RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 UCP3P55916 312 aa9.77□□□□□ -0.85
VAMP4-202ENST00000367740 RHOBP62745 196 aa9.77□□□□□ -0.85
VAMP4-202ENST00000367740 HIST1H1AQ02539 215 aaPredicted RBP9.77□□□□□ -0.85
VAMP4-202ENST00000367740 GAMTQ14353 236 aa9.77□□□□□ -0.85
VAMP4-202ENST00000367740 LYSMD2Q8IV50 215 aa9.77□□□□□ -0.85
VAMP4-202ENST00000367740 ARRDC1Q8N5I2 433 aa9.77□□□□□ -0.85
VAMP4-202ENST00000367740 OR52E5Q8NH55 327 aa9.77□□□□□ -0.85
VAMP4-202ENST00000367740 ZFP92A6NM28 416 aa9.76□□□□□ -0.85
VAMP4-202ENST00000367740 ATG12O94817 140 aa9.76□□□□□ -0.85
VAMP4-202ENST00000367740 HLA-DMAP28067 261 aa9.76□□□□□ -0.85
VAMP4-202ENST00000367740 CDKN1BP46527 198 aa9.76□□□□□ -0.85
VAMP4-202ENST00000367740 KIR3DS1Q14943 382 aa9.76□□□□□ -0.85
VAMP4-202ENST00000367740 SPARTQ8N0X7 666 aa9.76□□□□□ -0.85
VAMP4-202ENST00000367740 ZNF738Q8NE65 137 aa9.76□□□□□ -0.85
VAMP4-202ENST00000367740 SLC25A22Q9H936 323 aa9.76□□□□□ -0.85
VAMP4-202ENST00000367740 EVI2AP22794 236 aa9.75□□□□□ -0.85
VAMP4-202ENST00000367740 RND3P61587 244 aa9.75□□□□□ -0.85
VAMP4-202ENST00000367740 TSPAN5P62079 268 aa9.75□□□□□ -0.85
VAMP4-202ENST00000367740 KLF9Q13886 244 aaPredicted RBP9.75□□□□□ -0.85
VAMP4-202ENST00000367740 NMSQ5H8A3 153 aa9.75□□□□□ -0.85
VAMP4-202ENST00000367740 OR8A1Q8NGG7 326 aa9.75□□□□□ -0.85
VAMP4-202ENST00000367740 RS1O15537 224 aa9.74□□□□□ -0.85
VAMP4-202ENST00000367740 OR5AC1P0C628 307 aa9.74□□□□□ -0.85
VAMP4-202ENST00000367740 CLEC2LP0C7M8 214 aa9.74□□□□□ -0.85
VAMP4-202ENST00000367740 PRB4P10163 310 aaPredicted RBP9.74□□□□□ -0.85
VAMP4-202ENST00000367740 PI3P19957 117 aa9.74□□□□□ -0.85
VAMP4-202ENST00000367740 DAZ2Q13117 558 aaKnown RBP9.74□□□□□ -0.85
VAMP4-202ENST00000367740 OR2F1Q13607 317 aa9.74□□□□□ -0.85
VAMP4-202ENST00000367740 TRIM16LQ309B1 348 aa9.74□□□□□ -0.85
VAMP4-202ENST00000367740 CCDC28AQ8IWP9 274 aa9.74□□□□□ -0.85
VAMP4-202ENST00000367740 PPP1R14DQ9NXH3 145 aa9.74□□□□□ -0.85
VAMP4-202ENST00000367740 TRGV2A0A075B6R0 118 aa9.73□□□□□ -0.85
VAMP4-202ENST00000367740 C3orf85A0A1B0GTC6 90 aa9.73□□□□□ -0.85
VAMP4-202ENST00000367740 CEBPZOSA8MTT3 80 aa9.73□□□□□ -0.85
VAMP4-202ENST00000367740 SNRPGP15A8MWD9 76 aa9.73□□□□□ -0.85
VAMP4-202ENST00000367740 PAX4O43316 350 aa9.73□□□□□ -0.85
VAMP4-202ENST00000367740 ZNF324O75467 553 aaPredicted RBP9.73□□□□□ -0.85
VAMP4-202ENST00000367740 CRYGDP07320 174 aa9.73□□□□□ -0.85
VAMP4-202ENST00000367740 HNRNPA3P51991 378 aaKnown RBP9.73□□□□□ -0.85
VAMP4-202ENST00000367740 MXD1Q05195 221 aa9.73□□□□□ -0.85
VAMP4-202ENST00000367740 RNASE11Q8TAA1 199 aaKnown RBP9.73□□□□□ -0.85
VAMP4-202ENST00000367740 IL22RA2Q969J5 263 aa9.73□□□□□ -0.85
VAMP4-202ENST00000367740 C20orf144Q9BQM9 153 aa9.73□□□□□ -0.85
VAMP4-202ENST00000367740 PGAM2P15259 253 aa9.72□□□□□ -0.85
VAMP4-202ENST00000367740 SDC2P34741 201 aa9.72□□□□□ -0.85
VAMP4-202ENST00000367740 PIGPP57054 158 aa9.72□□□□□ -0.85
VAMP4-202ENST00000367740 SP6Q3SY56 376 aa9.72□□□□□ -0.85
VAMP4-202ENST00000367740 LRTM2Q8N967 370 aa9.72□□□□□ -0.85
VAMP4-202ENST00000367740 OR1B1Q8NGR6 318 aa9.72□□□□□ -0.85
VAMP4-202ENST00000367740 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.72□□□□□ -0.85
VAMP4-202ENST00000367740 FGL1Q08830 312 aa9.71□□□□□ -0.86
VAMP4-202ENST00000367740 PSG3Q16557 428 aa9.71□□□□□ -0.86
VAMP4-202ENST00000367740 GFI1BQ5VTD9 330 aa9.71□□□□□ -0.86
VAMP4-202ENST00000367740 NOXA1Q86UR1 476 aa9.71□□□□□ -0.86
VAMP4-202ENST00000367740 C10orf126Q8N4M7 172 aa9.71□□□□□ -0.86
VAMP4-202ENST00000367740 OR4D5Q8NGN0 318 aa9.71□□□□□ -0.86
VAMP4-202ENST00000367740 ZNF486Q96H40 463 aaPredicted RBP9.71□□□□□ -0.86
VAMP4-202ENST00000367740 PARD6GQ9BYG4 376 aaPredicted RBP9.71□□□□□ -0.86
VAMP4-202ENST00000367740 CACNG5Q9UF02 275 aa9.71□□□□□ -0.86
VAMP4-202ENST00000367740 FABP1P07148 127 aa9.7□□□□□ -0.86
VAMP4-202ENST00000367740 RCVRNP35243 200 aa9.7□□□□□ -0.86
VAMP4-202ENST00000367740 WFDC2Q14508 124 aa9.7□□□□□ -0.86
VAMP4-202ENST00000367740 NEGR1Q7Z3B1 354 aa9.7□□□□□ -0.86
VAMP4-202ENST00000367740 FAM219AQ8IW50 185 aa9.7□□□□□ -0.86
VAMP4-202ENST00000367740 GPR82Q96P67 336 aa9.7□□□□□ -0.86
VAMP4-202ENST00000367740 FUT9Q9Y231 359 aa9.7□□□□□ -0.86
VAMP4-202ENST00000367740 IGKV1OR2-108A0A075B7D4 117 aa9.69□□□□□ -0.86
VAMP4-202ENST00000367740 CXCL3P19876 107 aa9.69□□□□□ -0.86
VAMP4-202ENST00000367740 MRPL23Q16540 153 aaKnown RBP9.69□□□□□ -0.86
VAMP4-202ENST00000367740 LINC01620Q4KN68 170 aa9.69□□□□□ -0.86
VAMP4-202ENST00000367740 SLC35E1Q96K37 410 aa9.69□□□□□ -0.86
VAMP4-202ENST00000367740 TRGV9Q99603 122 aa9.69□□□□□ -0.86
VAMP4-202ENST00000367740 CHAC1Q9BUX1 264 aa9.69□□□□□ -0.86
VAMP4-202ENST00000367740 SLC45A2Q9UMX9 530 aa9.69□□□□□ -0.86
VAMP4-202ENST00000367740 RCL1Q9Y2P8 373 aaKnown RBP9.69□□□□□ -0.86
VAMP4-202ENST00000367740 TRGV1A0A0A0MS02 117 aa9.68□□□□□ -0.86
VAMP4-202ENST00000367740 A6NJY4 79 aa9.68□□□□□ -0.86
VAMP4-202ENST00000367740 PRSS3P35030 304 aa9.68□□□□□ -0.86
VAMP4-202ENST00000367740 CRYBA4P53673 196 aa9.68□□□□□ -0.86
VAMP4-202ENST00000367740 LHFPL5Q8TAF8 219 aa9.68□□□□□ -0.86
VAMP4-202ENST00000367740 CIRBP-AS1Q8TBR5 109 aa9.68□□□□□ -0.86
VAMP4-202ENST00000367740 DAZAP1Q96EP5 407 aaKnown RBP9.68□□□□□ -0.86
VAMP4-202ENST00000367740 PRO0255Q9UI72 69 aa9.68□□□□□ -0.86
VAMP4-202ENST00000367740 TRAV5A0A0B4J249 113 aa9.67□□□□□ -0.86
VAMP4-202ENST00000367740 GABARAPH6UMI1 98 aa9.67□□□□□ -0.86
VAMP4-202ENST00000367740 PRAF2O60831 178 aa9.67□□□□□ -0.86
VAMP4-202ENST00000367740 GABARAPO95166 117 aa9.67□□□□□ -0.86
VAMP4-202ENST00000367740 IGHV3-53P01767 116 aa9.67□□□□□ -0.86
VAMP4-202ENST00000367740 C11orf72Q8NBR9 251 aa9.67□□□□□ -0.86
VAMP4-202ENST00000367740 GPX8Q8TED1 209 aa9.67□□□□□ -0.86
VAMP4-202ENST00000367740 S100A16Q96FQ6 103 aaKnown RBP9.67□□□□□ -0.86
VAMP4-202ENST00000367740 GSN-AS1Q9NRJ2 163 aa9.67□□□□□ -0.86
VAMP4-202ENST00000367740 CDS2O95674 445 aa9.66□□□□□ -0.86
VAMP4-202ENST00000367740 GPX4P36969 197 aaPredicted RBP9.66□□□□□ -0.86
VAMP4-202ENST00000367740 MEF2DQ14814 521 aa9.66□□□□□ -0.86
VAMP4-202ENST00000367740 LHFPL1Q86WI0 220 aa9.66□□□□□ -0.86
VAMP4-202ENST00000367740 THAP8Q8NA92 274 aa9.66□□□□□ -0.86
VAMP4-202ENST00000367740 RPUSD4Q96CM3 377 aaKnown RBP9.66□□□□□ -0.86
VAMP4-202ENST00000367740 ST6GAL2Q96JF0 529 aa9.66□□□□□ -0.86
VAMP4-202ENST00000367740 C8orf49Q96NF6 230 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms