RNA–Protein interactions for RNA: ENST00000361168.9

CLK2-202, Transcript of CDC like kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLK2, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-202ENST00000361168 GP9P14770 177 aa13.4□□□□□ -0.26
CLK2-202ENST00000361168 SIGLEC15Q6ZMC9 328 aa13.4□□□□□ -0.26
CLK2-202ENST00000361168 MIR17HGQ75NE6 70 aa13.4□□□□□ -0.26
CLK2-202ENST00000361168 NARS2Q96I59 477 aaKnown RBP13.4□□□□□ -0.26
CLK2-202ENST00000361168 WFDC10AQ9H1F0 79 aa13.4□□□□□ -0.26
CLK2-202ENST00000361168 LCN12Q6JVE5 192 aa13.39□□□□□ -0.27
CLK2-202ENST00000361168 STXBP6Q8NFX7 210 aa13.39□□□□□ -0.27
CLK2-202ENST00000361168 H3BTX0 84 aa13.39□□□□□ -0.27
CLK2-202ENST00000361168 PXDC1Q5TGL8 231 aa13.39□□□□□ -0.27
CLK2-202ENST00000361168 GPR61Q9BZJ8 451 aa13.39□□□□□ -0.27
CLK2-202ENST00000361168 TIMM9Q9Y5J7 89 aa13.39□□□□□ -0.27
CLK2-202ENST00000361168 MRPS12O15235 138 aaKnown RBP13.38□□□□□ -0.27
CLK2-202ENST00000361168 HMGB3O15347 200 aaKnown RBP13.38□□□□□ -0.27
CLK2-202ENST00000361168 PRB4P10163 310 aaPredicted RBP13.38□□□□□ -0.27
CLK2-202ENST00000361168 RPP25LQ8N5L8 163 aaKnown RBP13.38□□□□□ -0.27
CLK2-202ENST00000361168 OR1L4Q8NGR5 311 aa13.38□□□□□ -0.27
CLK2-202ENST00000361168 OR2G3Q8NGZ4 309 aa13.38□□□□□ -0.27
CLK2-202ENST00000361168 DCANP1Q8TF63 244 aa13.38□□□□□ -0.27
CLK2-202ENST00000361168 GATAD1Q8WUU5 269 aa13.38□□□□□ -0.27
CLK2-202ENST00000361168 GRAMD2BQ96HH9 432 aa13.38□□□□□ -0.27
CLK2-202ENST00000361168 PFDN5Q99471 154 aa13.38□□□□□ -0.27
CLK2-202ENST00000361168 TMEM231Q9H6L2 316 aa13.38□□□□□ -0.27
CLK2-202ENST00000361168 NBEAL2Q6ZNJ1 2754 aa13.38□□□□□ -0.27
CLK2-202ENST00000361168 ZNF124Q15973 351 aa13.37□□□□□ -0.27
CLK2-202ENST00000361168 C1orf194Q5T5A4 169 aa13.37□□□□□ -0.27
CLK2-202ENST00000361168 PSMG3Q9BT73 122 aaPredicted RBP13.37□□□□□ -0.27
CLK2-202ENST00000361168 AURKAIP1Q9NWT8 199 aaPredicted RBP13.37□□□□□ -0.27
CLK2-202ENST00000361168 SPP1P10451 314 aa13.37□□□□□ -0.27
CLK2-202ENST00000361168 SSX7Q7RTT5 188 aa13.37□□□□□ -0.27
CLK2-202ENST00000361168 OR2K2Q8NGT1 345 aa13.37□□□□□ -0.27
CLK2-202ENST00000361168 FAM167A-AS1Q96KT0 104 aa13.37□□□□□ -0.27
CLK2-202ENST00000361168 SLC25A2Q9BXI2 301 aa13.37□□□□□ -0.27
CLK2-202ENST00000361168 KCNIP2Q9NS61 270 aa13.37□□□□□ -0.27
CLK2-202ENST00000361168 RPRMQ9NS64 109 aa13.37□□□□□ -0.27
CLK2-202ENST00000361168 UBQLN2Q9UHD9 624 aa13.37□□□□□ -0.27
CLK2-202ENST00000361168 TRAV25A0A0B4J276 109 aa13.36□□□□□ -0.27
CLK2-202ENST00000361168 H3BQ15 152 aa13.36□□□□□ -0.27
CLK2-202ENST00000361168 PYYP10082 97 aa13.36□□□□□ -0.27
CLK2-202ENST00000361168 M6PRP20645 277 aa13.36□□□□□ -0.27
CLK2-202ENST00000361168 BMI1P35226 326 aa13.36□□□□□ -0.27
CLK2-202ENST00000361168 FHITP49789 147 aa13.36□□□□□ -0.27
CLK2-202ENST00000361168 IGFL4Q6B9Z1 124 aa13.36□□□□□ -0.27
CLK2-202ENST00000361168 Q8N1Y9 231 aa13.36□□□□□ -0.27
CLK2-202ENST00000361168 OR10G4Q8NGN3 311 aa13.36□□□□□ -0.27
CLK2-202ENST00000361168 OR10G9Q8NGN4 311 aa13.36□□□□□ -0.27
CLK2-202ENST00000361168 OR10G7Q8NGN6 311 aa13.36□□□□□ -0.27
CLK2-202ENST00000361168 SPAG8Q99932 426 aaPredicted RBP13.36□□□□□ -0.27
CLK2-202ENST00000361168 GNPNAT1Q96EK6 184 aaPredicted RBP13.35□□□□□ -0.27
CLK2-202ENST00000361168 FUT9Q9Y231 359 aa13.35□□□□□ -0.27
CLK2-202ENST00000361168 HELTA6NFD8 242 aa13.35□□□□□ -0.27
CLK2-202ENST00000361168 DEFB1P60022 68 aa13.35□□□□□ -0.27
CLK2-202ENST00000361168 CD81P60033 236 aa13.35□□□□□ -0.27
CLK2-202ENST00000361168 ODF3L2Q3SX64 289 aa13.35□□□□□ -0.27
CLK2-202ENST00000361168 FAM122CQ6P4D5 195 aa13.35□□□□□ -0.27
CLK2-202ENST00000361168 BAP18Q8IXM2 172 aa13.35□□□□□ -0.27
CLK2-202ENST00000361168 TMED6Q8WW62 240 aa13.35□□□□□ -0.27
CLK2-202ENST00000361168 ZNF503Q96F45 646 aa13.35□□□□□ -0.27
CLK2-202ENST00000361168 NRN1Q9NPD7 142 aa13.35□□□□□ -0.27
CLK2-202ENST00000361168 C19orf73Q9NVV2 129 aa13.35□□□□□ -0.27
CLK2-202ENST00000361168 PFDN2Q9UHV9 154 aa13.35□□□□□ -0.27
CLK2-202ENST00000361168 K7EIL1 84 aa13.34□□□□□ -0.27
CLK2-202ENST00000361168 DNASE2O00115 360 aaPredicted RBP13.34□□□□□ -0.27
CLK2-202ENST00000361168 SERF2P84101 59 aa13.34□□□□□ -0.27
CLK2-202ENST00000361168 DEFA6Q01524 100 aa13.34□□□□□ -0.27
CLK2-202ENST00000361168 ZNF726P1Q15940 193 aa13.34□□□□□ -0.27
CLK2-202ENST00000361168 ACOT6Q3I5F7 207 aaPredicted RBP13.34□□□□□ -0.27
CLK2-202ENST00000361168 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.34□□□□□ -0.27
CLK2-202ENST00000361168 K7EQG2 157 aa13.33□□□□□ -0.28
CLK2-202ENST00000361168 OR10J4P0C629 311 aa13.33□□□□□ -0.28
CLK2-202ENST00000361168 APRG1Q8IVJ8 170 aa13.33□□□□□ -0.28
CLK2-202ENST00000361168 STOML3Q8TAV4 291 aa13.33□□□□□ -0.28
CLK2-202ENST00000361168 SLC17A3O00476 420 aa13.33□□□□□ -0.28
CLK2-202ENST00000361168 SOCS3O14543 225 aa13.33□□□□□ -0.28
CLK2-202ENST00000361168 ZNF688P0C7X2 276 aa13.33□□□□□ -0.28
CLK2-202ENST00000361168 IGLC2P0DOY2 106 aa13.33□□□□□ -0.28
CLK2-202ENST00000361168 RPL7P18124 248 aaKnown RBP13.33□□□□□ -0.28
CLK2-202ENST00000361168 DEFB125Q8N687 156 aa13.33□□□□□ -0.28
CLK2-202ENST00000361168 TPT1P13693 172 aaKnown RBP13.32□□□□□ -0.28
CLK2-202ENST00000361168 HLA-DMBP28068 263 aa13.32□□□□□ -0.28
CLK2-202ENST00000361168 GALR1P47211 349 aa13.32□□□□□ -0.28
CLK2-202ENST00000361168 BPIFA4PQ86YQ2 179 aa13.32□□□□□ -0.28
CLK2-202ENST00000361168 RAB24Q969Q5 203 aa13.32□□□□□ -0.28
CLK2-202ENST00000361168 CITED4Q96RK1 184 aa13.32□□□□□ -0.28
CLK2-202ENST00000361168 ZNF586Q9NXT0 402 aa13.32□□□□□ -0.28
CLK2-202ENST00000361168 OR4C46A6NHA9 309 aa13.31□□□□□ -0.28
CLK2-202ENST00000361168 CD5P06127 495 aa13.31□□□□□ -0.28
CLK2-202ENST00000361168 RHOBP62745 196 aa13.31□□□□□ -0.28
CLK2-202ENST00000361168 PAFAH1B2P68402 229 aa13.31□□□□□ -0.28
CLK2-202ENST00000361168 TMEM41BQ5BJD5 291 aa13.31□□□□□ -0.28
CLK2-202ENST00000361168 RNF182Q8N6D2 247 aa13.31□□□□□ -0.28
CLK2-202ENST00000361168 COL7A1Q02388 2944 aa13.31□□□□□ -0.28
CLK2-202ENST00000361168 TRAV8-2A0A0B4J237 113 aa13.31□□□□□ -0.28
CLK2-202ENST00000361168 GTSCR1Q86UQ5 136 aa13.31□□□□□ -0.28
CLK2-202ENST00000361168 SLC51BQ86UW2 128 aa13.31□□□□□ -0.28
CLK2-202ENST00000361168 C20orf173Q96LM9 149 aa13.31□□□□□ -0.28
CLK2-202ENST00000361168 MAP6D1Q9H9H5 199 aa13.31□□□□□ -0.28
CLK2-202ENST00000361168 A0A1W2PPV4 95 aa13.3□□□□□ -0.28
CLK2-202ENST00000361168 OR7C2O60412 319 aa13.3□□□□□ -0.28
CLK2-202ENST00000361168 SEC11BP0C7V7 166 aa13.3□□□□□ -0.28
CLK2-202ENST00000361168 CDC34P49427 236 aaPredicted RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 318.5 ms