RNA–Protein interactions for RNA: ENST00000359518.7

TRIM3-202, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRIM3, Length 3,042 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-202ENST00000359518 A0A1W2PRD5 423 aa16.52■□□□□ 0.24
TRIM3-202ENST00000359518 A0A1W2PRF3 423 aa16.52■□□□□ 0.24
TRIM3-202ENST00000359518 A0A1W2PRM7 423 aa16.52■□□□□ 0.24
TRIM3-202ENST00000359518 CRYABP02511 175 aaKnown RBP16.52■□□□□ 0.24
TRIM3-202ENST00000359518 MPV17L2Q567V2 206 aa16.52■□□□□ 0.24
TRIM3-202ENST00000359518 LINC00311Q8N616 119 aa16.52■□□□□ 0.24
TRIM3-202ENST00000359518 RNASE6Q93091 150 aaKnown RBP16.52■□□□□ 0.24
TRIM3-202ENST00000359518 TMEM133Q9H2Q1 129 aa16.52■□□□□ 0.24
TRIM3-202ENST00000359518 SIGLEC9Q9Y336 463 aa16.52■□□□□ 0.24
TRIM3-202ENST00000359518 SYS1-DBNDD2H3BUS1 97 aa16.52■□□□□ 0.23
TRIM3-202ENST00000359518 PLGLAQ15195 96 aa16.52■□□□□ 0.23
TRIM3-202ENST00000359518 COTL1Q14019 142 aa16.51■□□□□ 0.23
TRIM3-202ENST00000359518 Q86TA4 180 aa16.51■□□□□ 0.23
TRIM3-202ENST00000359518 SRSF12Q8WXF0 261 aaKnown RBP16.51■□□□□ 0.23
TRIM3-202ENST00000359518 SLC25A39Q9BZJ4 359 aaPredicted RBP16.51■□□□□ 0.23
TRIM3-202ENST00000359518 COX11Q9Y6N1 276 aa16.51■□□□□ 0.23
TRIM3-202ENST00000359518 PPP1R27Q86WC6 154 aa16.5■□□□□ 0.23
TRIM3-202ENST00000359518 ANKHD1Q8IWZ3 2542 aaKnown RBP16.5■□□□□ 0.23
TRIM3-202ENST00000359518 LOC102724200A0A096LPH7 203 aaPredicted RBP16.5■□□□□ 0.23
TRIM3-202ENST00000359518 PRRG2O14669 202 aa16.5■□□□□ 0.23
TRIM3-202ENST00000359518 ZNF738Q8NE65 137 aa16.5■□□□□ 0.23
TRIM3-202ENST00000359518 HTR1DP28221 377 aa16.49■□□□□ 0.23
TRIM3-202ENST00000359518 ORAOV1Q8WV07 137 aa16.49■□□□□ 0.23
TRIM3-202ENST00000359518 TMUB1Q9BVT8 246 aa16.49■□□□□ 0.23
TRIM3-202ENST00000359518 TNFRSF13BO14836 293 aaPredicted RBP16.49■□□□□ 0.23
TRIM3-202ENST00000359518 TEX45Q8NA69 505 aa16.49■□□□□ 0.23
TRIM3-202ENST00000359518 RNASE8Q8TDE3 154 aaKnown RBP16.49■□□□□ 0.23
TRIM3-202ENST00000359518 ARMS2P0C7Q2 107 aa16.48■□□□□ 0.23
TRIM3-202ENST00000359518 IGLC1P0CG04 106 aa16.48■□□□□ 0.23
TRIM3-202ENST00000359518 MUC15Q8N387 334 aa16.48■□□□□ 0.23
TRIM3-202ENST00000359518 F11RQ9Y624 299 aaKnown RBP16.48■□□□□ 0.23
TRIM3-202ENST00000359518 IGHV1-3A0A0C4DH29 117 aa16.48■□□□□ 0.23
TRIM3-202ENST00000359518 SNAI2O43623 268 aa16.48■□□□□ 0.23
TRIM3-202ENST00000359518 NUDT3O95989 172 aa16.48■□□□□ 0.23
TRIM3-202ENST00000359518 FAM71F2Q6NXP2 309 aa16.48■□□□□ 0.23
TRIM3-202ENST00000359518 RASL11BQ9BPW5 248 aa16.48■□□□□ 0.23
TRIM3-202ENST00000359518 SPTBN1Q01082 2364 aaKnown RBP16.48■□□□□ 0.23
TRIM3-202ENST00000359518 CNIH1O95406 144 aa16.48■□□□□ 0.23
TRIM3-202ENST00000359518 KLF17Q5JT82 389 aaPredicted RBP16.48■□□□□ 0.23
TRIM3-202ENST00000359518 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.47■□□□□ 0.23
TRIM3-202ENST00000359518 MUC21A0A0G2JKD1 596 aa16.47■□□□□ 0.23
TRIM3-202ENST00000359518 MUC21A0A140T8X8 626 aa16.47■□□□□ 0.23
TRIM3-202ENST00000359518 TEX22C9J3V5 150 aa16.47■□□□□ 0.23
TRIM3-202ENST00000359518 E7EQL1 145 aa16.47■□□□□ 0.23
TRIM3-202ENST00000359518 IGLV2-11P01706 119 aa16.47■□□□□ 0.23
TRIM3-202ENST00000359518 MUC21Q5SSG8 566 aa16.47■□□□□ 0.23
TRIM3-202ENST00000359518 ZC2HC1AQ96GY0 325 aa16.47■□□□□ 0.23
TRIM3-202ENST00000359518 M0R3E3 92 aa16.47■□□□□ 0.23
TRIM3-202ENST00000359518 ZNF492Q9P255 531 aa16.47■□□□□ 0.23
TRIM3-202ENST00000359518 TMSB15BA0A087X1C1 80 aa16.46■□□□□ 0.23
TRIM3-202ENST00000359518 ZNF785A8K8V0 405 aa16.46■□□□□ 0.23
TRIM3-202ENST00000359518 TCTAP57738 103 aa16.46■□□□□ 0.23
TRIM3-202ENST00000359518 VAMP3Q15836 100 aa16.46■□□□□ 0.23
TRIM3-202ENST00000359518 IGHV1-69-2A0A0G2JMI3 117 aa16.46■□□□□ 0.23
TRIM3-202ENST00000359518 OTORQ9NRC9 128 aa16.46■□□□□ 0.23
TRIM3-202ENST00000359518 UBE2V1Q13404 147 aa16.45■□□□□ 0.22
TRIM3-202ENST00000359518 BCL6BQ8N143 479 aaPredicted RBP16.45■□□□□ 0.22
TRIM3-202ENST00000359518 RPEQ96AT9 228 aa16.45■□□□□ 0.22
TRIM3-202ENST00000359518 SMIM12Q96EX1 92 aa16.45■□□□□ 0.22
TRIM3-202ENST00000359518 IGKV1-17P01599 117 aa16.45■□□□□ 0.22
TRIM3-202ENST00000359518 CT83Q5H943 113 aa16.45■□□□□ 0.22
TRIM3-202ENST00000359518 ASCL5Q7RTU5 278 aa16.45■□□□□ 0.22
TRIM3-202ENST00000359518 CHCHD1Q96BP2 118 aaKnown RBP16.45■□□□□ 0.22
TRIM3-202ENST00000359518 CRYGBP07316 175 aa16.45■□□□□ 0.22
TRIM3-202ENST00000359518 GFRALQ6UXV0 394 aa16.44■□□□□ 0.22
TRIM3-202ENST00000359518 C8orf31Q8N9H6 132 aa16.44■□□□□ 0.22
TRIM3-202ENST00000359518 MAP1LC3CQ9BXW4 147 aa16.44■□□□□ 0.22
TRIM3-202ENST00000359518 AKAP6Q13023 2319 aa16.44■□□□□ 0.22
TRIM3-202ENST00000359518 HSBP1L1C9JCN9 74 aa16.44■□□□□ 0.22
TRIM3-202ENST00000359518 BUB1B-PAK6H3BSN5 160 aa16.44■□□□□ 0.22
TRIM3-202ENST00000359518 ABHD17AQ96GS6 310 aa16.44■□□□□ 0.22
TRIM3-202ENST00000359518 TMEM191AQ9H0A3 160 aa16.44■□□□□ 0.22
TRIM3-202ENST00000359518 CBY3A6NI87 242 aa16.43■□□□□ 0.22
TRIM3-202ENST00000359518 APOHP02749 345 aaPredicted RBP16.43■□□□□ 0.22
TRIM3-202ENST00000359518 LOC389332A0A1B0GUA5 103 aa16.43■□□□□ 0.22
TRIM3-202ENST00000359518 IGLV1-47P01700 117 aa16.43■□□□□ 0.22
TRIM3-202ENST00000359518 FXYD7P58549 80 aa16.43■□□□□ 0.22
TRIM3-202ENST00000359518 RNF151Q2KHN1 245 aa16.43■□□□□ 0.22
TRIM3-202ENST00000359518 FBLN7Q53RD9 439 aa16.43■□□□□ 0.22
TRIM3-202ENST00000359518 PRR30Q53SZ7 412 aaPredicted RBP16.43■□□□□ 0.22
TRIM3-202ENST00000359518 FAM162BQ5T6X4 162 aa16.43■□□□□ 0.22
TRIM3-202ENST00000359518 RALYQ9UKM9 306 aaKnown RBP16.43■□□□□ 0.22
TRIM3-202ENST00000359518 SOX21Q9Y651 276 aaPredicted RBP16.43■□□□□ 0.22
TRIM3-202ENST00000359518 A0A087X0K7 114 aa16.43■□□□□ 0.22
TRIM3-202ENST00000359518 A0A1B0GUT8 65 aa16.43■□□□□ 0.22
TRIM3-202ENST00000359518 VSTM5A8MXK1 200 aa16.43■□□□□ 0.22
TRIM3-202ENST00000359518 I3L2K1 104 aa16.43■□□□□ 0.22
TRIM3-202ENST00000359518 CRXO43186 299 aaPredicted RBP16.43■□□□□ 0.22
TRIM3-202ENST00000359518 LIPFP07098 398 aa16.43■□□□□ 0.22
TRIM3-202ENST00000359518 FOXE3Q13461 319 aa16.43■□□□□ 0.22
TRIM3-202ENST00000359518 SLC25A34Q6PIV7 304 aa16.43■□□□□ 0.22
TRIM3-202ENST00000359518 NDFIP1Q9BT67 221 aa16.43■□□□□ 0.22
TRIM3-202ENST00000359518 NGBQ9NPG2 151 aa16.43■□□□□ 0.22
TRIM3-202ENST00000359518 SHISA9B4DS77 424 aa16.42■□□□□ 0.22
TRIM3-202ENST00000359518 FAM106CPP0CH98 169 aa16.42■□□□□ 0.22
TRIM3-202ENST00000359518 PLP1P60201 277 aa16.42■□□□□ 0.22
TRIM3-202ENST00000359518 FAM106AQ4KMX7 169 aa16.42■□□□□ 0.22
TRIM3-202ENST00000359518 GFRA4Q9GZZ7 299 aa16.42■□□□□ 0.22
TRIM3-202ENST00000359518 ST20Q9HBF5 79 aa16.42■□□□□ 0.22
TRIM3-202ENST00000359518 HILPDAQ9Y5L2 63 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms