RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 COTL1Q14019 142 aa10.85□□□□□ -0.67
PRKN-205ENST00000366897 DEFB109BQ30KR1 87 aa10.85□□□□□ -0.67
PRKN-205ENST00000366897 THAP8Q8NA92 274 aa10.85□□□□□ -0.67
PRKN-205ENST00000366897 MAP1LC3CQ9BXW4 147 aa10.85□□□□□ -0.67
PRKN-205ENST00000366897 KLF12Q9Y4X4 402 aa10.85□□□□□ -0.67
PRKN-205ENST00000366897 TRAV17A0A0B4J275 112 aa10.84□□□□□ -0.67
PRKN-205ENST00000366897 LTAP01374 205 aa10.84□□□□□ -0.67
PRKN-205ENST00000366897 GP9P14770 177 aa10.84□□□□□ -0.67
PRKN-205ENST00000366897 GATA4P43694 442 aa10.84□□□□□ -0.67
PRKN-205ENST00000366897 SUB1P53999 127 aaKnown RBP eCLIP10.84□□□□□ -0.67
PRKN-205ENST00000366897 ATP5IP56385 69 aaPredicted RBP10.84□□□□□ -0.67
PRKN-205ENST00000366897 C5orf17Q8NAS9 161 aa10.84□□□□□ -0.67
PRKN-205ENST00000366897 CCL17Q92583 94 aa10.84□□□□□ -0.67
PRKN-205ENST00000366897 C17orf77Q96MU5 243 aa10.84□□□□□ -0.67
PRKN-205ENST00000366897 SCRT2Q9NQ03 307 aa10.84□□□□□ -0.67
PRKN-205ENST00000366897 PPIAL4DF5H284 164 aa10.84□□□□□ -0.67
PRKN-205ENST00000366897 ARF6P62330 175 aa10.84□□□□□ -0.67
PRKN-205ENST00000366897 TIMM23BQ5SRD1 257 aa10.84□□□□□ -0.67
PRKN-205ENST00000366897 DEFB125Q8N687 156 aa10.84□□□□□ -0.67
PRKN-205ENST00000366897 SRSF12Q8WXF0 261 aaKnown RBP10.84□□□□□ -0.67
PRKN-205ENST00000366897 ZGRF1Q86YA3 2104 aa10.84□□□□□ -0.67
PRKN-205ENST00000366897 LOC389332A0A1B0GUA5 103 aa10.83□□□□□ -0.68
PRKN-205ENST00000366897 APOHP02749 345 aaPredicted RBP10.83□□□□□ -0.68
PRKN-205ENST00000366897 CHCHD1Q96BP2 118 aaKnown RBP10.83□□□□□ -0.68
PRKN-205ENST00000366897 NCOR1P1Q9H4R4 102 aa10.83□□□□□ -0.68
PRKN-205ENST00000366897 LINC00574Q9H8X3 128 aa10.83□□□□□ -0.68
PRKN-205ENST00000366897 MED13LQ71F56 2210 aa10.83□□□□□ -0.68
PRKN-205ENST00000366897 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.83□□□□□ -0.68
PRKN-205ENST00000366897 LOXL1Q08397 574 aaPredicted RBP10.83□□□□□ -0.68
PRKN-205ENST00000366897 MRGPRG-AS1Q2M3A8 158 aa10.83□□□□□ -0.68
PRKN-205ENST00000366897 OCIAD2Q56VL3 154 aa10.83□□□□□ -0.68
PRKN-205ENST00000366897 TMSB15BA0A087X1C1 80 aa10.83□□□□□ -0.68
PRKN-205ENST00000366897 ZNF785A8K8V0 405 aa10.83□□□□□ -0.68
PRKN-205ENST00000366897 LIPFP07098 398 aa10.83□□□□□ -0.68
PRKN-205ENST00000366897 Q86TA4 180 aa10.83□□□□□ -0.68
PRKN-205ENST00000366897 IGFBPL1Q8WX77 278 aa10.83□□□□□ -0.68
PRKN-205ENST00000366897 FAM215AQ9Y5M1 114 aa10.83□□□□□ -0.68
PRKN-205ENST00000366897 ABCA4P78363 2273 aa10.82□□□□□ -0.68
PRKN-205ENST00000366897 RHOGP84095 191 aa10.82□□□□□ -0.68
PRKN-205ENST00000366897 OR8A1Q8NGG7 326 aa10.82□□□□□ -0.68
PRKN-205ENST00000366897 NEU4Q8WWR8 484 aaPredicted RBP10.82□□□□□ -0.68
PRKN-205ENST00000366897 FMC1Q96HJ9 113 aa10.82□□□□□ -0.68
PRKN-205ENST00000366897 PRORYQ9H606 182 aa10.82□□□□□ -0.68
PRKN-205ENST00000366897 S4R3C0 116 aa10.82□□□□□ -0.68
PRKN-205ENST00000366897 OR5AL1P0C617 328 aa10.81□□□□□ -0.68
PRKN-205ENST00000366897 VSTM2AQ8TAG5 236 aa10.81□□□□□ -0.68
PRKN-205ENST00000366897 HILPDAQ9Y5L2 63 aa10.81□□□□□ -0.68
PRKN-205ENST00000366897 SVEP1Q4LDE5 3571 aa10.81□□□□□ -0.68
PRKN-205ENST00000366897 SAP30O75446 220 aa10.81□□□□□ -0.68
PRKN-205ENST00000366897 HLA-DRB1P01911 266 aa10.81□□□□□ -0.68
PRKN-205ENST00000366897 TNFRSF1AP19438 455 aa10.81□□□□□ -0.68
PRKN-205ENST00000366897 CD40P25942 277 aa10.81□□□□□ -0.68
PRKN-205ENST00000366897 GPR183P32249 361 aa10.81□□□□□ -0.68
PRKN-205ENST00000366897 UCNP55089 124 aa10.81□□□□□ -0.68
PRKN-205ENST00000366897 C12orf54Q6X4T0 127 aa10.81□□□□□ -0.68
PRKN-205ENST00000366897 C2orf91Q6ZV80 131 aa10.81□□□□□ -0.68
PRKN-205ENST00000366897 ZADH2Q8N4Q0 377 aa10.81□□□□□ -0.68
PRKN-205ENST00000366897 LRBAP50851 2863 aa10.81□□□□□ -0.68
PRKN-205ENST00000366897 IGLV2-11P01706 119 aa10.8□□□□□ -0.68
PRKN-205ENST00000366897 RBP4P02753 201 aa10.8□□□□□ -0.68
PRKN-205ENST00000366897 VMA21Q3ZAQ7 101 aa10.8□□□□□ -0.68
PRKN-205ENST00000366897 WFDC8Q8IUA0 241 aa10.8□□□□□ -0.68
PRKN-205ENST00000366897 STXBP6Q8NFX7 210 aa10.8□□□□□ -0.68
PRKN-205ENST00000366897 AP5S1Q9NUS5 200 aa10.8□□□□□ -0.68
PRKN-205ENST00000366897 MBD3L4A6NDZ8 208 aaPredicted RBP10.8□□□□□ -0.68
PRKN-205ENST00000366897 MBD3L3A6NE82 208 aaPredicted RBP10.8□□□□□ -0.68
PRKN-205ENST00000366897 MBD3L5A6NJ08 208 aaPredicted RBP10.8□□□□□ -0.68
PRKN-205ENST00000366897 K7ENP7 123 aa10.8□□□□□ -0.68
PRKN-205ENST00000366897 M0R3E3 92 aa10.8□□□□□ -0.68
PRKN-205ENST00000366897 WFDC3Q8IUB2 231 aa10.8□□□□□ -0.68
PRKN-205ENST00000366897 PRSS3P2Q8NHM4 247 aa10.8□□□□□ -0.68
PRKN-205ENST00000366897 MBD3L2Q8NHZ7 208 aaPredicted RBP10.8□□□□□ -0.68
PRKN-205ENST00000366897 NDFIP1Q9BT67 221 aa10.8□□□□□ -0.68
PRKN-205ENST00000366897 ATRXP46100 2492 aa10.8□□□□□ -0.68
PRKN-205ENST00000366897 NBASA2RRP1 2371 aa10.8□□□□□ -0.68
PRKN-205ENST00000366897 SERTM2A0A1B0GWG4 89 aa10.79□□□□□ -0.68
PRKN-205ENST00000366897 GAGE12BA1L429 117 aa10.79□□□□□ -0.68
PRKN-205ENST00000366897 C7orf71A4D174 169 aa10.79□□□□□ -0.68
PRKN-205ENST00000366897 RPL27AP46776 148 aaKnown RBP10.79□□□□□ -0.68
PRKN-205ENST00000366897 FAM162BQ5T6X4 162 aa10.79□□□□□ -0.68
PRKN-205ENST00000366897 PET117Q6UWS5 81 aa10.79□□□□□ -0.68
PRKN-205ENST00000366897 FAM169BQ8N8A8 192 aa10.79□□□□□ -0.68
PRKN-205ENST00000366897 ZNF492Q9P255 531 aa10.79□□□□□ -0.68
PRKN-205ENST00000366897 CTSZQ9UBR2 303 aa10.79□□□□□ -0.68
PRKN-205ENST00000366897 HIGD1AQ9Y241 93 aa10.79□□□□□ -0.68
PRKN-205ENST00000366897 BSNQ9UPA5 3926 aa10.79□□□□□ -0.68
PRKN-205ENST00000366897 OVOL3O00110 214 aa10.79□□□□□ -0.68
PRKN-205ENST00000366897 IFI27P40305 119 aaPredicted RBP10.79□□□□□ -0.68
PRKN-205ENST00000366897 TEX36Q5VZQ5 186 aa10.79□□□□□ -0.68
PRKN-205ENST00000366897 C1RLQ9NZP8 487 aa10.79□□□□□ -0.68
PRKN-205ENST00000366897 SH3BGRL2Q9UJC5 107 aa10.79□□□□□ -0.68
PRKN-205ENST00000366897 HSPB8Q9UJY1 196 aa10.79□□□□□ -0.68
PRKN-205ENST00000366897 A0A1B0GUT8 65 aa10.79□□□□□ -0.68
PRKN-205ENST00000366897 CRYGCP07315 174 aa10.79□□□□□ -0.68
PRKN-205ENST00000366897 CT83Q5H943 113 aa10.79□□□□□ -0.68
PRKN-205ENST00000366897 TRGV9Q99603 122 aa10.79□□□□□ -0.68
PRKN-205ENST00000366897 ZNF747Q9BV97 191 aa10.79□□□□□ -0.68
PRKN-205ENST00000366897 HIST1H1AQ02539 215 aaPredicted RBP10.78□□□□□ -0.68
PRKN-205ENST00000366897 LINC01545Q5VT33 79 aa10.78□□□□□ -0.68
PRKN-205ENST00000366897 FA2HQ7L5A8 372 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms