RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 FOXA3P55318 350 aaPredicted RBP14.3□□□□□ -0.12
UBQLN4-201ENST00000368309 CFHR4Q92496 578 aa14.3□□□□□ -0.12
UBQLN4-201ENST00000368309 MIEN1Q9BRT3 115 aa14.3□□□□□ -0.12
UBQLN4-201ENST00000368309 OTORQ9NRC9 128 aa14.3□□□□□ -0.12
UBQLN4-201ENST00000368309 MSRB2Q9Y3D2 182 aa14.3□□□□□ -0.12
UBQLN4-201ENST00000368309 C19orf71A6NCJ1 209 aa14.29□□□□□ -0.12
UBQLN4-201ENST00000368309 HSBP1O75506 76 aa14.29□□□□□ -0.12
UBQLN4-201ENST00000368309 IL4P05112 153 aa14.29□□□□□ -0.12
UBQLN4-201ENST00000368309 RNASEKQ6P5S7 137 aaKnown RBP14.29□□□□□ -0.12
UBQLN4-201ENST00000368309 OR11H6Q8NGC7 330 aa14.29□□□□□ -0.12
UBQLN4-201ENST00000368309 A0A1B0GXF2 115 aa14.29□□□□□ -0.12
UBQLN4-201ENST00000368309 RAB4AP20338 218 aa14.29□□□□□ -0.12
UBQLN4-201ENST00000368309 LCN12Q6JVE5 192 aa14.29□□□□□ -0.12
UBQLN4-201ENST00000368309 ATOH7Q8N100 152 aa14.29□□□□□ -0.12
UBQLN4-201ENST00000368309 BORCS7Q96B45 105 aa14.29□□□□□ -0.12
UBQLN4-201ENST00000368309 COL8A1P27658 744 aa14.28□□□□□ -0.12
UBQLN4-201ENST00000368309 FCGR2BP31994 310 aaPredicted RBP14.28□□□□□ -0.12
UBQLN4-201ENST00000368309 NCBP2LA6PVI3 153 aaKnown RBP14.28□□□□□ -0.12
UBQLN4-201ENST00000368309 M0QZ24 198 aa14.28□□□□□ -0.12
UBQLN4-201ENST00000368309 IGLV2-11P01706 119 aa14.28□□□□□ -0.12
UBQLN4-201ENST00000368309 NUTF2P61970 127 aaKnown RBP14.28□□□□□ -0.12
UBQLN4-201ENST00000368309 HBBP68871 147 aa14.28□□□□□ -0.12
UBQLN4-201ENST00000368309 Q86TA4 180 aa14.28□□□□□ -0.12
UBQLN4-201ENST00000368309 ZNF491Q8N8L2 437 aa14.28□□□□□ -0.12
UBQLN4-201ENST00000368309 SMIM12Q96EX1 92 aa14.28□□□□□ -0.12
UBQLN4-201ENST00000368309 TMEM14CQ9P0S9 112 aa14.28□□□□□ -0.12
UBQLN4-201ENST00000368309 BPIFA4PQ86YQ2 179 aa14.27□□□□□ -0.13
UBQLN4-201ENST00000368309 DYNAPQ8N1N2 210 aa14.27□□□□□ -0.13
UBQLN4-201ENST00000368309 SHANK2-AS3Q9BTD1 123 aa14.27□□□□□ -0.13
UBQLN4-201ENST00000368309 SPTAN1Q13813 2472 aaKnown RBP14.27□□□□□ -0.13
UBQLN4-201ENST00000368309 IGHV3-23P01764 117 aa14.27□□□□□ -0.13
UBQLN4-201ENST00000368309 CEACAM3P40198 252 aa14.27□□□□□ -0.13
UBQLN4-201ENST00000368309 KLRB1Q12918 225 aa14.27□□□□□ -0.13
UBQLN4-201ENST00000368309 ATP5L2Q7Z4Y8 100 aa14.27□□□□□ -0.13
UBQLN4-201ENST00000368309 RNF125Q96EQ8 232 aa14.27□□□□□ -0.13
UBQLN4-201ENST00000368309 TRBV19A0A075B6N1 114 aa14.26□□□□□ -0.13
UBQLN4-201ENST00000368309 C5orf64Q2M2E5 130 aa14.26□□□□□ -0.13
UBQLN4-201ENST00000368309 M0R2Z0 102 aa14.26□□□□□ -0.13
UBQLN4-201ENST00000368309 TCAPO15273 167 aa14.26□□□□□ -0.13
UBQLN4-201ENST00000368309 NDUFS7O75251 213 aa14.26□□□□□ -0.13
UBQLN4-201ENST00000368309 OR2J3O76001 311 aa14.26□□□□□ -0.13
UBQLN4-201ENST00000368309 PRTN3P24158 256 aa14.26□□□□□ -0.13
UBQLN4-201ENST00000368309 SSTP61278 116 aa14.26□□□□□ -0.13
UBQLN4-201ENST00000368309 OR4F17Q8NGA8 305 aa14.26□□□□□ -0.13
UBQLN4-201ENST00000368309 M0R3E3 92 aa14.26□□□□□ -0.13
UBQLN4-201ENST00000368309 GNG7O60262 68 aa14.26□□□□□ -0.13
UBQLN4-201ENST00000368309 PMCHL1Q16048 86 aa14.26□□□□□ -0.13
UBQLN4-201ENST00000368309 BATFQ16520 125 aa14.26□□□□□ -0.13
UBQLN4-201ENST00000368309 SPATA45Q537H7 98 aa14.26□□□□□ -0.13
UBQLN4-201ENST00000368309 ZNF492Q9P255 531 aa14.26□□□□□ -0.13
UBQLN4-201ENST00000368309 SH2D7A6NKC9 451 aaPredicted RBP14.25□□□□□ -0.13
UBQLN4-201ENST00000368309 SRSF8Q9BRL6 282 aaKnown RBP14.25□□□□□ -0.13
UBQLN4-201ENST00000368309 ZNF785A8K8V0 405 aa14.25□□□□□ -0.13
UBQLN4-201ENST00000368309 MAJINQ3KP22 176 aa14.25□□□□□ -0.13
UBQLN4-201ENST00000368309 NPBQ8NG41 125 aa14.25□□□□□ -0.13
UBQLN4-201ENST00000368309 NDPQ00604 133 aa14.24□□□□□ -0.13
UBQLN4-201ENST00000368309 KLF5Q13887 457 aaPredicted RBP14.24□□□□□ -0.13
UBQLN4-201ENST00000368309 RBPMS2Q6ZRY4 209 aaKnown RBP14.24□□□□□ -0.13
UBQLN4-201ENST00000368309 OR4B1Q8NGF8 309 aa14.24□□□□□ -0.13
UBQLN4-201ENST00000368309 FANCD2OSQ96PS1 177 aa14.24□□□□□ -0.13
UBQLN4-201ENST00000368309 H3BRN7 92 aa14.24□□□□□ -0.13
UBQLN4-201ENST00000368309 NDUFA3O95167 84 aa14.24□□□□□ -0.13
UBQLN4-201ENST00000368309 C11orf71Q6IPW1 123 aa14.24□□□□□ -0.13
UBQLN4-201ENST00000368309 EBLN2Q6P2I7 272 aa14.24□□□□□ -0.13
UBQLN4-201ENST00000368309 ZC2HC1AQ96GY0 325 aa14.24□□□□□ -0.13
UBQLN4-201ENST00000368309 URB1-AS1Q96HZ7 61 aa14.24□□□□□ -0.13
UBQLN4-201ENST00000368309 HIVEP3Q5T1R4 2406 aa14.24□□□□□ -0.13
UBQLN4-201ENST00000368309 ODF3BA8MYP8 253 aa14.23□□□□□ -0.13
UBQLN4-201ENST00000368309 HLA-DRB1P01911 266 aa14.23□□□□□ -0.13
UBQLN4-201ENST00000368309 IGLC2P0DOY2 106 aa14.23□□□□□ -0.13
UBQLN4-201ENST00000368309 ZFP36P26651 326 aaKnown RBP14.23□□□□□ -0.13
UBQLN4-201ENST00000368309 CT83Q5H943 113 aa14.23□□□□□ -0.13
UBQLN4-201ENST00000368309 SIGLEC15Q6ZMC9 328 aa14.23□□□□□ -0.13
UBQLN4-201ENST00000368309 VMO1Q7Z5L0 202 aa14.23□□□□□ -0.13
UBQLN4-201ENST00000368309 A0A1W2PPR1 153 aa14.23□□□□□ -0.13
UBQLN4-201ENST00000368309 FAM181BA6NEQ2 426 aa14.23□□□□□ -0.13
UBQLN4-201ENST00000368309 M0R1W7 72 aa14.23□□□□□ -0.13
UBQLN4-201ENST00000368309 G0S2P27469 103 aa14.23□□□□□ -0.13
UBQLN4-201ENST00000368309 Q56UQ5 140 aa14.23□□□□□ -0.13
UBQLN4-201ENST00000368309 CTRLP40313 264 aa14.22□□□□□ -0.13
UBQLN4-201ENST00000368309 CLEC5AQ9NY25 188 aa14.22□□□□□ -0.13
UBQLN4-201ENST00000368309 ARPC1AQ92747 370 aa14.22□□□□□ -0.13
UBQLN4-201ENST00000368309 ZNF562Q6V9R5 426 aa14.22□□□□□ -0.13
UBQLN4-201ENST00000368309 ZNF414Q96IQ9 312 aa14.22□□□□□ -0.13
UBQLN4-201ENST00000368309 IGHV3OR16-8A0A075B7F1 116 aa14.21□□□□□ -0.13
UBQLN4-201ENST00000368309 NPIPB6E9PJ23 425 aa14.21□□□□□ -0.13
UBQLN4-201ENST00000368309 CHEK1O14757 476 aa14.21□□□□□ -0.13
UBQLN4-201ENST00000368309 NEU4Q8WWR8 484 aaPredicted RBP14.21□□□□□ -0.13
UBQLN4-201ENST00000368309 PSG8Q9UQ74 426 aa14.21□□□□□ -0.13
UBQLN4-201ENST00000368309 IGHV3-35A0A0C4DH35 117 aa14.21□□□□□ -0.13
UBQLN4-201ENST00000368309 ZNF138P52744 262 aa14.21□□□□□ -0.13
UBQLN4-201ENST00000368309 TPPP3Q9BW30 176 aa14.21□□□□□ -0.13
UBQLN4-201ENST00000368309 IGLV11-55A0A075B6I3 123 aa14.21□□□□□ -0.14
UBQLN4-201ENST00000368309 MFAP4P55083 255 aa14.21□□□□□ -0.14
UBQLN4-201ENST00000368309 GFRA4Q9GZZ7 299 aa14.21□□□□□ -0.14
UBQLN4-201ENST00000368309 WI2-2373I1.2A0A1W2PRP0 233 aa14.2□□□□□ -0.14
UBQLN4-201ENST00000368309 MRPS12O15235 138 aaKnown RBP14.2□□□□□ -0.14
UBQLN4-201ENST00000368309 HOXB4P17483 251 aaPredicted RBP14.2□□□□□ -0.14
UBQLN4-201ENST00000368309 OR2T8A6NH00 312 aa14.2□□□□□ -0.14
UBQLN4-201ENST00000368309 F8W735 103 aaPredicted RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms