NVV2 129 aa10.35□□□□□ -0.75
TPM3-211ENST00000368531 MGAM2Q2M2H8 2515 aa10.35□□□□□ -0.75
TPM3-211ENST00000368531 H3BQ15 152 aa10.34□□□□□ -0.75
TPM3-211ENST00000368531 OR7C2O60412 319 aa10.34□□□□□ -0.75
TPM3-211ENST00000368531 MBP02144 154 aa10.34□□□□□ -0.75
TPM3-211ENST00000368531 OR10J4P0C629 311 aa10.34□□□□□ -0.75
TPM3-211ENST00000368531 ID1P41134 155 aa10.34□□□□□ -0.75
TPM3-211ENST00000368531 CDC34P49427 236 aaPredicted RBP10.34□□□□□ -0.75
TPM3-211ENST00000368531 CMC4P56277 68 aaPredicted RBP10.34□□□□□ -0.75
TPM3-211ENST00000368531 BAP18Q8IXM2 172 aa10.34□□□□□ -0.75
TPM3-211ENST00000368531 RPP25LQ8N5L8 163 aaKnown RBP10.34□□□□□ -0.75
TPM3-211ENST00000368531 BLNKQ8WV28 456 aa10.34□□□□□ -0.75
TPM3-211ENST00000368531 OR51M1Q9H341 326 aa10.34□□□□□ -0.75
TPM3-211ENST00000368531 SRD5A3Q9H8P0 318 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 122.6 ms