RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 SUN5Q8TC36 379 aa10.68□□□□□ -0.7
PDLIM5-203ENST00000359265 MYOZ3Q8TDC0 251 aa10.68□□□□□ -0.7
PDLIM5-203ENST00000359265 C16orf95Q9H693 158 aa10.68□□□□□ -0.7
PDLIM5-203ENST00000359265 ZFAND3Q9H8U3 227 aa10.68□□□□□ -0.7
PDLIM5-203ENST00000359265 TMEM14CQ9P0S9 112 aa10.68□□□□□ -0.7
PDLIM5-203ENST00000359265 CARHSP1Q9Y2V2 147 aaKnown RBP10.68□□□□□ -0.7
PDLIM5-203ENST00000359265 IGHV3-35A0A0C4DH35 117 aa10.67□□□□□ -0.7
PDLIM5-203ENST00000359265 C11orf94C9JXX5 98 aa10.67□□□□□ -0.7
PDLIM5-203ENST00000359265 F6UZH7 168 aa10.67□□□□□ -0.7
PDLIM5-203ENST00000359265 NDUFA4O00483 81 aa10.67□□□□□ -0.7
PDLIM5-203ENST00000359265 RPLP1P05386 114 aaKnown RBP10.67□□□□□ -0.7
PDLIM5-203ENST00000359265 PYYP10082 97 aa10.67□□□□□ -0.7
PDLIM5-203ENST00000359265 ADCYAP1P18509 176 aa10.67□□□□□ -0.7
PDLIM5-203ENST00000359265 C10orf91Q5T1B1 145 aa10.67□□□□□ -0.7
PDLIM5-203ENST00000359265 KLHDC1Q8N7A1 406 aa10.67□□□□□ -0.7
PDLIM5-203ENST00000359265 OR4F5Q8NH21 305 aa10.67□□□□□ -0.7
PDLIM5-203ENST00000359265 ZNF414Q96IQ9 312 aa10.67□□□□□ -0.7
PDLIM5-203ENST00000359265 OR4F4Q96R69 305 aa10.67□□□□□ -0.7
PDLIM5-203ENST00000359265 PEF1Q9UBV8 284 aaKnown RBP10.67□□□□□ -0.7
PDLIM5-203ENST00000359265 A0A1W2PRE2 83 aa10.66□□□□□ -0.7
PDLIM5-203ENST00000359265 ZNF98A6NK75 572 aa10.66□□□□□ -0.7
PDLIM5-203ENST00000359265 FAM74A7A6NL05 159 aa10.66□□□□□ -0.7
PDLIM5-203ENST00000359265 TMEM250H0YL14 139 aa10.66□□□□□ -0.7
PDLIM5-203ENST00000359265 PDE6DO43924 150 aa10.66□□□□□ -0.7
PDLIM5-203ENST00000359265 GGCTO75223 188 aaKnown RBP10.66□□□□□ -0.7
PDLIM5-203ENST00000359265 TRBV12-3P01733 135 aa10.66□□□□□ -0.7
PDLIM5-203ENST00000359265 GP9P14770 177 aa10.66□□□□□ -0.7
PDLIM5-203ENST00000359265 ATP5G3P48201 142 aa10.66□□□□□ -0.7
PDLIM5-203ENST00000359265 CD81P60033 236 aa10.66□□□□□ -0.7
PDLIM5-203ENST00000359265 SOHLH1Q5JUK2 328 aa10.66□□□□□ -0.7
PDLIM5-203ENST00000359265 LEMD1Q68G75 181 aa10.66□□□□□ -0.7
PDLIM5-203ENST00000359265 C12orf54Q6X4T0 127 aa10.66□□□□□ -0.7
PDLIM5-203ENST00000359265 BPIFA4PQ86YQ2 179 aa10.66□□□□□ -0.7
PDLIM5-203ENST00000359265 CYB561D1Q8N8Q1 229 aa10.66□□□□□ -0.7
PDLIM5-203ENST00000359265 FXYD5Q96DB9 178 aa10.66□□□□□ -0.7
PDLIM5-203ENST00000359265 UBE2E2Q96LR5 201 aa10.66□□□□□ -0.7
PDLIM5-203ENST00000359265 METTL26Q96S19 204 aa10.66□□□□□ -0.7
PDLIM5-203ENST00000359265 YTHDF2Q9Y5A9 579 aaKnown RBP10.66□□□□□ -0.7
PDLIM5-203ENST00000359265 APOC3P02656 99 aa10.65□□□□□ -0.7
PDLIM5-203ENST00000359265 LGALS1P09382 135 aaKnown RBP10.65□□□□□ -0.7
PDLIM5-203ENST00000359265 CEBPGP53567 150 aa10.65□□□□□ -0.7
PDLIM5-203ENST00000359265 KIAA0141Q14154 515 aaPredicted RBP10.65□□□□□ -0.7
PDLIM5-203ENST00000359265 OR4F17Q8NGA8 305 aa10.65□□□□□ -0.7
PDLIM5-203ENST00000359265 NKX6-2Q9C056 277 aaPredicted RBP10.65□□□□□ -0.7
PDLIM5-203ENST00000359265 IGHV3OR16-8A0A075B7F1 116 aa10.64□□□□□ -0.71
PDLIM5-203ENST00000359265 HIST1H1EP10412 219 aaKnown RBP10.64□□□□□ -0.71
PDLIM5-203ENST00000359265 RPL7P18124 248 aaKnown RBP10.64□□□□□ -0.71
PDLIM5-203ENST00000359265 SVBPQ8N300 66 aa10.64□□□□□ -0.71
PDLIM5-203ENST00000359265 TMEM190Q8WZ59 177 aa10.64□□□□□ -0.71
PDLIM5-203ENST00000359265 OR5B12Q96R08 314 aa10.64□□□□□ -0.71
PDLIM5-203ENST00000359265 C20orf24Q9BUV8 137 aa10.64□□□□□ -0.71
PDLIM5-203ENST00000359265 RYR3Q15413 4870 aa10.64□□□□□ -0.71
PDLIM5-203ENST00000359265 KMT2CQ8NEZ4 4911 aaKnown RBP10.63□□□□□ -0.71
PDLIM5-203ENST00000359265 A0A1B0GUS0 222 aa10.63□□□□□ -0.71
PDLIM5-203ENST00000359265 NBEAP1P0C6P0 100 aa10.63□□□□□ -0.71
PDLIM5-203ENST00000359265 NPPCP23582 126 aa10.63□□□□□ -0.71
PDLIM5-203ENST00000359265 FAM90A2PQ658T7 463 aa10.63□□□□□ -0.71
PDLIM5-203ENST00000359265 LINC01006Q8NI28 216 aa10.63□□□□□ -0.71
PDLIM5-203ENST00000359265 BLNKQ8WV28 456 aa10.63□□□□□ -0.71
PDLIM5-203ENST00000359265 GPR82Q96P67 336 aa10.63□□□□□ -0.71
PDLIM5-203ENST00000359265 CLPSL1A2RUU4 121 aa10.62□□□□□ -0.71
PDLIM5-203ENST00000359265 SNAPINO95295 136 aa10.62□□□□□ -0.71
PDLIM5-203ENST00000359265 CRYBB3P26998 211 aa10.62□□□□□ -0.71
PDLIM5-203ENST00000359265 RPEL1Q2QD12 228 aa10.62□□□□□ -0.71
PDLIM5-203ENST00000359265 FAM106AQ4KMX7 169 aa10.62□□□□□ -0.71
PDLIM5-203ENST00000359265 FAM74A3Q4VXF1 159 aa10.62□□□□□ -0.71
PDLIM5-203ENST00000359265 KHDC1LQ5JSQ8 128 aa10.62□□□□□ -0.71
PDLIM5-203ENST00000359265 C1orf194Q5T5A4 169 aa10.62□□□□□ -0.71
PDLIM5-203ENST00000359265 CCDC28AQ8IWP9 274 aa10.62□□□□□ -0.71
PDLIM5-203ENST00000359265 OR8I2Q8N0Y5 310 aa10.62□□□□□ -0.71
PDLIM5-203ENST00000359265 C11orf52Q96A22 123 aa10.62□□□□□ -0.71
PDLIM5-203ENST00000359265 ZNF586Q9NXT0 402 aa10.62□□□□□ -0.71
PDLIM5-203ENST00000359265 SCO2A0A1W2PP80 73 aa10.61□□□□□ -0.71
PDLIM5-203ENST00000359265 ZNF727A8MUV8 499 aa10.61□□□□□ -0.71
PDLIM5-203ENST00000359265 GGTLC3B5MD39 225 aa10.61□□□□□ -0.71
PDLIM5-203ENST00000359265 MRPS12O15235 138 aaKnown RBP10.61□□□□□ -0.71
PDLIM5-203ENST00000359265 ZNF207O43670 478 aaKnown RBP10.61□□□□□ -0.71
PDLIM5-203ENST00000359265 BUB3O43684 328 aa10.61□□□□□ -0.71
PDLIM5-203ENST00000359265 IGLC2P0DOY2 106 aa10.61□□□□□ -0.71
PDLIM5-203ENST00000359265 ATF4P18848 351 aaPredicted RBP10.61□□□□□ -0.71
PDLIM5-203ENST00000359265 CDX1P47902 265 aaPredicted RBP10.61□□□□□ -0.71
PDLIM5-203ENST00000359265 GUCA2BQ16661 112 aa10.61□□□□□ -0.71
PDLIM5-203ENST00000359265 GPHB5Q86YW7 130 aa10.61□□□□□ -0.71
PDLIM5-203ENST00000359265 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.61□□□□□ -0.71
PDLIM5-203ENST00000359265 WIPF2Q8TF74 440 aaPredicted RBP10.61□□□□□ -0.71
PDLIM5-203ENST00000359265 C4orf3Q8WVX3 66 aa10.61□□□□□ -0.71
PDLIM5-203ENST00000359265 WFDC12Q8WWY7 111 aa10.61□□□□□ -0.71
PDLIM5-203ENST00000359265 RPUSD4Q96CM3 377 aaKnown RBP10.61□□□□□ -0.71
PDLIM5-203ENST00000359265 GRAMD2BQ96HH9 432 aa10.61□□□□□ -0.71
PDLIM5-203ENST00000359265 TCEAL7Q9BRU2 100 aa10.61□□□□□ -0.71
PDLIM5-203ENST00000359265 NIPSNAP3BQ9BS92 247 aa10.61□□□□□ -0.71
PDLIM5-203ENST00000359265 PARLQ9H300 379 aa10.61□□□□□ -0.71
PDLIM5-203ENST00000359265 RNF114Q9Y508 228 aa10.61□□□□□ -0.71
PDLIM5-203ENST00000359265 U3KQE9 123 aa10.61□□□□□ -0.71
PDLIM5-203ENST00000359265 ZNF320A2RRD8 509 aa10.6□□□□□ -0.71
PDLIM5-203ENST00000359265 H3BQ15 152 aa10.6□□□□□ -0.71
PDLIM5-203ENST00000359265 GALR1P47211 349 aa10.6□□□□□ -0.71
PDLIM5-203ENST00000359265 RANP62826 216 aaKnown RBP10.6□□□□□ -0.71
PDLIM5-203ENST00000359265 SUMO1P63165 101 aaKnown RBP10.6□□□□□ -0.71
PDLIM5-203ENST00000359265 PDE6HQ13956 83 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms