RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 PCP4P48539 62 aa13.2□□□□□ -0.3
SCAF1-201ENST00000360565 GLMPQ8WWB7 406 aa13.2□□□□□ -0.3
SCAF1-201ENST00000360565 TYMSP04818 313 aa13.2□□□□□ -0.3
SCAF1-201ENST00000360565 ZNF56Q15929 161 aa13.2□□□□□ -0.3
SCAF1-201ENST00000360565 BEND2Q8NDZ0 799 aa13.2□□□□□ -0.3
SCAF1-201ENST00000360565 SNRPD3P62318 126 aaKnown RBP13.2□□□□□ -0.3
SCAF1-201ENST00000360565 DIAPH2-AS1Q14236 149 aa13.2□□□□□ -0.3
SCAF1-201ENST00000360565 RASL11AQ6T310 242 aa13.2□□□□□ -0.3
SCAF1-201ENST00000360565 EML6Q6ZMW3 1958 aa13.19□□□□□ -0.3
SCAF1-201ENST00000360565 IGHV3OR16-12A0A075B7B8 117 aa13.19□□□□□ -0.3
SCAF1-201ENST00000360565 ATP5LO75964 103 aa13.19□□□□□ -0.3
SCAF1-201ENST00000360565 ZNF138P52744 262 aa13.19□□□□□ -0.3
SCAF1-201ENST00000360565 TMEM219Q86XT9 240 aa13.19□□□□□ -0.3
SCAF1-201ENST00000360565 CHCHD1Q96BP2 118 aaKnown RBP13.19□□□□□ -0.3
SCAF1-201ENST00000360565 RPL13AP40429 203 aaKnown RBP13.19□□□□□ -0.3
SCAF1-201ENST00000360565 ZNF833PQ6ZTB9 187 aa13.19□□□□□ -0.3
SCAF1-201ENST00000360565 Q8TAT8 98 aa13.19□□□□□ -0.3
SCAF1-201ENST00000360565 DDB2Q92466 427 aa13.19□□□□□ -0.3
SCAF1-201ENST00000360565 PEF1Q9UBV8 284 aaKnown RBP13.19□□□□□ -0.3
SCAF1-201ENST00000360565 A6NNC1 897 aa13.19□□□□□ -0.3
SCAF1-201ENST00000360565 FBLN7Q53RD9 439 aa13.19□□□□□ -0.3
SCAF1-201ENST00000360565 SPRY4Q9C004 299 aa13.19□□□□□ -0.3
SCAF1-201ENST00000360565 TPSG1Q9NRR2 321 aa13.19□□□□□ -0.3
SCAF1-201ENST00000360565 ADAMTS9Q9P2N4 1935 aa13.19□□□□□ -0.3
SCAF1-201ENST00000360565 FAM181BA6NEQ2 426 aa13.18□□□□□ -0.3
SCAF1-201ENST00000360565 CIDEAO60543 219 aa13.18□□□□□ -0.3
SCAF1-201ENST00000360565 HBDP02042 147 aa13.18□□□□□ -0.3
SCAF1-201ENST00000360565 CACNG7P62955 275 aa13.18□□□□□ -0.3
SCAF1-201ENST00000360565 IGFL4Q6B9Z1 124 aa13.18□□□□□ -0.3
SCAF1-201ENST00000360565 CENPVQ7Z7K6 275 aaPredicted RBP13.18□□□□□ -0.3
SCAF1-201ENST00000360565 TMEM238LA0A1B0GVL6 79 aa13.18□□□□□ -0.3
SCAF1-201ENST00000360565 A6NJY4 79 aa13.18□□□□□ -0.3
SCAF1-201ENST00000360565 LEPP41159 167 aa13.18□□□□□ -0.3
SCAF1-201ENST00000360565 PLP1P60201 277 aa13.18□□□□□ -0.3
SCAF1-201ENST00000360565 C3orf36Q3SXR2 165 aa13.18□□□□□ -0.3
SCAF1-201ENST00000360565 SPRNQ5BIV9 151 aa13.18□□□□□ -0.3
SCAF1-201ENST00000360565 TRAV40A0A0B4J280 105 aa13.18□□□□□ -0.3
SCAF1-201ENST00000360565 PIP4P1Q86T03 277 aa13.18□□□□□ -0.3
SCAF1-201ENST00000360565 IGF2RP11717 2491 aa13.18□□□□□ -0.3
SCAF1-201ENST00000360565 IGHV2-70P01814 119 aa13.17□□□□□ -0.3
SCAF1-201ENST00000360565 TSPOP30536 169 aa13.17□□□□□ -0.3
SCAF1-201ENST00000360565 CRIP3Q6Q6R5 217 aa13.17□□□□□ -0.3
SCAF1-201ENST00000360565 LYZL1Q6UWQ5 148 aa13.17□□□□□ -0.3
SCAF1-201ENST00000360565 H3BVH4 76 aa13.17□□□□□ -0.3
SCAF1-201ENST00000360565 NCR2O95944 276 aa13.17□□□□□ -0.3
SCAF1-201ENST00000360565 ATRXP46100 2492 aa13.17□□□□□ -0.3
SCAF1-201ENST00000360565 PTPN13Q12923 2485 aa13.17□□□□□ -0.3
SCAF1-201ENST00000360565 EVI2AP22794 236 aa13.17□□□□□ -0.3
SCAF1-201ENST00000360565 TEX36Q5VZQ5 186 aa13.17□□□□□ -0.3
SCAF1-201ENST00000360565 SCGB3A1Q96QR1 104 aa13.17□□□□□ -0.3
SCAF1-201ENST00000360565 DKK4Q9UBT3 224 aa13.17□□□□□ -0.3
SCAF1-201ENST00000360565 H7C2G1 150 aa13.17□□□□□ -0.3
SCAF1-201ENST00000360565 WISP2O76076 250 aa13.17□□□□□ -0.3
SCAF1-201ENST00000360565 TOMM40O96008 361 aa13.17□□□□□ -0.3
SCAF1-201ENST00000360565 PRSS2P07478 247 aa13.17□□□□□ -0.3
SCAF1-201ENST00000360565 RNASE4P34096 147 aaKnown RBP13.17□□□□□ -0.3
SCAF1-201ENST00000360565 A8MWP6 167 aa13.16□□□□□ -0.3
SCAF1-201ENST00000360565 TGFAP01135 160 aa13.16□□□□□ -0.3
SCAF1-201ENST00000360565 DMRTC2Q8IXT2 367 aaPredicted RBP13.16□□□□□ -0.3
SCAF1-201ENST00000360565 CEACAM4O75871 244 aa13.16□□□□□ -0.3
SCAF1-201ENST00000360565 LURAP1LQ8IV03 231 aa13.16□□□□□ -0.3
SCAF1-201ENST00000360565 D6R8Y8 96 aa13.16□□□□□ -0.3
SCAF1-201ENST00000360565 PRTN3P24158 256 aa13.16□□□□□ -0.3
SCAF1-201ENST00000360565 EFNA4P52798 201 aa13.16□□□□□ -0.3
SCAF1-201ENST00000360565 PRR20EP86478 221 aa13.16□□□□□ -0.3
SCAF1-201ENST00000360565 PRR20CP86479 221 aa13.16□□□□□ -0.3
SCAF1-201ENST00000360565 PRR20DP86480 221 aa13.16□□□□□ -0.3
SCAF1-201ENST00000360565 PRR20BP86481 221 aa13.16□□□□□ -0.3
SCAF1-201ENST00000360565 PRR20AP86496 221 aa13.16□□□□□ -0.3
SCAF1-201ENST00000360565 POU2AF1Q16633 256 aa13.16□□□□□ -0.3
SCAF1-201ENST00000360565 PPBPP02775 128 aa13.15□□□□□ -0.3
SCAF1-201ENST00000360565 Q0VG73 95 aa13.15□□□□□ -0.3
SCAF1-201ENST00000360565 ZNF124Q15973 351 aa13.15□□□□□ -0.3
SCAF1-201ENST00000360565 MINOS1Q5TGZ0 78 aa13.15□□□□□ -0.3
SCAF1-201ENST00000360565 IFI27L1Q96BM0 104 aa13.15□□□□□ -0.3
SCAF1-201ENST00000360565 MRPL27Q9P0M9 148 aaKnown RBP13.15□□□□□ -0.3
SCAF1-201ENST00000360565 SELENOKQ9Y6D0 94 aa13.15□□□□□ -0.3
SCAF1-201ENST00000360565 MINOS1-NBL1R4GNA1 71 aa13.15□□□□□ -0.3
SCAF1-201ENST00000360565 V9GYV3 84 aa13.15□□□□□ -0.3
SCAF1-201ENST00000360565 PIEZO1Q92508 2521 aa13.15□□□□□ -0.3
SCAF1-201ENST00000360565 OOSP1A8MZH6 123 aa13.15□□□□□ -0.3
SCAF1-201ENST00000360565 NPIPB6E9PJ23 425 aa13.15□□□□□ -0.3
SCAF1-201ENST00000360565 K7EM74 188 aa13.15□□□□□ -0.3
SCAF1-201ENST00000360565 PAX8Q06710 450 aa13.15□□□□□ -0.3
SCAF1-201ENST00000360565 Q6ZPA2 131 aa13.15□□□□□ -0.3
SCAF1-201ENST00000360565 M0R1W7 72 aa13.15□□□□□ -0.3
SCAF1-201ENST00000360565 YPEL3P61236 119 aaPredicted RBP13.15□□□□□ -0.3
SCAF1-201ENST00000360565 NUTF2P61970 127 aaKnown RBP13.15□□□□□ -0.3
SCAF1-201ENST00000360565 TMEM170BQ5T4T1 132 aa13.15□□□□□ -0.31
SCAF1-201ENST00000360565 POLR3KQ9Y2Y1 108 aaPredicted RBP13.15□□□□□ -0.31
SCAF1-201ENST00000360565 NCOR2Q9Y618 2525 aa13.14□□□□□ -0.31
SCAF1-201ENST00000360565 FXYD7P58549 80 aa13.14□□□□□ -0.31
SCAF1-201ENST00000360565 ASPHD1Q5U4P2 390 aa13.14□□□□□ -0.31
SCAF1-201ENST00000360565 Q86TA4 180 aa13.14□□□□□ -0.31
SCAF1-201ENST00000360565 MCRIP2Q9BUT9 160 aaKnown RBP13.14□□□□□ -0.31
SCAF1-201ENST00000360565 PSG3Q16557 428 aa13.14□□□□□ -0.31
SCAF1-201ENST00000360565 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.14□□□□□ -0.31
SCAF1-201ENST00000360565 SMIM13P0DJ93 91 aa13.14□□□□□ -0.31
SCAF1-201ENST00000360565 TTC9CQ8N5M4 171 aa13.14□□□□□ -0.31
SCAF1-201ENST00000360565 C11orf52Q96A22 123 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms