RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 IGKV1-5P01602 117 aa15□□□□□ -0.01
SHANK1-202ENST00000359082 SSBP2P81877 361 aaPredicted RBP15□□□□□ -0.01
SHANK1-202ENST00000359082 MYOFQ9NZM1 2061 aa15□□□□□ -0.01
SHANK1-202ENST00000359082 FAM223BA6NKX1 122 aa15□□□□□ -0.01
SHANK1-202ENST00000359082 FAM223AQ8IWN6 122 aa15□□□□□ -0.01
SHANK1-202ENST00000359082 CITED2Q99967 270 aaPredicted RBP15□□□□□ -0.01
SHANK1-202ENST00000359082 DOCK3Q8IZD9 2030 aa15□□□□□ -0.01
SHANK1-202ENST00000359082 NYNRINQ9P2P1 1898 aaKnown RBP15□□□□□ -0.01
SHANK1-202ENST00000359082 SS18Q15532 418 aa14.99□□□□□ -0.01
SHANK1-202ENST00000359082 C5orf64Q2M2E5 130 aa14.99□□□□□ -0.01
SHANK1-202ENST00000359082 LINC01551Q86U37 167 aa14.99□□□□□ -0.01
SHANK1-202ENST00000359082 DEFB130BP0DP73 79 aa14.99□□□□□ -0.01
SHANK1-202ENST00000359082 DEFB130AP0DP74 79 aa14.99□□□□□ -0.01
SHANK1-202ENST00000359082 NTF4P34130 210 aa14.99□□□□□ -0.01
SHANK1-202ENST00000359082 GAGE2AQ6NT46 116 aa14.99□□□□□ -0.01
SHANK1-202ENST00000359082 LYPD2Q6UXB3 125 aa14.99□□□□□ -0.01
SHANK1-202ENST00000359082 C5orf63A6NC05 138 aa14.99□□□□□ -0.01
SHANK1-202ENST00000359082 LINC00473A8K010 186 aa14.99□□□□□ -0.01
SHANK1-202ENST00000359082 COL8A2P25067 703 aa14.99□□□□□ -0.01
SHANK1-202ENST00000359082 RPRMLQ8N4K4 120 aa14.99□□□□□ -0.01
SHANK1-202ENST00000359082 TIMM21Q9BVV7 248 aa14.99□□□□□ -0.01
SHANK1-202ENST00000359082 SUPT4H1P63272 117 aaKnown RBP14.98□□□□□ -0.01
SHANK1-202ENST00000359082 CFHR3Q02985 330 aa14.98□□□□□ -0.01
SHANK1-202ENST00000359082 RASL11AQ6T310 242 aa14.98□□□□□ -0.01
SHANK1-202ENST00000359082 M0R1W7 72 aa14.98□□□□□ -0.01
SHANK1-202ENST00000359082 IL18BPO95998 194 aa14.98□□□□□ -0.01
SHANK1-202ENST00000359082 TMEM256Q8N2U0 113 aa14.98□□□□□ -0.01
SHANK1-202ENST00000359082 ASXL3Q9C0F0 2248 aa14.98□□□□□ -0.01
SHANK1-202ENST00000359082 MST1P26927 711 aa14.98□□□□□ -0.01
SHANK1-202ENST00000359082 C20orf204Q6ZNR8 217 aa14.98□□□□□ -0.01
SHANK1-202ENST00000359082 LINC01559Q495D7 138 aa14.97□□□□□ -0.01
SHANK1-202ENST00000359082 MSRB2Q9Y3D2 182 aa14.97□□□□□ -0.01
SHANK1-202ENST00000359082 MDC1Q14676 2089 aaKnown RBP14.97□□□□□ -0.01
SHANK1-202ENST00000359082 LY6HO94772 140 aa14.97□□□□□ -0.01
SHANK1-202ENST00000359082 RHPN1-AS1Q9BWJ2 59 aa14.97□□□□□ -0.01
SHANK1-202ENST00000359082 RUSC1-AS1Q66K80 236 aa14.97□□□□□ -0.01
SHANK1-202ENST00000359082 DOCK4Q8N1I0 1966 aa14.97□□□□□ -0.01
SHANK1-202ENST00000359082 SIPA1L1O43166 1804 aa14.97□□□□□ -0.01
SHANK1-202ENST00000359082 MYMXA0A1B0GTQ4 84 aa14.97□□□□□ -0.01
SHANK1-202ENST00000359082 RPL32P62910 135 aaKnown RBP14.97□□□□□ -0.01
SHANK1-202ENST00000359082 ZNF581Q9P0T4 197 aa14.97□□□□□ -0.01
SHANK1-202ENST00000359082 NEUROG3Q9Y4Z2 214 aa14.97□□□□□ -0.01
SHANK1-202ENST00000359082 HEATR5BQ9P2D3 2071 aa14.97□□□□□ -0.01
SHANK1-202ENST00000359082 AMN1Q8IY45 258 aa14.96□□□□□ -0.01
SHANK1-202ENST00000359082 PNRC2Q9NPJ4 139 aaKnown RBP14.96□□□□□ -0.01
SHANK1-202ENST00000359082 SIGLEC9Q9Y336 463 aa14.96□□□□□ -0.01
SHANK1-202ENST00000359082 RNF144BQ7Z419 303 aa14.96□□□□□ -0.01
SHANK1-202ENST00000359082 USMG5Q96IX5 58 aa14.96□□□□□ -0.01
SHANK1-202ENST00000359082 SPTBP11277 2137 aa14.96□□□□□ -0.01
SHANK1-202ENST00000359082 DLX4Q92988 240 aaPredicted RBP14.96□□□□□ -0.02
SHANK1-202ENST00000359082 RNF5Q99942 180 aa14.96□□□□□ -0.02
SHANK1-202ENST00000359082 CLPSP04118 112 aa14.95□□□□□ -0.02
SHANK1-202ENST00000359082 LHFPL1Q86WI0 220 aa14.95□□□□□ -0.02
SHANK1-202ENST00000359082 ANAPC10Q9UM13 185 aa14.95□□□□□ -0.02
SHANK1-202ENST00000359082 SYNJ2BPP57105 145 aa14.95□□□□□ -0.02
SHANK1-202ENST00000359082 RPP25LQ8N5L8 163 aaKnown RBP14.95□□□□□ -0.02
SHANK1-202ENST00000359082 RNF166Q96A37 237 aaPredicted RBP14.95□□□□□ -0.02
SHANK1-202ENST00000359082 ESDP10768 282 aa14.95□□□□□ -0.02
SHANK1-202ENST00000359082 LURAP1LQ8IV03 231 aa14.95□□□□□ -0.02
SHANK1-202ENST00000359082 LINC01356Q8N9X3 169 aa14.95□□□□□ -0.02
SHANK1-202ENST00000359082 DKK1O94907 266 aa14.95□□□□□ -0.02
SHANK1-202ENST00000359082 Q6P435 159 aa14.95□□□□□ -0.02
SHANK1-202ENST00000359082 PRIMA1Q86XR5 153 aa14.95□□□□□ -0.02
SHANK1-202ENST00000359082 KLF12Q9Y4X4 402 aa14.95□□□□□ -0.02
SHANK1-202ENST00000359082 MLANAQ16655 118 aa14.95□□□□□ -0.02
SHANK1-202ENST00000359082 KIR3DS1Q14943 382 aa14.94□□□□□ -0.02
SHANK1-202ENST00000359082 NMSQ5H8A3 153 aa14.94□□□□□ -0.02
SHANK1-202ENST00000359082 A0A1B0GW64 132 aa14.94□□□□□ -0.02
SHANK1-202ENST00000359082 OOSP1A8MZH6 123 aa14.94□□□□□ -0.02
SHANK1-202ENST00000359082 C3orf79P0CE67 100 aa14.94□□□□□ -0.02
SHANK1-202ENST00000359082 OVOL2Q9BRP0 275 aa14.94□□□□□ -0.02
SHANK1-202ENST00000359082 IGKV1D-17A0A075B6S4 117 aa14.94□□□□□ -0.02
SHANK1-202ENST00000359082 SYS1-DBNDD2H3BUS1 97 aa14.94□□□□□ -0.02
SHANK1-202ENST00000359082 IL17RELQ6ZVW7 336 aa14.94□□□□□ -0.02
SHANK1-202ENST00000359082 C8orf49Q96NF6 230 aa14.94□□□□□ -0.02
SHANK1-202ENST00000359082 TMEM14EPQ6UXP3 125 aa14.93□□□□□ -0.02
SHANK1-202ENST00000359082 C1QTNF4Q9BXJ3 329 aa14.93□□□□□ -0.02
SHANK1-202ENST00000359082 IGHV3-16A0A0C4DH30 117 aa14.93□□□□□ -0.02
SHANK1-202ENST00000359082 A0A0G2JMZ2 1700 aa14.93□□□□□ -0.02
SHANK1-202ENST00000359082 LRRC37A2A6NM11 1700 aa14.93□□□□□ -0.02
SHANK1-202ENST00000359082 KNCNA6PVL3 124 aa14.92□□□□□ -0.02
SHANK1-202ENST00000359082 GAS1P54826 345 aa14.92□□□□□ -0.02
SHANK1-202ENST00000359082 BPESC1Q9GZL8 116 aa14.92□□□□□ -0.02
SHANK1-202ENST00000359082 SAA4P35542 130 aa14.92□□□□□ -0.02
SHANK1-202ENST00000359082 MPV17L2Q567V2 206 aa14.92□□□□□ -0.02
SHANK1-202ENST00000359082 TRAV1-1A0A0B4J248 108 aa14.92□□□□□ -0.02
SHANK1-202ENST00000359082 OVOL3O00110 214 aa14.92□□□□□ -0.02
SHANK1-202ENST00000359082 ZNF114Q8NC26 417 aa14.92□□□□□ -0.02
SHANK1-202ENST00000359082 KLHDC3Q9BQ90 382 aa14.92□□□□□ -0.02
SHANK1-202ENST00000359082 NDUFS6O75380 124 aaKnown RBP14.92□□□□□ -0.02
SHANK1-202ENST00000359082 DEFB131AP59861 70 aa14.92□□□□□ -0.02
SHANK1-202ENST00000359082 Q86TA4 180 aa14.92□□□□□ -0.02
SHANK1-202ENST00000359082 CHAC1Q9BUX1 264 aa14.92□□□□□ -0.02
SHANK1-202ENST00000359082 GTSF1LQ9H1H1 148 aa14.92□□□□□ -0.02
SHANK1-202ENST00000359082 UBE2V1Q13404 147 aa14.92□□□□□ -0.02
SHANK1-202ENST00000359082 REG4Q9BYZ8 158 aa14.91□□□□□ -0.02
SHANK1-202ENST00000359082 ZNRD1Q9P1U0 126 aa14.91□□□□□ -0.02
SHANK1-202ENST00000359082 PYY3Q5JQD4 70 aa14.91□□□□□ -0.02
SHANK1-202ENST00000359082 KLK9Q9UKQ9 250 aa14.91□□□□□ -0.02
SHANK1-202ENST00000359082 DNAJC30Q96LL9 226 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms