RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 CHD8Q9HCK8 2581 aa8.41□□□□□ -1.06
SMC3-201ENST00000361804 COL6A6A6NMZ7 2263 aa8.41□□□□□ -1.06
SMC3-201ENST00000361804 IGHV2-26A0A0B4J1V2 119 aa8.4□□□□□ -1.06
SMC3-201ENST00000361804 ARMS2P0C7Q2 107 aa8.4□□□□□ -1.06
SMC3-201ENST00000361804 SUB1P53999 127 aaKnown RBP eCLIP8.4□□□□□ -1.067e-7■■■■■ 39
SMC3-201ENST00000361804 VMA21Q3ZAQ7 101 aa8.4□□□□□ -1.06
SMC3-201ENST00000361804 LRRC10Q5BKY1 277 aa8.4□□□□□ -1.06
SMC3-201ENST00000361804 TMUB1Q9BVT8 246 aa8.4□□□□□ -1.06
SMC3-201ENST00000361804 OR2J3O76001 311 aa8.4□□□□□ -1.06
SMC3-201ENST00000361804 LINC00614P0C842 121 aa8.4□□□□□ -1.06
SMC3-201ENST00000361804 KLF5Q13887 457 aaPredicted RBP8.4□□□□□ -1.06
SMC3-201ENST00000361804 LDLRAD2Q5SZI1 272 aa8.4□□□□□ -1.06
SMC3-201ENST00000361804 JKAMPQ9P055 326 aa8.4□□□□□ -1.06
SMC3-201ENST00000361804 C16orf97H3BN30 126 aa8.4□□□□□ -1.07
SMC3-201ENST00000361804 NCR2O95944 276 aa8.4□□□□□ -1.07
SMC3-201ENST00000361804 DLX6P56179 175 aa8.4□□□□□ -1.07
SMC3-201ENST00000361804 COX19Q49B96 90 aa8.4□□□□□ -1.07
SMC3-201ENST00000361804 KLHDC1Q8N7A1 406 aa8.4□□□□□ -1.07
SMC3-201ENST00000361804 DAZAP1Q96EP5 407 aaKnown RBP8.4□□□□□ -1.07
SMC3-201ENST00000361804 C19orf71A6NCJ1 209 aa8.39□□□□□ -1.07
SMC3-201ENST00000361804 CBY3A6NI87 242 aa8.39□□□□□ -1.07
SMC3-201ENST00000361804 TNFRSF13BO14836 293 aaPredicted RBP8.39□□□□□ -1.07
SMC3-201ENST00000361804 LEPROTL1O95214 131 aa8.39□□□□□ -1.07
SMC3-201ENST00000361804 LTAP01374 205 aa8.39□□□□□ -1.07
SMC3-201ENST00000361804 PCP4P48539 62 aa8.39□□□□□ -1.07
SMC3-201ENST00000361804 LOXL1Q08397 574 aaPredicted RBP8.39□□□□□ -1.07
SMC3-201ENST00000361804 IGFL4Q6B9Z1 124 aa8.39□□□□□ -1.07
SMC3-201ENST00000361804 VSTM2AQ8TAG5 236 aa8.39□□□□□ -1.07
SMC3-201ENST00000361804 DYNLRB1Q9NP97 96 aa8.39□□□□□ -1.07
SMC3-201ENST00000361804 A0A087X0K7 114 aa8.39□□□□□ -1.07
SMC3-201ENST00000361804 SYS1-DBNDD2H3BUS1 97 aa8.39□□□□□ -1.07
SMC3-201ENST00000361804 CHEK1O14757 476 aa8.39□□□□□ -1.07
SMC3-201ENST00000361804 IGLV2-11P01706 119 aa8.39□□□□□ -1.07
SMC3-201ENST00000361804 IGHV3-23P01764 117 aa8.39□□□□□ -1.07
SMC3-201ENST00000361804 SRSF12Q8WXF0 261 aaKnown RBP8.39□□□□□ -1.07
SMC3-201ENST00000361804 TMEM186Q96B77 213 aa8.39□□□□□ -1.07
SMC3-201ENST00000361804 PRSS22Q9GZN4 317 aa8.39□□□□□ -1.07
SMC3-201ENST00000361804 LOC105371242A0A075B767 164 aa8.39□□□□□ -1.07
SMC3-201ENST00000361804 LOC389332A0A1B0GUA5 103 aa8.39□□□□□ -1.07
SMC3-201ENST00000361804 NUDT3O95989 172 aa8.39□□□□□ -1.07
SMC3-201ENST00000361804 MEF2CQ06413 473 aaPredicted RBP8.39□□□□□ -1.07
SMC3-201ENST00000361804 Q86TA4 180 aa8.39□□□□□ -1.07
SMC3-201ENST00000361804 SIGLEC9Q9Y336 463 aa8.39□□□□□ -1.07
SMC3-201ENST00000361804 COX11Q9Y6N1 276 aa8.39□□□□□ -1.07
SMC3-201ENST00000361804 SPTAN1Q13813 2472 aaKnown RBP8.39□□□□□ -1.07
SMC3-201ENST00000361804 IGHV3-35A0A0C4DH35 117 aa8.39□□□□□ -1.07
SMC3-201ENST00000361804 PLGLAQ15195 96 aa8.39□□□□□ -1.07
SMC3-201ENST00000361804 C5orf17Q8NAS9 161 aa8.39□□□□□ -1.07
SMC3-201ENST00000361804 SLC25A39Q9BZJ4 359 aaPredicted RBP8.39□□□□□ -1.07
SMC3-201ENST00000361804 KLF12Q9Y4X4 402 aa8.39□□□□□ -1.07
SMC3-201ENST00000361804 LOC102724200A0A096LPH7 203 aaPredicted RBP8.38□□□□□ -1.07
SMC3-201ENST00000361804 A8MWL6 223 aa8.38□□□□□ -1.07
SMC3-201ENST00000361804 TEX22C9J3V5 150 aa8.38□□□□□ -1.07
SMC3-201ENST00000361804 TOMM40O96008 361 aa8.38□□□□□ -1.07
SMC3-201ENST00000361804 SFTPCP11686 197 aa8.38□□□□□ -1.07
SMC3-201ENST00000361804 TMEM155Q4W5P6 130 aa8.38□□□□□ -1.07
SMC3-201ENST00000361804 MRPL52Q86TS9 123 aaKnown RBP8.38□□□□□ -1.07
SMC3-201ENST00000361804 TMEM116Q8NCL8 245 aa8.38□□□□□ -1.07
SMC3-201ENST00000361804 RNASE6Q93091 150 aaKnown RBP8.38□□□□□ -1.07
SMC3-201ENST00000361804 C8orf49Q96NF6 230 aa8.38□□□□□ -1.07
SMC3-201ENST00000361804 TMEM133Q9H2Q1 129 aa8.38□□□□□ -1.07
SMC3-201ENST00000361804 OR2T8A6NH00 312 aa8.38□□□□□ -1.07
SMC3-201ENST00000361804 E7EQL1 145 aa8.38□□□□□ -1.07
SMC3-201ENST00000361804 OVOL3O00110 214 aa8.38□□□□□ -1.07
SMC3-201ENST00000361804 CRYGCP07315 174 aa8.38□□□□□ -1.07
SMC3-201ENST00000361804 FAM57AQ8TBR7 257 aa8.38□□□□□ -1.07
SMC3-201ENST00000361804 INSIG2Q9Y5U4 225 aa8.38□□□□□ -1.07
SMC3-201ENST00000361804 WFDC3Q8IUB2 231 aa8.38□□□□□ -1.07
SMC3-201ENST00000361804 HIGD1AQ9Y241 93 aa8.38□□□□□ -1.07
SMC3-201ENST00000361804 HILPDAQ9Y5L2 63 aa8.38□□□□□ -1.07
SMC3-201ENST00000361804 ZANQ9Y493 2812 aa8.38□□□□□ -1.07
SMC3-201ENST00000361804 IGSF10Q6WRI0 2623 aa8.37□□□□□ -1.07
SMC3-201ENST00000361804 IGLC1P0CG04 106 aa8.37□□□□□ -1.07
SMC3-201ENST00000361804 RNF151Q2KHN1 245 aa8.37□□□□□ -1.07
SMC3-201ENST00000361804 RBPMS2Q6ZRY4 209 aaKnown RBP8.37□□□□□ -1.07
SMC3-201ENST00000361804 MUC15Q8N387 334 aa8.37□□□□□ -1.07
SMC3-201ENST00000361804 NUP37Q8NFH4 326 aa8.37□□□□□ -1.07
SMC3-201ENST00000361804 IGHV1-3A0A0C4DH29 117 aa8.37□□□□□ -1.07
SMC3-201ENST00000361804 IGKV1-17P01599 117 aa8.37□□□□□ -1.07
SMC3-201ENST00000361804 HTR1DP28221 377 aa8.37□□□□□ -1.07
SMC3-201ENST00000361804 CRIP1P50238 77 aa8.37□□□□□ -1.07
SMC3-201ENST00000361804 PPP1R27Q86WC6 154 aa8.37□□□□□ -1.07
SMC3-201ENST00000361804 C8orf46Q8TAG6 207 aa8.37□□□□□ -1.07
SMC3-201ENST00000361804 NAA38Q9BRA0 125 aaKnown RBP8.37□□□□□ -1.07
SMC3-201ENST00000361804 GRNP28799 593 aaKnown RBP8.37□□□□□ -1.07
SMC3-201ENST00000361804 ATP5IP56385 69 aaPredicted RBP8.37□□□□□ -1.07
SMC3-201ENST00000361804 VAMP3Q15836 100 aa8.37□□□□□ -1.07
SMC3-201ENST00000361804 ABHD17AQ96GS6 310 aa8.37□□□□□ -1.07
SMC3-201ENST00000361804 TRGV9Q99603 122 aa8.37□□□□□ -1.07
SMC3-201ENST00000361804 APOHP02749 345 aaPredicted RBP8.36□□□□□ -1.07
SMC3-201ENST00000361804 RASL11AQ6T310 242 aa8.36□□□□□ -1.07
SMC3-201ENST00000361804 MRPS16Q9Y3D3 137 aaKnown RBP8.36□□□□□ -1.07
SMC3-201ENST00000361804 TMEM213A2RRL7 107 aa8.36□□□□□ -1.07
SMC3-201ENST00000361804 CNIH1O95406 144 aa8.36□□□□□ -1.07
SMC3-201ENST00000361804 KLRD1Q13241 179 aa8.36□□□□□ -1.07
SMC3-201ENST00000361804 FMC1Q96HJ9 113 aa8.36□□□□□ -1.07
SMC3-201ENST00000361804 ZNF738Q8NE65 137 aa8.36□□□□□ -1.07
SMC3-201ENST00000361804 F11RQ9Y624 299 aaKnown RBP8.36□□□□□ -1.07
SMC3-201ENST00000361804 SERTM2A0A1B0GWG4 89 aa8.35□□□□□ -1.07
SMC3-201ENST00000361804 INS-IGF2F8WCM5 200 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms