RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 TNXAQ16473 311 aa9.22□□□□□ -0.93
USF1-201ENST00000368019 LRRC10Q5BKY1 277 aa9.22□□□□□ -0.93
USF1-201ENST00000368019 MOGAT3Q86VF5 341 aa9.22□□□□□ -0.93
USF1-201ENST00000368019 PDPNQ86YL7 162 aa9.22□□□□□ -0.93
USF1-201ENST00000368019 GATD1Q8NB37 220 aa9.22□□□□□ -0.93
USF1-201ENST00000368019 ZNRF1Q8ND25 227 aa9.22□□□□□ -0.93
USF1-201ENST00000368019 OR5AN1Q8NGI8 311 aa9.22□□□□□ -0.93
USF1-201ENST00000368019 OR10X1Q8NGY0 326 aa9.22□□□□□ -0.93
USF1-201ENST00000368019 OR9G1Q8NH87 305 aa9.22□□□□□ -0.93
USF1-201ENST00000368019 FXYD5Q96DB9 178 aa9.22□□□□□ -0.93
USF1-201ENST00000368019 GAFA1Q96PS6 74 aa9.22□□□□□ -0.93
USF1-201ENST00000368019 TMEM70Q9BUB7 260 aa9.22□□□□□ -0.93
USF1-201ENST00000368019 HINT2Q9BX68 163 aa9.22□□□□□ -0.93
USF1-201ENST00000368019 PRSS22Q9GZN4 317 aa9.22□□□□□ -0.93
USF1-201ENST00000368019 SVEP1Q4LDE5 3571 aa9.22□□□□□ -0.93
USF1-201ENST00000368019 IGHV3OR15-7A0A075B7D8 119 aa9.21□□□□□ -0.94
USF1-201ENST00000368019 TRAV30A0A087WSZ9 112 aa9.21□□□□□ -0.94
USF1-201ENST00000368019 A8MWL6 223 aa9.21□□□□□ -0.94
USF1-201ENST00000368019 VWC2LB2RUY7 222 aa9.21□□□□□ -0.94
USF1-201ENST00000368019 M0R1B8 84 aa9.21□□□□□ -0.94
USF1-201ENST00000368019 TCF21O43680 179 aa9.21□□□□□ -0.94
USF1-201ENST00000368019 FSTL3O95633 263 aa9.21□□□□□ -0.94
USF1-201ENST00000368019 CRYGCP07315 174 aa9.21□□□□□ -0.94
USF1-201ENST00000368019 NTF3P20783 257 aa9.21□□□□□ -0.94
USF1-201ENST00000368019 EFNA4P52798 201 aa9.21□□□□□ -0.94
USF1-201ENST00000368019 PTTG1IPP53801 180 aa9.21□□□□□ -0.94
USF1-201ENST00000368019 TCL1AP56279 114 aa9.21□□□□□ -0.94
USF1-201ENST00000368019 PLP1P60201 277 aa9.21□□□□□ -0.94
USF1-201ENST00000368019 HBBP68871 147 aa9.21□□□□□ -0.94
USF1-201ENST00000368019 KRTAP24-1Q3LI83 254 aa9.21□□□□□ -0.94
USF1-201ENST00000368019 ITLN1Q8WWA0 313 aa9.21□□□□□ -0.94
USF1-201ENST00000368019 FAM168AQ92567 244 aa9.21□□□□□ -0.94
USF1-201ENST00000368019 FMC1Q96HJ9 113 aa9.21□□□□□ -0.94
USF1-201ENST00000368019 GPR82Q96P67 336 aa9.21□□□□□ -0.94
USF1-201ENST00000368019 TRGV9Q99603 122 aa9.21□□□□□ -0.94
USF1-201ENST00000368019 MLST8Q9BVC4 326 aa9.21□□□□□ -0.94
USF1-201ENST00000368019 MS4A6AQ9H2W1 248 aa9.21□□□□□ -0.94
USF1-201ENST00000368019 ZNF355PQ9NSJ1 428 aa9.21□□□□□ -0.94
USF1-201ENST00000368019 ANK2Q01484 3957 aa9.2□□□□□ -0.94
USF1-201ENST00000368019 IGHV2-70DA0A0C4DH43 119 aa9.2□□□□□ -0.94
USF1-201ENST00000368019 SPINK4O60575 86 aa9.2□□□□□ -0.94
USF1-201ENST00000368019 LY6HO94772 140 aa9.2□□□□□ -0.94
USF1-201ENST00000368019 TNFSF4P23510 183 aa9.2□□□□□ -0.94
USF1-201ENST00000368019 APOBEC3AP31941 199 aaPredicted RBP9.2□□□□□ -0.94
USF1-201ENST00000368019 TFPI2P48307 235 aa9.2□□□□□ -0.94
USF1-201ENST00000368019 ZNF137PP52743 207 aa9.2□□□□□ -0.94
USF1-201ENST00000368019 RHOGP84095 191 aa9.2□□□□□ -0.94
USF1-201ENST00000368019 HOXA4Q00056 320 aaPredicted RBP9.2□□□□□ -0.94
USF1-201ENST00000368019 MSMPQ1L6U9 139 aa9.2□□□□□ -0.94
USF1-201ENST00000368019 ANKRD39Q53RE8 183 aa9.2□□□□□ -0.94
USF1-201ENST00000368019 EBLN2Q6P2I7 272 aa9.2□□□□□ -0.94
USF1-201ENST00000368019 PET117Q6UWS5 81 aa9.2□□□□□ -0.94
USF1-201ENST00000368019 ZCCHC24Q8N2G6 241 aaKnown RBP9.2□□□□□ -0.94
USF1-201ENST00000368019 FAM19A2Q8N3H0 131 aa9.2□□□□□ -0.94
USF1-201ENST00000368019 C5orf17Q8NAS9 161 aa9.2□□□□□ -0.94
USF1-201ENST00000368019 OR4F17Q8NGA8 305 aa9.2□□□□□ -0.94
USF1-201ENST00000368019 TMEM186Q96B77 213 aa9.2□□□□□ -0.94
USF1-201ENST00000368019 NDFIP1Q9BT67 221 aa9.2□□□□□ -0.94
USF1-201ENST00000368019 TMEM191AQ9H0A3 160 aa9.2□□□□□ -0.94
USF1-201ENST00000368019 RPP21Q9H633 154 aaKnown RBP9.2□□□□□ -0.94
USF1-201ENST00000368019 FZR1Q9UM11 496 aa9.2□□□□□ -0.94
USF1-201ENST00000368019 EPDR1Q9UM22 224 aa9.2□□□□□ -0.94
USF1-201ENST00000368019 IGKV1D-37A0A075B6S9 117 aa9.19□□□□□ -0.94
USF1-201ENST00000368019 C19orf71A6NCJ1 209 aa9.19□□□□□ -0.94
USF1-201ENST00000368019 SRRM4A7MD48 611 aaKnown RBP9.19□□□□□ -0.94
USF1-201ENST00000368019 HIGD1CA8MV81 97 aa9.19□□□□□ -0.94
USF1-201ENST00000368019 NPIPB6E9PJ23 425 aa9.19□□□□□ -0.94
USF1-201ENST00000368019 CORTO00230 105 aa9.19□□□□□ -0.94
USF1-201ENST00000368019 IGLL1P15814 213 aa9.19□□□□□ -0.94
USF1-201ENST00000368019 CDKN1BP46527 198 aa9.19□□□□□ -0.94
USF1-201ENST00000368019 SLC35B1P78383 322 aa9.19□□□□□ -0.94
USF1-201ENST00000368019 FAM120AOSQ5T036 256 aa9.19□□□□□ -0.94
USF1-201ENST00000368019 GDF5OSQ5U4N7 250 aa9.19□□□□□ -0.94
USF1-201ENST00000368019 OR4C13Q8NGP0 309 aa9.19□□□□□ -0.94
USF1-201ENST00000368019 DPF1Q92782 380 aa9.19□□□□□ -0.94
USF1-201ENST00000368019 HARBI1Q96MB7 349 aa9.19□□□□□ -0.94
USF1-201ENST00000368019 PMCHL2Q9BQD1 86 aa9.19□□□□□ -0.94
USF1-201ENST00000368019 A0A1B0GW15 77 aa9.18□□□□□ -0.94
USF1-201ENST00000368019 CCL25O15444 150 aa9.18□□□□□ -0.94
USF1-201ENST00000368019 DYSFO75923 2080 aa9.18□□□□□ -0.94
USF1-201ENST00000368019 LTAP01374 205 aa9.18□□□□□ -0.94
USF1-201ENST00000368019 LIPFP07098 398 aa9.18□□□□□ -0.94
USF1-201ENST00000368019 MYOD1P15172 320 aa9.18□□□□□ -0.94
USF1-201ENST00000368019 GATA2P23769 480 aaPredicted RBP9.18□□□□□ -0.94
USF1-201ENST00000368019 FOXA3P55318 350 aaPredicted RBP9.18□□□□□ -0.94
USF1-201ENST00000368019 TNFAIP6P98066 277 aaPredicted RBP9.18□□□□□ -0.94
USF1-201ENST00000368019 SAPCD1Q5SSQ6 148 aa9.18□□□□□ -0.94
USF1-201ENST00000368019 RNASEKQ6P5S7 137 aaKnown RBP9.18□□□□□ -0.94
USF1-201ENST00000368019 C16orf54Q6UWD8 224 aa9.18□□□□□ -0.94
USF1-201ENST00000368019 PATE2Q6UY27 113 aa9.18□□□□□ -0.94
USF1-201ENST00000368019 C12orf54Q6X4T0 127 aa9.18□□□□□ -0.94
USF1-201ENST00000368019 MOB3BQ86TA1 216 aa9.18□□□□□ -0.94
USF1-201ENST00000368019 ARL6IP6Q8N6S5 226 aa9.18□□□□□ -0.94
USF1-201ENST00000368019 FLYWCH2Q96CP2 140 aaKnown RBP9.18□□□□□ -0.94
USF1-201ENST00000368019 WNT10AQ9GZT5 417 aa9.18□□□□□ -0.94
USF1-201ENST00000368019 TENM1Q9UKZ4 2725 aa9.17□□□□□ -0.94
USF1-201ENST00000368019 SYS1-DBNDD2H3BUS1 97 aa9.17□□□□□ -0.94
USF1-201ENST00000368019 NDUFS8O00217 210 aa9.17□□□□□ -0.94
USF1-201ENST00000368019 MC5RP33032 325 aa9.17□□□□□ -0.94
USF1-201ENST00000368019 VMA21Q3ZAQ7 101 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms