RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 F2Z2F3 143 aa4.73□□□□□ -1.65
BRCA1-203ENST00000357654 TMEM178BH3BS89 294 aa4.73□□□□□ -1.65
BRCA1-203ENST00000357654 PROP1O75360 226 aa4.73□□□□□ -1.65
BRCA1-203ENST00000357654 WISP1O95388 367 aa4.73□□□□□ -1.65
BRCA1-203ENST00000357654 NPSP0C0P6 89 aa4.73□□□□□ -1.65
BRCA1-203ENST00000357654 SAXO1Q8IYX7 474 aa4.73□□□□□ -1.65
BRCA1-203ENST00000357654 CD177Q8N6Q3 437 aa4.73□□□□□ -1.65
BRCA1-203ENST00000357654 MPLKIPQ8TAP9 179 aa4.73□□□□□ -1.65
BRCA1-203ENST00000357654 GNB1LQ9BYB4 327 aa4.73□□□□□ -1.65
BRCA1-203ENST00000357654 KIAA1551Q9HCM1 1747 aa4.73□□□□□ -1.65
BRCA1-203ENST00000357654 PAPPA2Q9BXP8 1791 aa4.73□□□□□ -1.65
BRCA1-203ENST00000357654 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.73□□□□□ -1.65
BRCA1-203ENST00000357654 GYPEP15421 78 aa4.73□□□□□ -1.65
BRCA1-203ENST00000357654 EFNB3Q15768 340 aa4.73□□□□□ -1.65
BRCA1-203ENST00000357654 Q6AWC8 147 aa4.73□□□□□ -1.65
BRCA1-203ENST00000357654 MYH7BA7E2Y1 1941 aa4.73□□□□□ -1.65
BRCA1-203ENST00000357654 IGKV1-6A0A0C4DH72 117 aa4.73□□□□□ -1.65
BRCA1-203ENST00000357654 IGF2-ASQ6U949 168 aa4.73□□□□□ -1.65
BRCA1-203ENST00000357654 TRPT1Q86TN4 253 aaKnown RBP4.73□□□□□ -1.65
BRCA1-203ENST00000357654 PCP2Q8IVA1 136 aa4.73□□□□□ -1.65
BRCA1-203ENST00000357654 APC2O95996 2303 aa4.72□□□□□ -1.65
BRCA1-203ENST00000357654 SCN8AQ9UQD0 1980 aa4.72□□□□□ -1.65
BRCA1-203ENST00000357654 BRWD1Q9NSI6 2320 aa4.72□□□□□ -1.65
BRCA1-203ENST00000357654 A0A1B0GW64 132 aa4.72□□□□□ -1.65
BRCA1-203ENST00000357654 IQCF6A8MYZ5 107 aa4.72□□□□□ -1.65
BRCA1-203ENST00000357654 HLA-DRB4P13762 266 aa4.72□□□□□ -1.65
BRCA1-203ENST00000357654 MORN2Q502X0 79 aa4.72□□□□□ -1.65
BRCA1-203ENST00000357654 RPP25LQ8N5L8 163 aaKnown RBP4.72□□□□□ -1.65
BRCA1-203ENST00000357654 ZNF837Q96EG3 531 aaPredicted RBP4.72□□□□□ -1.65
BRCA1-203ENST00000357654 HLA-DRB4X5D2U9 266 aa4.72□□□□□ -1.65
BRCA1-203ENST00000357654 NHSQ6T4R5 1651 aa4.72□□□□□ -1.65
BRCA1-203ENST00000357654 K7ERS5 55 aa4.72□□□□□ -1.65
BRCA1-203ENST00000357654 ATP6V0E1O15342 81 aa4.72□□□□□ -1.65
BRCA1-203ENST00000357654 IGHV4-30-4P0DP06 118 aa4.72□□□□□ -1.65
BRCA1-203ENST00000357654 IGHV4-31P0DP07 118 aa4.72□□□□□ -1.65
BRCA1-203ENST00000357654 LIME1Q9H400 295 aa4.72□□□□□ -1.65
BRCA1-203ENST00000357654 IGKV1D-13A0A0B4J2D9 117 aa4.72□□□□□ -1.65
BRCA1-203ENST00000357654 IGKV1-13P0DP09 117 aa4.72□□□□□ -1.65
BRCA1-203ENST00000357654 A0A087WZ39 114 aa4.72□□□□□ -1.65
BRCA1-203ENST00000357654 A0A1B0GW15 77 aa4.72□□□□□ -1.65
BRCA1-203ENST00000357654 G3V318 75 aa4.72□□□□□ -1.65
BRCA1-203ENST00000357654 IRF3Q14653 427 aa4.72□□□□□ -1.65
BRCA1-203ENST00000357654 ZNF664Q8N3J9 261 aa4.72□□□□□ -1.65
BRCA1-203ENST00000357654 LINC01465Q8N7H1 131 aa4.72□□□□□ -1.65
BRCA1-203ENST00000357654 TRAV26-2A0A0B4J265 109 aa4.72□□□□□ -1.65
BRCA1-203ENST00000357654 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.72□□□□□ -1.65
BRCA1-203ENST00000357654 Q96M66 194 aa4.72□□□□□ -1.65
BRCA1-203ENST00000357654 EIF4EBP2Q13542 120 aaPredicted RBP4.71□□□□□ -1.65
BRCA1-203ENST00000357654 RNF144BQ7Z419 303 aa4.71□□□□□ -1.65
BRCA1-203ENST00000357654 CRYGNQ8WXF5 182 aa4.71□□□□□ -1.65
BRCA1-203ENST00000357654 NDUFA12Q9UI09 145 aa4.71□□□□□ -1.65
BRCA1-203ENST00000357654 CHCHD2Q9Y6H1 151 aaPredicted RBP4.71□□□□□ -1.65
BRCA1-203ENST00000357654 BUB1B-PAK6H3BSN5 160 aa4.71□□□□□ -1.66
BRCA1-203ENST00000357654 LIMS2Q7Z4I7 341 aa4.71□□□□□ -1.66
BRCA1-203ENST00000357654 C5orf38Q86SI9 138 aa4.71□□□□□ -1.66
BRCA1-203ENST00000357654 ZNF319Q9P2F9 582 aa4.71□□□□□ -1.66
BRCA1-203ENST00000357654 TP53TG1Q9Y2A0 90 aa4.71□□□□□ -1.66
BRCA1-203ENST00000357654 IGLV3-16A0A075B6K0 115 aa4.71□□□□□ -1.66
BRCA1-203ENST00000357654 CD59P13987 128 aa4.71□□□□□ -1.66
BRCA1-203ENST00000357654 FOXE3Q13461 319 aa4.71□□□□□ -1.66
BRCA1-203ENST00000357654 MINOS1Q5TGZ0 78 aa4.71□□□□□ -1.66
BRCA1-203ENST00000357654 MINOS1-NBL1R4GNA1 71 aa4.71□□□□□ -1.66
BRCA1-203ENST00000357654 V9GYH0 126 aa4.71□□□□□ -1.66
BRCA1-203ENST00000357654 ZNF318Q5VUA4 2279 aa4.71□□□□□ -1.66
BRCA1-203ENST00000357654 CACNA1GO43497 2377 aa4.71□□□□□ -1.66
BRCA1-203ENST00000357654 IGHV1-69DA0A0B4J2H0 117 aa4.71□□□□□ -1.66
BRCA1-203ENST00000357654 IGHV1-69P01742 117 aa4.71□□□□□ -1.66
BRCA1-203ENST00000357654 SPINK6Q6UWN8 80 aa4.71□□□□□ -1.66
BRCA1-203ENST00000357654 BOD1L2Q8IYS8 172 aa4.71□□□□□ -1.66
BRCA1-203ENST00000357654 IL17DQ8TAD2 202 aa4.71□□□□□ -1.66
BRCA1-203ENST00000357654 MRPL36Q9P0J6 103 aaKnown RBP4.71□□□□□ -1.66
BRCA1-203ENST00000357654 TDRD6O60522 2096 aaKnown RBP4.71□□□□□ -1.66
BRCA1-203ENST00000357654 FUSP35637 526 aaKnown RBP eCLIP4.71□□□□□ -1.66
BRCA1-203ENST00000357654 ODF1Q14990 250 aa4.71□□□□□ -1.66
BRCA1-203ENST00000357654 DEFB135Q30KP9 77 aa4.71□□□□□ -1.66
BRCA1-203ENST00000357654 TRIP11Q15643 1979 aa4.71□□□□□ -1.66
BRCA1-203ENST00000357654 CASP8AP2Q9UKL3 1982 aa4.71□□□□□ -1.66
BRCA1-203ENST00000357654 SCN1AP35498 2009 aa4.71□□□□□ -1.66
BRCA1-203ENST00000357654 IGHV1-24A0A0C4DH33 117 aa4.71□□□□□ -1.66
BRCA1-203ENST00000357654 SHISA9B4DS77 424 aa4.71□□□□□ -1.66
BRCA1-203ENST00000357654 FAM120AOSQ5T036 256 aa4.71□□□□□ -1.66
BRCA1-203ENST00000357654 C9orf139Q6ZV77 190 aa4.71□□□□□ -1.66
BRCA1-203ENST00000357654 SPART-AS1P0CW21 52 aa4.7□□□□□ -1.66
BRCA1-203ENST00000357654 CDKN1BP46527 198 aa4.7□□□□□ -1.66
BRCA1-203ENST00000357654 CD200R1LQ6Q8B3 271 aa4.7□□□□□ -1.66
BRCA1-203ENST00000357654 SMAD5-AS1Q9Y6J3 95 aa4.7□□□□□ -1.66
BRCA1-203ENST00000357654 TMEM14DPA8MWL7 114 aa4.7□□□□□ -1.66
BRCA1-203ENST00000357654 I3L3M4 83 aa4.7□□□□□ -1.66
BRCA1-203ENST00000357654 IGHG2P01859 326 aa4.7□□□□□ -1.66
BRCA1-203ENST00000357654 SLURP1P55000 103 aa4.7□□□□□ -1.66
BRCA1-203ENST00000357654 FAM110AQ9BQ89 295 aa4.7□□□□□ -1.66
BRCA1-203ENST00000357654 ICE1Q9Y2F5 2266 aa4.7□□□□□ -1.66
BRCA1-203ENST00000357654 RGPD5Q99666 1765 aa4.7□□□□□ -1.66
BRCA1-203ENST00000357654 IGLV3-9A0A075B6K5 115 aa4.7□□□□□ -1.66
BRCA1-203ENST00000357654 C5orf64Q2M2E5 130 aa4.7□□□□□ -1.66
BRCA1-203ENST00000357654 FAM90A1Q86YD7 464 aa4.7□□□□□ -1.66
BRCA1-203ENST00000357654 TMEM14BQ9NUH8 114 aa4.7□□□□□ -1.66
BRCA1-203ENST00000357654 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.7□□□□□ -1.66
BRCA1-203ENST00000357654 IGKV2-29A2NJV5 120 aaPredicted RBP4.7□□□□□ -1.66
BRCA1-203ENST00000357654 NDUFS8O00217 210 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms