RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 C19orf84I3L1E1 186 aa11.76□□□□□ -0.53
PRKN-204ENST00000366896 SRSF1Q07955 248 aaKnown RBP eCLIP11.76□□□□□ -0.53
PRKN-204ENST00000366896 ADIPOQQ15848 244 aa11.76□□□□□ -0.53
PRKN-204ENST00000366896 AMMECR1LQ6DCA0 310 aa11.76□□□□□ -0.53
PRKN-204ENST00000366896 H1FXQ92522 213 aaKnown RBP11.76□□□□□ -0.53
PRKN-204ENST00000366896 TPSG1Q9NRR2 321 aa11.76□□□□□ -0.53
PRKN-204ENST00000366896 KLF12Q9Y4X4 402 aa11.76□□□□□ -0.53
PRKN-204ENST00000366896 PPIAL4EA0A075B759 164 aa11.75□□□□□ -0.53
PRKN-204ENST00000366896 PPIAL4DF5H284 164 aa11.75□□□□□ -0.53
PRKN-204ENST00000366896 TMEM178BH3BS89 294 aa11.75□□□□□ -0.53
PRKN-204ENST00000366896 PPIAL4FP0DN26 164 aa11.75□□□□□ -0.53
PRKN-204ENST00000366896 LGALS7P47929 136 aa11.75□□□□□ -0.53
PRKN-204ENST00000366896 OR10X1Q8NGY0 326 aa11.75□□□□□ -0.53
PRKN-204ENST00000366896 CD5LO43866 347 aa11.75□□□□□ -0.53
PRKN-204ENST00000366896 PLAUP00749 431 aa11.75□□□□□ -0.53
PRKN-204ENST00000366896 FOXA3P55318 350 aaPredicted RBP11.75□□□□□ -0.53
PRKN-204ENST00000366896 VMA21Q3ZAQ7 101 aa11.75□□□□□ -0.53
PRKN-204ENST00000366896 RUSC1-AS1Q66K80 236 aa11.75□□□□□ -0.53
PRKN-204ENST00000366896 LYPD2Q6UXB3 125 aa11.75□□□□□ -0.53
PRKN-204ENST00000366896 KAAG1Q9UBP8 84 aa11.75□□□□□ -0.53
PRKN-204ENST00000366896 ANKHD1Q8IWZ3 2542 aaKnown RBP11.74□□□□□ -0.53
PRKN-204ENST00000366896 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.74□□□□□ -0.53
PRKN-204ENST00000366896 HSBP1L1C9JCN9 74 aa11.74□□□□□ -0.53
PRKN-204ENST00000366896 PRR31Q5SQ13 230 aa11.74□□□□□ -0.53
PRKN-204ENST00000366896 TCF24Q7RTU0 167 aa11.74□□□□□ -0.53
PRKN-204ENST00000366896 LHFPL4Q7Z7J7 247 aa11.74□□□□□ -0.53
PRKN-204ENST00000366896 RITA1Q96K30 269 aa11.74□□□□□ -0.53
PRKN-204ENST00000366896 NDUFB3O43676 98 aa11.74□□□□□ -0.53
PRKN-204ENST00000366896 DLX6P56179 175 aa11.74□□□□□ -0.53
PRKN-204ENST00000366896 PSG9Q00887 426 aa11.74□□□□□ -0.53
PRKN-204ENST00000366896 TMEM190Q8WZ59 177 aa11.74□□□□□ -0.53
PRKN-204ENST00000366896 PERPQ96FX8 193 aa11.74□□□□□ -0.53
PRKN-204ENST00000366896 TRGV9Q99603 122 aa11.74□□□□□ -0.53
PRKN-204ENST00000366896 SOX21Q9Y651 276 aaPredicted RBP11.74□□□□□ -0.53
PRKN-204ENST00000366896 UBR5O95071 2799 aaPredicted RBP11.73□□□□□ -0.53
PRKN-204ENST00000366896 OR5AL1P0C617 328 aa11.73□□□□□ -0.53
PRKN-204ENST00000366896 PLA2G2AP14555 144 aa11.73□□□□□ -0.53
PRKN-204ENST00000366896 GNG5P63218 68 aa11.73□□□□□ -0.53
PRKN-204ENST00000366896 PET117Q6UWS5 81 aa11.73□□□□□ -0.53
PRKN-204ENST00000366896 MS4A6AQ9H2W1 248 aa11.73□□□□□ -0.53
PRKN-204ENST00000366896 RPP21Q9H633 154 aaKnown RBP11.73□□□□□ -0.53
PRKN-204ENST00000366896 MYO18BQ8IUG5 2567 aa11.73□□□□□ -0.53
PRKN-204ENST00000366896 ROS1P08922 2347 aa11.73□□□□□ -0.53
PRKN-204ENST00000366896 CD24P25063 80 aa11.73□□□□□ -0.53
PRKN-204ENST00000366896 HIST1H1AQ02539 215 aaPredicted RBP11.73□□□□□ -0.53
PRKN-204ENST00000366896 CT83Q5H943 113 aa11.73□□□□□ -0.53
PRKN-204ENST00000366896 TEX45Q8NA69 505 aa11.73□□□□□ -0.53
PRKN-204ENST00000366896 CCL17Q92583 94 aa11.73□□□□□ -0.53
PRKN-204ENST00000366896 MLST8Q9BVC4 326 aa11.73□□□□□ -0.53
PRKN-204ENST00000366896 PRSS22Q9GZN4 317 aa11.73□□□□□ -0.53
PRKN-204ENST00000366896 EPDR1Q9UM22 224 aa11.73□□□□□ -0.53
PRKN-204ENST00000366896 DOPEY1Q5JWR5 2465 aa11.72□□□□□ -0.53
PRKN-204ENST00000366896 FLNCQ14315 2725 aa11.72□□□□□ -0.53
PRKN-204ENST00000366896 SLC25A17O43808 307 aa11.72□□□□□ -0.53
PRKN-204ENST00000366896 LIPFP07098 398 aa11.72□□□□□ -0.53
PRKN-204ENST00000366896 LOXP28300 417 aaPredicted RBP11.72□□□□□ -0.53
PRKN-204ENST00000366896 PLP1P60201 277 aa11.72□□□□□ -0.53
PRKN-204ENST00000366896 MRGPRG-AS1Q2M3A8 158 aa11.72□□□□□ -0.53
PRKN-204ENST00000366896 LINC00305Q7Z4B0 112 aa11.72□□□□□ -0.53
PRKN-204ENST00000366896 GTSF1Q8WW33 167 aa11.72□□□□□ -0.53
PRKN-204ENST00000366896 TNFRSF14Q92956 283 aa11.72□□□□□ -0.53
PRKN-204ENST00000366896 CSTL1Q9H114 145 aa11.72□□□□□ -0.53
PRKN-204ENST00000366896 CTSZQ9UBR2 303 aa11.72□□□□□ -0.53
PRKN-204ENST00000366896 USP9XQ93008 2570 aaPredicted RBP11.72□□□□□ -0.53
PRKN-204ENST00000366896 A0A1W2PPI3 338 aa11.71□□□□□ -0.53
PRKN-204ENST00000366896 GAGE12BA1L429 117 aa11.71□□□□□ -0.53
PRKN-204ENST00000366896 A8MWL6 223 aa11.71□□□□□ -0.53
PRKN-204ENST00000366896 SHISA9B4DS77 424 aa11.71□□□□□ -0.53
PRKN-204ENST00000366896 MOSP00540 346 aa11.71□□□□□ -0.53
PRKN-204ENST00000366896 CD3EP07766 207 aa11.71□□□□□ -0.53
PRKN-204ENST00000366896 TMEM155Q4W5P6 130 aa11.71□□□□□ -0.53
PRKN-204ENST00000366896 TMEM116Q8NCL8 245 aa11.71□□□□□ -0.53
PRKN-204ENST00000366896 GPR82Q96P67 336 aa11.71□□□□□ -0.53
PRKN-204ENST00000366896 MAP1LC3CQ9BXW4 147 aa11.71□□□□□ -0.53
PRKN-204ENST00000366896 IGHV3-72A0A0B4J1Y9 119 aa11.71□□□□□ -0.53
PRKN-204ENST00000366896 TRAV8-6A0A0B4J262 113 aa11.71□□□□□ -0.53
PRKN-204ENST00000366896 K7ERU9 68 aa11.71□□□□□ -0.53
PRKN-204ENST00000366896 LINC00322Q6ZN03 302 aaPredicted RBP11.71□□□□□ -0.53
PRKN-204ENST00000366896 SGK494Q96LW2 274 aa11.71□□□□□ -0.53
PRKN-204ENST00000366896 VSTM5A8MXK1 200 aa11.7□□□□□ -0.54
PRKN-204ENST00000366896 C22orf46C9J442 243 aa11.7□□□□□ -0.54
PRKN-204ENST00000366896 NDFIP1Q9BT67 221 aa11.7□□□□□ -0.54
PRKN-204ENST00000366896 ZNF492Q9P255 531 aa11.7□□□□□ -0.54
PRKN-204ENST00000366896 PEF1Q9UBV8 284 aaKnown RBP11.7□□□□□ -0.54
PRKN-204ENST00000366896 PLXNB1O43157 2135 aa11.7□□□□□ -0.54
PRKN-204ENST00000366896 A0A087X0K7 114 aa11.7□□□□□ -0.54
PRKN-204ENST00000366896 C19orf71A6NCJ1 209 aa11.7□□□□□ -0.54
PRKN-204ENST00000366896 LOC102724200A0A096LPH7 203 aaPredicted RBP11.69□□□□□ -0.54
PRKN-204ENST00000366896 SLC25A5P05141 298 aaKnown RBP11.69□□□□□ -0.54
PRKN-204ENST00000366896 APELAP0DMC3 54 aa11.69□□□□□ -0.54
PRKN-204ENST00000366896 GPR183P32249 361 aa11.69□□□□□ -0.54
PRKN-204ENST00000366896 DLX1P56177 255 aa11.69□□□□□ -0.54
PRKN-204ENST00000366896 HCP5Q6MZN7 132 aa11.69□□□□□ -0.54
PRKN-204ENST00000366896 PGLYRP4Q96LB8 373 aa11.69□□□□□ -0.54
PRKN-204ENST00000366896 GFRA4Q9GZZ7 299 aa11.69□□□□□ -0.54
PRKN-204ENST00000366896 J3QKU1 62 aa11.69□□□□□ -0.54
PRKN-204ENST00000366896 CRYGBP07316 175 aa11.69□□□□□ -0.54
PRKN-204ENST00000366896 IGLC1P0CG04 106 aa11.69□□□□□ -0.54
PRKN-204ENST00000366896 ORM2P19652 201 aa11.69□□□□□ -0.54
PRKN-204ENST00000366896 PRB3Q04118 309 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 287.4 ms